Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

Click here to switch to the map view.

The map label for this gene is 158421770

Identifier: 158421770

GI number: 158421770

Start: 174993

End: 176153

Strand: Reverse

Name: 158421770

Synonym: AZC_0146

Alternate gene names: NA

Gene position: 176153-174993 (Counterclockwise)

Preceding gene: 158421772

Following gene: 158421769

Centisome position: 3.28

GC content: 71.32

Gene sequence:

>1161_bases
ATGCTCGAAACCCTGAAGCGGCTCATTCCGCCCATCGGGCCGGTGAGCCCGTCCGAGCAGGTCCGCGCCGCCTGCGGGGC
GCTGCTCGGCATCTTCCTGACCGGCTTCATCACCCGTCTCGCGCTCGGCTCGGGCTCCGCCGTGCCGCTGCTCATCGCCC
CCATGGGCGCGTCCGCCGTGCTGCTGTTCGCCGTGCCGTCGAGCCCGCTCGCGCAGCCCTGGTCGATCCTCGGCGGGAAT
CTGGTGGCCTCCACCGTCGGCGTCACCGCCACCATGTGGATCCCCGATCCCTTCCTCGCCGGAGGCGTCGGCGTGGGCGG
GGCCATTGCGCTCATGCTGGCGCTGCGCTGCGTGCATCCGCCCAGCGGGGCGGTGGCGCTCACCGCCGTGGTGGGCGGCC
CGGCGGTGACCAAGCTCGGCTATGCGTTCGTCCTGTGGCCGGTGATGGTGAATTCGCTGGTCATCCTCTCGGTCGCCATC
GCCTACAACAACCTCACGCGCCGGCGCTATCCGCACCTCGCCCCGCTCAAGACGCCGGCCCCGGCGGCGCAGGAAGCCCG
CGCGGCCACCTTCGCCCATCAGGACATCATCGCCGCCCTGCGGGAGGCGGACGAACTGATCGACGTGGACCCGTCCGACC
TCGAGGACATCCTGCACCGCGCCCAGCTCCGCGCGTTCGATCGGCGCTCGGACGGGCTCACCTGCGGAGACATCATGACG
CGGCACGTACTCGCGGTCTCTCCCGCCACCCCCATTCTGGAGGCCATGGAACTGTTGCGGTCCGGCCGGACCAAGGTGCT
GCCGGTGACCAGCGACAAGGCGGAGGTGATCGGCGTCCTCACCCAGACCGACTTGCTGGACAAGGTGGACTGGGACCATA
AAGGCCCGCGCCTCGGCTTCGGCAGGCGCGTCAGCGCGGCACTCCGCGCCGGGCGGGCGCCGGATGGAACGGTGGAGGAG
ATCATGAGCACGCCGGTCACCGCCGTCACCGCCGAGATGCGCGTCGCCGCCCTCGTGCCGCTCATGTCGCAGAGCGGGAT
GCACCACATTCCGGTGGTGGACGCCAAGGGCCAGCTCGCCGGCGTGGTCAGCCAGGGCGATCTCATCGCCGCGCTGATCC
AGGGCCGCGGCGAGGCTCCCCCCGCCCAAGTGGCCTCCTGA

Upstream 100 bases:

>100_bases
GCCGCACCCAGGCATTGGCATTACGTATGCCAATATTGCCCACGGATCAGGCTTCCTGCTAATTCATTGGGCAACAAACA
AGCCGAACGGGAGGCGCCCC

Downstream 100 bases:

>100_bases
TGCACGATCACGTCACGCCGCAGACCATCGCAGACCTGCTGGACCGCTTCTATGCGAAGGCGCGAGCGCACGAGCGGCTC
GGCCCGGTCTTCAACGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: CBS Domain-Containing Protein; CBS Domain Containing Membrane Protein; HPP Family Protein+B; CBS Domain-Containing Membrane Protein; Cbs Domain Containing Membrane Protein; CbsHpp; HPP Domain-Containing Protein; Signal Transduction Protein; HPP Family Membrane Protein; HPP Family/CBS Domain-Containing Protein; HPP Domain And CBS Domain Pair-Containing Protein; Transmembrane Protein; Tryptophan Synthase Alpha Chain; CBS Domain Pair Family; CBS-Domain-Containing Membrane Protein; Conserved Protein; HPP Family; HPP Domain Protein

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MLETLKRLIPPIGPVSPSEQVRAACGALLGIFLTGFITRLALGSGSAVPLLIAPMGASAVLLFAVPSSPLAQPWSILGGN
LVASTVGVTATMWIPDPFLAGGVGVGGAIALMLALRCVHPPSGAVALTAVVGGPAVTKLGYAFVLWPVMVNSLVILSVAI
AYNNLTRRRYPHLAPLKTPAPAAQEARAATFAHQDIIAALREADELIDVDPSDLEDILHRAQLRAFDRRSDGLTCGDIMT
RHVLAVSPATPILEAMELLRSGRTKVLPVTSDKAEVIGVLTQTDLLDKVDWDHKGPRLGFGRRVSAALRAGRAPDGTVEE
IMSTPVTAVTAEMRVAALVPLMSQSGMHHIPVVDAKGQLAGVVSQGDLIAALIQGRGEAPPAQVAS

Sequences:

>Translated_386_residues
MLETLKRLIPPIGPVSPSEQVRAACGALLGIFLTGFITRLALGSGSAVPLLIAPMGASAVLLFAVPSSPLAQPWSILGGN
LVASTVGVTATMWIPDPFLAGGVGVGGAIALMLALRCVHPPSGAVALTAVVGGPAVTKLGYAFVLWPVMVNSLVILSVAI
AYNNLTRRRYPHLAPLKTPAPAAQEARAATFAHQDIIAALREADELIDVDPSDLEDILHRAQLRAFDRRSDGLTCGDIMT
RHVLAVSPATPILEAMELLRSGRTKVLPVTSDKAEVIGVLTQTDLLDKVDWDHKGPRLGFGRRVSAALRAGRAPDGTVEE
IMSTPVTAVTAEMRVAALVPLMSQSGMHHIPVVDAKGQLAGVVSQGDLIAALIQGRGEAPPAQVAS
>Mature_386_residues
MLETLKRLIPPIGPVSPSEQVRAACGALLGIFLTGFITRLALGSGSAVPLLIAPMGASAVLLFAVPSSPLAQPWSILGGN
LVASTVGVTATMWIPDPFLAGGVGVGGAIALMLALRCVHPPSGAVALTAVVGGPAVTKLGYAFVLWPVMVNSLVILSVAI
AYNNLTRRRYPHLAPLKTPAPAAQEARAATFAHQDIIAALREADELIDVDPSDLEDILHRAQLRAFDRRSDGLTCGDIMT
RHVLAVSPATPILEAMELLRSGRTKVLPVTSDKAEVIGVLTQTDLLDKVDWDHKGPRLGFGRRVSAALRAGRAPDGTVEE
IMSTPVTAVTAEMRVAALVPLMSQSGMHHIPVVDAKGQLAGVVSQGDLIAALIQGRGEAPPAQVAS

Specific function: Unknown

COG id: COG3448

COG function: function code T; CBS-domain-containing membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40178; Mature: 40178

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLETLKRLIPPIGPVSPSEQVRAACGALLGIFLTGFITRLALGSGSAVPLLIAPMGASAV
CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEE
LLFAVPSSPLAQPWSILGGNLVASTVGVTATMWIPDPFLAGGVGVGGAIALMLALRCVHP
EEEEECCCCCCCCHHHHCCHHHHHHHCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHCCC
PSGAVALTAVVGGPAVTKLGYAFVLWPVMVNSLVILSVAIAYNNLTRRRYPHLAPLKTPA
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PAAQEARAATFAHQDIIAALREADELIDVDPSDLEDILHRAQLRAFDRRSDGLTCGDIMT
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RHVLAVSPATPILEAMELLRSGRTKVLPVTSDKAEVIGVLTQTDLLDKVDWDHKGPRLGF
HHHHEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHEEHHHHHHHHHHCCCCCCCCCCCC
GRRVSAALRAGRAPDGTVEEIMSTPVTAVTAEMRVAALVPLMSQSGMHHIPVVDAKGQLA
CHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEE
GVVSQGDLIAALIQGRGEAPPAQVAS
EEECCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLETLKRLIPPIGPVSPSEQVRAACGALLGIFLTGFITRLALGSGSAVPLLIAPMGASAV
CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEE
LLFAVPSSPLAQPWSILGGNLVASTVGVTATMWIPDPFLAGGVGVGGAIALMLALRCVHP
EEEEECCCCCCCCHHHHCCHHHHHHHCCEEEEECCCHHHCCCCCHHHHHHHHHHHHHCCC
PSGAVALTAVVGGPAVTKLGYAFVLWPVMVNSLVILSVAIAYNNLTRRRYPHLAPLKTPA
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PAAQEARAATFAHQDIIAALREADELIDVDPSDLEDILHRAQLRAFDRRSDGLTCGDIMT
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RHVLAVSPATPILEAMELLRSGRTKVLPVTSDKAEVIGVLTQTDLLDKVDWDHKGPRLGF
HHHHEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHEEHHHHHHHHHHCCCCCCCCCCCC
GRRVSAALRAGRAPDGTVEEIMSTPVTAVTAEMRVAALVPLMSQSGMHHIPVVDAKGQLA
CHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEE
GVVSQGDLIAALIQGRGEAPPAQVAS
EEECCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA