| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158421883
Identifier: 158421883
GI number: 158421883
Start: 303989
End: 305386
Strand: Reverse
Name: 158421883
Synonym: AZC_0259
Alternate gene names: NA
Gene position: 305386-303989 (Counterclockwise)
Preceding gene: 158421884
Following gene: 158421882
Centisome position: 5.69
GC content: 73.1
Gene sequence:
>1398_bases GTGCCGTTCGCTCAGCGAAGGCGGATGAAACAAGGTGGTGAGCGGGCGCCGGCCGCCCCGAAGCCGCCTGAATCAGAGCG ACGGATCAGCTTTCCGGCGGTCCGGACCCAACTGGCGGCGAGGAGGCCCATGGCGAGCAAGAACCCCACCTCCAAGGCAG CGGCGGAGGCTTCCTCCAAGGCGGACGATGCGCCGAAGGCGCCGCAGCCGGAGACCTCGGCGCCCGAAACCGCAGCCGCC CCCGTTTCCGCGCCGGAGCCCGTGACGCTGGAAGAAACCGCCGCGCCCGACACGCCCCCCAAAGTGGAAGCCGCGGCGTC CGCCGAAGCCGCTTCCTCCGCGAGCGCACCCGTCAGCCCCGCCGAGGCCGCGGCGCGCGACATGGTGGTCGAGCCCGACG CCTATGAGGAGGCCGACGCCGCCGAACCGCCGATCCCGGTTGTGCGCGCGCCCCGCCCCTCGCCCTTCGTACCCATTCTC TCGGGCGCGCTCGCCGGCGCCGTGGTTGCGGTGGCGGCCGCGTGGGTCTTTACCCATTATGTGCCTCCGCCTGCGCAGGG CGTCTCCGGCGGCCGGCTGGATGCGCTGGAAATCGACGTGGCGCGCGACCGCGCCGCGGCGACACAGCGGATCGAGAAGA TCGAAGCCGCGCTGCGTGCCCAGTCCCCCGCGCAGGATCTCCAGCCGATCGCCTCCGGCCTTGCAAAGGCCACCAGCGAT ATCGCCGCGCTCCGGGCCGAACAGCAGAAGCTCGCGGCCGCCCTGCAATCGGGCGTCGATGCGGCGAAGGCGCAGGCGGG CGATCTGCGCTCGGCCGTGGATGCCGCGCAGAAGAAGCTCGAGACGCTCGCCACCACAACGCAGGCGCTCGACCGCGCGT CTGCCTCGGTGGCCGTGCTCGCCGTGCTGCGCGACGCCATCGTCTCCGGACGTCCCTTCGCTACGGAGCTGGAGGCCGCC CGTGCGGTCGCCGGACCGAAGGCCGCCACGCTCGATCCCTTCGCCAGTGCTGCCGGCCGGGGCTATGGCTCCACCGCCGC CCTCGCCAAGCGTCTCTCTGATGAGGGCGCGACCGCACTCGCGGGCGAAGCCTCCACCGGCCCCACGGGCAGCGGCGTCG TGAACCGCCTGCTCTCGGGCGCGGAAAGCCTCGTGCGGGTCACGCCGCCCGGCGGCACCAGCGCTGCCCCTTCCGAGGAG ACGCTCCAGAAGGCGGTGGCTACCCTTCAGGCCGGCGATGCTGATGGCGCGCTCGCCGCGCTGGCGACGCTGCCGGAGGG CGCGCGCCAGAAGCTCCAGCCGGTGGTGAGCGCCATTCAAGGCCGGCGGGATGCCGCCAATGCCGCCTCCGCCCTGTTCC AGCAGGCGCTCGCCGCCATTTCCGGGAAGACGCCGTGA
Upstream 100 bases:
>100_bases CGGTGGCGGCCCCGCTGCGGGCGCTGGGGGCGACAACAGAGGTCTCACAAACTCCCGATGAGGACGCGCTGCTGACTTTG CTATAAGGCTTCTAGGAAAC
Downstream 100 bases:
>100_bases TTCGCCTCGTTCTCTTCCTCATCGTCCTTGCCGCCATCGCCTTCGGCGCCTCCTGGCTCGCGGACCGGCCCGGCGAGATG CTCGTGGTCTGGCAGGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MPFAQRRRMKQGGERAPAAPKPPESERRISFPAVRTQLAARRPMASKNPTSKAAAEASSKADDAPKAPQPETSAPETAAA PVSAPEPVTLEETAAPDTPPKVEAAASAEAASSASAPVSPAEAAARDMVVEPDAYEEADAAEPPIPVVRAPRPSPFVPIL SGALAGAVVAVAAAWVFTHYVPPPAQGVSGGRLDALEIDVARDRAAATQRIEKIEAALRAQSPAQDLQPIASGLAKATSD IAALRAEQQKLAAALQSGVDAAKAQAGDLRSAVDAAQKKLETLATTTQALDRASASVAVLAVLRDAIVSGRPFATELEAA RAVAGPKAATLDPFASAAGRGYGSTAALAKRLSDEGATALAGEASTGPTGSGVVNRLLSGAESLVRVTPPGGTSAAPSEE TLQKAVATLQAGDADGALAALATLPEGARQKLQPVVSAIQGRRDAANAASALFQQALAAISGKTP
Sequences:
>Translated_465_residues MPFAQRRRMKQGGERAPAAPKPPESERRISFPAVRTQLAARRPMASKNPTSKAAAEASSKADDAPKAPQPETSAPETAAA PVSAPEPVTLEETAAPDTPPKVEAAASAEAASSASAPVSPAEAAARDMVVEPDAYEEADAAEPPIPVVRAPRPSPFVPIL SGALAGAVVAVAAAWVFTHYVPPPAQGVSGGRLDALEIDVARDRAAATQRIEKIEAALRAQSPAQDLQPIASGLAKATSD IAALRAEQQKLAAALQSGVDAAKAQAGDLRSAVDAAQKKLETLATTTQALDRASASVAVLAVLRDAIVSGRPFATELEAA RAVAGPKAATLDPFASAAGRGYGSTAALAKRLSDEGATALAGEASTGPTGSGVVNRLLSGAESLVRVTPPGGTSAAPSEE TLQKAVATLQAGDADGALAALATLPEGARQKLQPVVSAIQGRRDAANAASALFQQALAAISGKTP >Mature_464_residues PFAQRRRMKQGGERAPAAPKPPESERRISFPAVRTQLAARRPMASKNPTSKAAAEASSKADDAPKAPQPETSAPETAAAP VSAPEPVTLEETAAPDTPPKVEAAASAEAASSASAPVSPAEAAARDMVVEPDAYEEADAAEPPIPVVRAPRPSPFVPILS GALAGAVVAVAAAWVFTHYVPPPAQGVSGGRLDALEIDVARDRAAATQRIEKIEAALRAQSPAQDLQPIASGLAKATSDI AALRAEQQKLAAALQSGVDAAKAQAGDLRSAVDAAQKKLETLATTTQALDRASASVAVLAVLRDAIVSGRPFATELEAAR AVAGPKAATLDPFASAAGRGYGSTAALAKRLSDEGATALAGEASTGPTGSGVVNRLLSGAESLVRVTPPGGTSAAPSEET LQKAVATLQAGDADGALAALATLPEGARQKLQPVVSAIQGRRDAANAASALFQQALAAISGKTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46720; Mature: 46588
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFAQRRRMKQGGERAPAAPKPPESERRISFPAVRTQLAARRPMASKNPTSKAAAEASSK CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHC ADDAPKAPQPETSAPETAAAPVSAPEPVTLEETAAPDTPPKVEAAASAEAASSASAPVSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCH AEAAARDMVVEPDAYEEADAAEPPIPVVRAPRPSPFVPILSGALAGAVVAVAAAWVFTHY HHHHHHCCEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC VPPPAQGVSGGRLDALEIDVARDRAAATQRIEKIEAALRAQSPAQDLQPIASGLAKATSD CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IAALRAEQQKLAAALQSGVDAAKAQAGDLRSAVDAAQKKLETLATTTQALDRASASVAVL HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLRDAIVSGRPFATELEAARAVAGPKAATLDPFASAAGRGYGSTAALAKRLSDEGATAL HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEE AGEASTGPTGSGVVNRLLSGAESLVRVTPPGGTSAAPSEETLQKAVATLQAGDADGALAA CCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH LATLPEGARQKLQPVVSAIQGRRDAANAASALFQQALAAISGKTP HHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PFAQRRRMKQGGERAPAAPKPPESERRISFPAVRTQLAARRPMASKNPTSKAAAEASSK CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHC ADDAPKAPQPETSAPETAAAPVSAPEPVTLEETAAPDTPPKVEAAASAEAASSASAPVSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCH AEAAARDMVVEPDAYEEADAAEPPIPVVRAPRPSPFVPILSGALAGAVVAVAAAWVFTHY HHHHHHCCEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC VPPPAQGVSGGRLDALEIDVARDRAAATQRIEKIEAALRAQSPAQDLQPIASGLAKATSD CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IAALRAEQQKLAAALQSGVDAAKAQAGDLRSAVDAAQKKLETLATTTQALDRASASVAVL HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLRDAIVSGRPFATELEAARAVAGPKAATLDPFASAAGRGYGSTAALAKRLSDEGATAL HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEE AGEASTGPTGSGVVNRLLSGAESLVRVTPPGGTSAAPSEETLQKAVATLQAGDADGALAA CCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH LATLPEGARQKLQPVVSAIQGRRDAANAASALFQQALAAISGKTP HHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA