| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is hemY
Identifier: 158421882
GI number: 158421882
Start: 302394
End: 303992
Strand: Reverse
Name: hemY
Synonym: AZC_0258
Alternate gene names: NA
Gene position: 303992-302394 (Counterclockwise)
Preceding gene: 158421883
Following gene: 158421881
Centisome position: 5.66
GC content: 73.73
Gene sequence:
>1599_bases GTGATTCGCCTCGTTCTCTTCCTCATCGTCCTTGCCGCCATCGCCTTCGGCGCCTCCTGGCTCGCGGACCGGCCCGGCGA GATGCTCGTGGTCTGGCAGGGCTGGCGCATCGAGACCACGGTGCCCGTGGCGCTGGCCGCGCTCGCCGCTTTCAGCGTGG CGCTGCTCATCGTCTGGCACCTCGGCGCCCTCCTGCTGCGTTCGCCGCGCATGATCGCGACATTCTCCCGCCGCCGCCGG CGCGAGAAGGGCTGGGCGGCCGTCTCGCGCGGGCTCGTCGCCATCGGCTCGGGGGATCTGGACGCCGCCCGCCGCGCCCG CGCCGAGGCGCTGCGCTATCTGCCGAAGGAGCCCCTGACCCAGTTGCTCGCCGCCCAGTCGGCGCAGGCCACGGGCCATC AGGACGATGCGCTGCGCACCTTCCGCACCATGCTGGATACGCCGGACACCCGCCTGCTCGGCCTGCGGGGCCTGCACATG GAAGCCCGCCGCTCCGGCGACATCGCTGCCGCGCGAATGCTGGCGGAGGAAGCCGCCAACCAGTCTCCGGCGCTCACCTG GGCGGCGGATGCGGTGATCGAGGCCCGCTGCGGCGAGGGCGATTATGCCGGCGCCCGCGAGGTGCTGGAAAAGCAGATGG CCCATCGCGGTATCGACAAGCTCCAGTATCGCCGCCGCCGCGCCGTGCTGTTGGCCGCAGAGGCGCTGGCGCTGGAACAG ACCGACCCGCCGGTGGCCCGTGAGCGCGCGGTGGAGGCGGTGCGCCTCGCCCCGACGTTGGTGCCGGCCGCCGCCGTCGC GGGCCGCCTGCTTGGCGCCAATGGCGAGCTGCGCAAGGCCACCAAGATCGTCGAGACCGCTTATGCGTCAACGCCCCATC CCGAGCTGGCGCAGGTCGCGGCGCACCTGCGCCCCGGCGATGCCGCCCTCGACCGGCTGAAGCGCATCCGCACCTTGGCG GCCAAGGCGCCCGATCATGCGGAAAGCCTGATCGCGCTTGCCCACGCCACCATCGATGCCAACGAGTTCGCCGAGGCTCG CGCCCTGCTCCAGCGCCTTTCCGCCGAGCCCACCCAGCGGGTGTGCCTGCTGATGGCGGAGCTGGAAGCCTCCGAGCATG AGGACGTGGGCAAGGCCCGCGAATGGGCCGCCCGCGCCCTGCGCGCCCCGCGCGATCCGGCCTGGATTGCGGACGGGCGG GTGTTCGATGCCTGGGCGCCGGTCTCCCCCGTCACCGGCAAGCTCGACGCCTTCGTCTGGGCGGTGCCGCCGGGCGTCTC CGCAACGCCGGTTCTGGAGCACGAGGCCGAGCGCGTGCGCCTCGCCATCGCGGCCATCCGCGAGAAGGAGGAGGCCCGCC GGGAACTCGCCCGCGCCGCAGAGCTGGAGAAGCTCGCCGCCAGCGAGGCCGTGGCGGAGGCGGACGCCAAGCGGCGCATG GCGGAGACCGAAGCCGCCGCTGCCGAGCTCAAGACGCCGGAGAAGCCCGACGCCCCGCCGGTGATCGCACTGCCCCCGCT CCCCGACGACCCCGGCCCCACCGGCGAGCCGGACCCGGTGGCCGCTGCCCCGGTGCGCAAGCGCATGTTCGGGCTCTGA
Upstream 100 bases:
>100_bases TCCAGCCGGTGGTGAGCGCCATTCAAGGCCGGCGGGATGCCGCCAATGCCGCCTCCGCCCTGTTCCAGCAGGCGCTCGCC GCCATTTCCGGGAAGACGCC
Downstream 100 bases:
>100_bases CGGTTCCGGCGCGGCGGGCTCCGCCGCGCCACGCCCTGCGCCGGAATGGCACAGGTTTGACCGGCCGCGGGGCTGCAGCG CCGGTTGCAGCCTTGTGGCG
Product: HemY protein
Products: NA
Alternate protein names: HemY Domain Protein; HemY-Like; HemY Protein; HemY N-Terminal Domain Protein; Hypthetical Protein Contains N-Terminal HemY Domain; Signal Peptide
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MIRLVLFLIVLAAIAFGASWLADRPGEMLVVWQGWRIETTVPVALAALAAFSVALLIVWHLGALLLRSPRMIATFSRRRR REKGWAAVSRGLVAIGSGDLDAARRARAEALRYLPKEPLTQLLAAQSAQATGHQDDALRTFRTMLDTPDTRLLGLRGLHM EARRSGDIAAARMLAEEAANQSPALTWAADAVIEARCGEGDYAGAREVLEKQMAHRGIDKLQYRRRRAVLLAAEALALEQ TDPPVARERAVEAVRLAPTLVPAAAVAGRLLGANGELRKATKIVETAYASTPHPELAQVAAHLRPGDAALDRLKRIRTLA AKAPDHAESLIALAHATIDANEFAEARALLQRLSAEPTQRVCLLMAELEASEHEDVGKAREWAARALRAPRDPAWIADGR VFDAWAPVSPVTGKLDAFVWAVPPGVSATPVLEHEAERVRLAIAAIREKEEARRELARAAELEKLAASEAVAEADAKRRM AETEAAAAELKTPEKPDAPPVIALPPLPDDPGPTGEPDPVAAAPVRKRMFGL
Sequences:
>Translated_532_residues MIRLVLFLIVLAAIAFGASWLADRPGEMLVVWQGWRIETTVPVALAALAAFSVALLIVWHLGALLLRSPRMIATFSRRRR REKGWAAVSRGLVAIGSGDLDAARRARAEALRYLPKEPLTQLLAAQSAQATGHQDDALRTFRTMLDTPDTRLLGLRGLHM EARRSGDIAAARMLAEEAANQSPALTWAADAVIEARCGEGDYAGAREVLEKQMAHRGIDKLQYRRRRAVLLAAEALALEQ TDPPVARERAVEAVRLAPTLVPAAAVAGRLLGANGELRKATKIVETAYASTPHPELAQVAAHLRPGDAALDRLKRIRTLA AKAPDHAESLIALAHATIDANEFAEARALLQRLSAEPTQRVCLLMAELEASEHEDVGKAREWAARALRAPRDPAWIADGR VFDAWAPVSPVTGKLDAFVWAVPPGVSATPVLEHEAERVRLAIAAIREKEEARRELARAAELEKLAASEAVAEADAKRRM AETEAAAAELKTPEKPDAPPVIALPPLPDDPGPTGEPDPVAAAPVRKRMFGL >Mature_532_residues MIRLVLFLIVLAAIAFGASWLADRPGEMLVVWQGWRIETTVPVALAALAAFSVALLIVWHLGALLLRSPRMIATFSRRRR REKGWAAVSRGLVAIGSGDLDAARRARAEALRYLPKEPLTQLLAAQSAQATGHQDDALRTFRTMLDTPDTRLLGLRGLHM EARRSGDIAAARMLAEEAANQSPALTWAADAVIEARCGEGDYAGAREVLEKQMAHRGIDKLQYRRRRAVLLAAEALALEQ TDPPVARERAVEAVRLAPTLVPAAAVAGRLLGANGELRKATKIVETAYASTPHPELAQVAAHLRPGDAALDRLKRIRTLA AKAPDHAESLIALAHATIDANEFAEARALLQRLSAEPTQRVCLLMAELEASEHEDVGKAREWAARALRAPRDPAWIADGR VFDAWAPVSPVTGKLDAFVWAVPPGVSATPVLEHEAERVRLAIAAIREKEEARRELARAAELEKLAASEAVAEADAKRRM AETEAAAAELKTPEKPDAPPVIALPPLPDDPGPTGEPDPVAAAPVRKRMFGL
Specific function: Unknown
COG id: COG3898
COG function: function code S; Uncharacterized membrane-bound protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57438; Mature: 57438
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLVLFLIVLAAIAFGASWLADRPGEMLVVWQGWRIETTVPVALAALAAFSVALLIVWH CHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHH LGALLLRSPRMIATFSRRRRREKGWAAVSRGLVAIGSGDLDAARRARAEALRYLPKEPLT HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCHHHHH QLLAAQSAQATGHQDDALRTFRTMLDTPDTRLLGLRGLHMEARRSGDIAAARMLAEEAAN HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHCC QSPALTWAADAVIEARCGEGDYAGAREVLEKQMAHRGIDKLQYRRRRAVLLAAEALALEQ CCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC TDPPVARERAVEAVRLAPTLVPAAAVAGRLLGANGELRKATKIVETAYASTPHPELAQVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH AHLRPGDAALDRLKRIRTLAAKAPDHAESLIALAHATIDANEFAEARALLQRLSAEPTQR HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH VCLLMAELEASEHEDVGKAREWAARALRAPRDPAWIADGRVFDAWAPVSPVTGKLDAFVW HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCCCCCCCCCCCEEEE AVPPGVSATPVLEHEAERVRLAIAAIREKEEARRELARAAELEKLAASEAVAEADAKRRM ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AETEAAAAELKTPEKPDAPPVIALPPLPDDPGPTGEPDPVAAAPVRKRMFGL HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MIRLVLFLIVLAAIAFGASWLADRPGEMLVVWQGWRIETTVPVALAALAAFSVALLIVWH CHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHH LGALLLRSPRMIATFSRRRRREKGWAAVSRGLVAIGSGDLDAARRARAEALRYLPKEPLT HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCHHHHH QLLAAQSAQATGHQDDALRTFRTMLDTPDTRLLGLRGLHMEARRSGDIAAARMLAEEAAN HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHCC QSPALTWAADAVIEARCGEGDYAGAREVLEKQMAHRGIDKLQYRRRRAVLLAAEALALEQ CCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC TDPPVARERAVEAVRLAPTLVPAAAVAGRLLGANGELRKATKIVETAYASTPHPELAQVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH AHLRPGDAALDRLKRIRTLAAKAPDHAESLIALAHATIDANEFAEARALLQRLSAEPTQR HHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH VCLLMAELEASEHEDVGKAREWAARALRAPRDPAWIADGRVFDAWAPVSPVTGKLDAFVW HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCEEEECCCCCCCCCCCCCEEEE AVPPGVSATPVLEHEAERVRLAIAAIREKEEARRELARAAELEKLAASEAVAEADAKRRM ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AETEAAAAELKTPEKPDAPPVIALPPLPDDPGPTGEPDPVAAAPVRKRMFGL HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA