| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yecE [C]
Identifier: 158421874
GI number: 158421874
Start: 291749
End: 292696
Strand: Direct
Name: yecE [C]
Synonym: AZC_0250
Alternate gene names: 158421874
Gene position: 291749-292696 (Clockwise)
Preceding gene: 158421873
Following gene: 158421875
Centisome position: 5.43
GC content: 68.88
Gene sequence:
>948_bases ATGGCGGCCCGCCATCCGCCAGCCGATGTGCGCATCGGCGTCTCGGGATGGACCTATGCGCCGTGGCGGGGCGCCTTCTA TCCCGAGGGCCTCGGCGCGAAGCGGGAACTGGCCTATGCGGCGCAAGTCTTCCGCTCGCTGGAGGTGAACGGCACCTTCT ATGGCCTCCAGAAACCGGAGGTCTTTGCCCGCTGGGCGGCTGAAACGCCCGACGATTTCCTCTTCGCGGTGAAAGGGCCG CGCTTCATCACCCATATGAAGCGGCTGAAGGCGGTGGAGGCGCCCCTCGCGAATTTCTTCGCCTCCGGCGTCCTGAAGCT CGGCCGCAAGCTCGGGCCGGTGCTGTGGCAATTGCCGGCGTCCTTTCCCTTCAACGAGGCACGGCTCGACGCCTTCCTGT CCCTCCTGCCCCGCAACATGGCGACGGCATCGGAGTTGGCCCGGCGGCACGATGCGCGCCTTGAAGGGCGGGCGGCGGTG GGGGCCGAGACGGACGGTCCGCTGCGCCATGCGCTGGAAATCCGCCACGACAGTTATCGCACGCCCGCCTTCACGGACCT GCTGCGGCATCACGGCGTCGCCCTCGTCTGCGCCGATACGGTCGAGTGGCCACTGCTCATGGATGCGACCGCCGACTTCA TCTATGTGCGCCTGCACGGCTCGCAGGAGCTCTATCGCAGCGCCTATCCGCCCGAAGAACTGGACCGCTGGGCGGCGCGC GTGCGCCACTGGCGGGAGGGCCAGGCGATGACCGACGGCGCCTTCATCGACGCCCGCAGTGTGCCGAAGCGCCCGCGCGA CGTGTTCGTCTATTTCGACAATACGGACAAGCTGCACGCCCCCGATGATGCCCGCGCCCTCATGACACGCCTCGGCCAGA CGCCGGGCCATCCGGACGTGCCGGTGCGGCGCCGCCGGAAGATCGGGGCAGCGGAGGCGCACCCGTGA
Upstream 100 bases:
>100_bases AGGAACCGGCCGACATCCAGAACAATCTGGGCGAATTCCCGACCCTGACCGACCAGGGCGAGCAGGTGCCTCCGAGCCGC AAGGCGGTGCCGGAGGACTA
Downstream 100 bases:
>100_bases CCGGCCCTGAGGCGCTGGCGGCGCTCGCCCGAGATGCGGCGAATTGCATACGCTGTCCGCTCTATCGCGATGCCACGCAG ACGGTGTTCGGCGAGGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MAARHPPADVRIGVSGWTYAPWRGAFYPEGLGAKRELAYAAQVFRSLEVNGTFYGLQKPEVFARWAAETPDDFLFAVKGP RFITHMKRLKAVEAPLANFFASGVLKLGRKLGPVLWQLPASFPFNEARLDAFLSLLPRNMATASELARRHDARLEGRAAV GAETDGPLRHALEIRHDSYRTPAFTDLLRHHGVALVCADTVEWPLLMDATADFIYVRLHGSQELYRSAYPPEELDRWAAR VRHWREGQAMTDGAFIDARSVPKRPRDVFVYFDNTDKLHAPDDARALMTRLGQTPGHPDVPVRRRRKIGAAEAHP
Sequences:
>Translated_315_residues MAARHPPADVRIGVSGWTYAPWRGAFYPEGLGAKRELAYAAQVFRSLEVNGTFYGLQKPEVFARWAAETPDDFLFAVKGP RFITHMKRLKAVEAPLANFFASGVLKLGRKLGPVLWQLPASFPFNEARLDAFLSLLPRNMATASELARRHDARLEGRAAV GAETDGPLRHALEIRHDSYRTPAFTDLLRHHGVALVCADTVEWPLLMDATADFIYVRLHGSQELYRSAYPPEELDRWAAR VRHWREGQAMTDGAFIDARSVPKRPRDVFVYFDNTDKLHAPDDARALMTRLGQTPGHPDVPVRRRRKIGAAEAHP >Mature_314_residues AARHPPADVRIGVSGWTYAPWRGAFYPEGLGAKRELAYAAQVFRSLEVNGTFYGLQKPEVFARWAAETPDDFLFAVKGPR FITHMKRLKAVEAPLANFFASGVLKLGRKLGPVLWQLPASFPFNEARLDAFLSLLPRNMATASELARRHDARLEGRAAVG AETDGPLRHALEIRHDSYRTPAFTDLLRHHGVALVCADTVEWPLLMDATADFIYVRLHGSQELYRSAYPPEELDRWAARV RHWREGQAMTDGAFIDARSVPKRPRDVFVYFDNTDKLHAPDDARALMTRLGQTPGHPDVPVRRRRKIGAAEAHP
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35440; Mature: 35309
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARHPPADVRIGVSGWTYAPWRGAFYPEGLGAKRELAYAAQVFRSLEVNGTFYGLQKPE CCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCH VFARWAAETPDDFLFAVKGPRFITHMKRLKAVEAPLANFFASGVLKLGRKLGPVLWQLPA HHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC SFPFNEARLDAFLSLLPRNMATASELARRHDARLEGRAAVGAETDGPLRHALEIRHDSYR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCC TPAFTDLLRHHGVALVCADTVEWPLLMDATADFIYVRLHGSQELYRSAYPPEELDRWAAR CCHHHHHHHHCCEEEEEECCCCCCEEEECCCCEEEEEEECCHHHHHCCCCHHHHHHHHHH VRHWREGQAMTDGAFIDARSVPKRPRDVFVYFDNTDKLHAPDDARALMTRLGQTPGHPDV HHHHHCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCC PVRRRRKIGAAEAHP CHHHHHHCCCCCCCC >Mature Secondary Structure AARHPPADVRIGVSGWTYAPWRGAFYPEGLGAKRELAYAAQVFRSLEVNGTFYGLQKPE CCCCCCCCEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCH VFARWAAETPDDFLFAVKGPRFITHMKRLKAVEAPLANFFASGVLKLGRKLGPVLWQLPA HHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC SFPFNEARLDAFLSLLPRNMATASELARRHDARLEGRAAVGAETDGPLRHALEIRHDSYR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCC TPAFTDLLRHHGVALVCADTVEWPLLMDATADFIYVRLHGSQELYRSAYPPEELDRWAAR CCHHHHHHHHCCEEEEEECCCCCCEEEECCCCEEEEEEECCHHHHHCCCCHHHHHHHHHH VRHWREGQAMTDGAFIDARSVPKRPRDVFVYFDNTDKLHAPDDARALMTRLGQTPGHPDV HHHHHCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCC PVRRRRKIGAAEAHP CHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA