| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is exoN [H]
Identifier: 158421786
GI number: 158421786
Start: 191159
End: 192157
Strand: Reverse
Name: exoN [H]
Synonym: AZC_0162
Alternate gene names: 158421786
Gene position: 192157-191159 (Counterclockwise)
Preceding gene: 158421789
Following gene: 158421785
Centisome position: 3.58
GC content: 63.56
Gene sequence:
>999_bases ATGCTCAAGTTTTGCAACCAATTCCGGGCCATAGCGTTGCTTTGCGAACACCCAGTTTCCTGTGTTAGGAAGCCGGGCTT TTCCATTTTGGGAAATAAGGAACGGGGCGTCATGCCAAAGCCACTTCGCAAAGCCATCCTGCCGGTCGCGGGTCTGGGAA CGCGCTTCCTTCCGGCCACCAAGGCGGTGCCGAAGGAGATGCTGACGGTGGTGGACCGTCCCGTGGTGCAGCACGTCGTG GACGAGGCGGTCGCCGCCGGCATCGAGCACATCGTCTTCGTCACCGGCCGCAACAAGGCGGTGATCGAGGACCATTTCGA TCGCCAGTTCGAGCTCGAGAAGACCCTTGCCGACCGCGGCAAGACCAAGGAACTCGCGCAGCTCGACCGCGACACACCGA AGGCCGGCACCACCTCCTTCACCCGCCAGCAGCTGCCTCTCGGCCTTGGCCATGCGGTCTGGTGCGCCCGGGACCTGATC GGCGACGAACCCTTCGCGCTTCTCCTGCCCGACATGCTCCATCTGCCCAACGGCAACGGCAAGGGCTGCCTCACCGAGAT GGTGGAGACCTACAACAAGACCGGCGGCAACGTGATCTCGGTCTATGAGGTTCCCGACGACCAGACGAACCAGTACGGCA TCGTCGGCCTCGGCAAGGAAACCAGCGCCAAGGCGCACGAGATCACCCAGATGGTCGAGAAGCCGGCGGCCGGCACGGCG CCGAGCAACCTCGCCATCTCCGGCCGCTACATCCTCCAGCCCACCATCTTCGACCTGCTCGCCAAGCAGGAGCAGGGCGC GGGCAACGAGATCCAGCTCACCGACTCGATGCTGAAGCTGATGGAGCGCGAGCGCTTCTTCTCCGTCCGCTTCGACGGCT CGGTCTATGACTGCGGCTCGAAGATCGGCTTCCTCATGGCGAACGTCGCCTATGCCCTGTCGCGGCCCGACATCGCGCCG GAATTCCGGACGGAACTCGGTCACTTCCTCGGCAATTGA
Upstream 100 bases:
>100_bases ACCAGAACCGCCATGCCGTCCTCCTTGCATGTTCAAGGTGAAGGTGATGCAGCGCTCCTTCTGCGTCAATTAAAAGGAGT AGTCGCTGTTCGGCCGCAAA
Downstream 100 bases:
>100_bases CACAGCGTCAGCGTCAAGGTGCCTGTGCCAAGCATGGCTCGGGCGCCTTGACCCGGTGTGCTTTCCCGTCTAATCGCCAG AGAATTCTGCGCTCGTTCCT
Product: UTP--glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MLKFCNQFRAIALLCEHPVSCVRKPGFSILGNKERGVMPKPLRKAILPVAGLGTRFLPATKAVPKEMLTVVDRPVVQHVV DEAVAAGIEHIVFVTGRNKAVIEDHFDRQFELEKTLADRGKTKELAQLDRDTPKAGTTSFTRQQLPLGLGHAVWCARDLI GDEPFALLLPDMLHLPNGNGKGCLTEMVETYNKTGGNVISVYEVPDDQTNQYGIVGLGKETSAKAHEITQMVEKPAAGTA PSNLAISGRYILQPTIFDLLAKQEQGAGNEIQLTDSMLKLMERERFFSVRFDGSVYDCGSKIGFLMANVAYALSRPDIAP EFRTELGHFLGN
Sequences:
>Translated_332_residues MLKFCNQFRAIALLCEHPVSCVRKPGFSILGNKERGVMPKPLRKAILPVAGLGTRFLPATKAVPKEMLTVVDRPVVQHVV DEAVAAGIEHIVFVTGRNKAVIEDHFDRQFELEKTLADRGKTKELAQLDRDTPKAGTTSFTRQQLPLGLGHAVWCARDLI GDEPFALLLPDMLHLPNGNGKGCLTEMVETYNKTGGNVISVYEVPDDQTNQYGIVGLGKETSAKAHEITQMVEKPAAGTA PSNLAISGRYILQPTIFDLLAKQEQGAGNEIQLTDSMLKLMERERFFSVRFDGSVYDCGSKIGFLMANVAYALSRPDIAP EFRTELGHFLGN >Mature_332_residues MLKFCNQFRAIALLCEHPVSCVRKPGFSILGNKERGVMPKPLRKAILPVAGLGTRFLPATKAVPKEMLTVVDRPVVQHVV DEAVAAGIEHIVFVTGRNKAVIEDHFDRQFELEKTLADRGKTKELAQLDRDTPKAGTTSFTRQQLPLGLGHAVWCARDLI GDEPFALLLPDMLHLPNGNGKGCLTEMVETYNKTGGNVISVYEVPDDQTNQYGIVGLGKETSAKAHEITQMVEKPAAGTA PSNLAISGRYILQPTIFDLLAKQEQGAGNEIQLTDSMLKLMERERFFSVRFDGSVYDCGSKIGFLMANVAYALSRPDIAP EFRTELGHFLGN
Specific function: May Play A Role In Stationary Phase Survival. [C]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Homo sapiens, GI11761619, Length=282, Percent_Identity=24.468085106383, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI11761621, Length=282, Percent_Identity=24.468085106383, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1787488, Length=294, Percent_Identity=44.5578231292517, Blast_Score=235, Evalue=3e-63, Organism=Escherichia coli, GI1788355, Length=294, Percent_Identity=37.7551020408163, Blast_Score=202, Evalue=2e-53, Organism=Escherichia coli, GI1788351, Length=271, Percent_Identity=26.5682656826568, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 36449; Mature: 36449
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKFCNQFRAIALLCEHPVSCVRKPGFSILGNKERGVMPKPLRKAILPVAGLGTRFLPAT CCHHHHHHHHHHHHHHCCHHHHHCCCCCEECCCCCCCCCHHHHHHHCCHHCCCCCCCCHH KAVPKEMLTVVDRPVVQHVVDEAVAAGIEHIVFVTGRNKAVIEDHFDRQFELEKTLADRG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHCCCHHHHHHHHHCCC KTKELAQLDRDTPKAGTTSFTRQQLPLGLGHAVWCARDLIGDEPFALLLPDMLHLPNGNG CHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHCHHHHHCCCCCC KGCLTEMVETYNKTGGNVISVYEVPDDQTNQYGIVGLGKETSAKAHEITQMVEKPAAGTA CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCC PSNLAISGRYILQPTIFDLLAKQEQGAGNEIQLTDSMLKLMERERFFSVRFDGSVYDCGS CCCEEECCEEEECHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHEEEEECCCHHHCHH KIGFLMANVAYALSRPDIAPEFRTELGHFLGN HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLKFCNQFRAIALLCEHPVSCVRKPGFSILGNKERGVMPKPLRKAILPVAGLGTRFLPAT CCHHHHHHHHHHHHHHCCHHHHHCCCCCEECCCCCCCCCHHHHHHHCCHHCCCCCCCCHH KAVPKEMLTVVDRPVVQHVVDEAVAAGIEHIVFVTGRNKAVIEDHFDRQFELEKTLADRG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHCCCHHHHHHHHHCCC KTKELAQLDRDTPKAGTTSFTRQQLPLGLGHAVWCARDLIGDEPFALLLPDMLHLPNGNG CHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHCHHHHHCCCCCC KGCLTEMVETYNKTGGNVISVYEVPDDQTNQYGIVGLGKETSAKAHEITQMVEKPAAGTA CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCC PSNLAISGRYILQPTIFDLLAKQEQGAGNEIQLTDSMLKLMERERFFSVRFDGSVYDCGS CCCEEECCEEEECHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHEEEEECCCHHHCHH KIGFLMANVAYALSRPDIAPEFRTELGHFLGN HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226645; 8226646; 8246891; 11481431 [H]