| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158421765
Identifier: 158421765
GI number: 158421765
Start: 170340
End: 170858
Strand: Reverse
Name: 158421765
Synonym: AZC_0141
Alternate gene names: NA
Gene position: 170858-170340 (Counterclockwise)
Preceding gene: 158421769
Following gene: 158421764
Centisome position: 3.18
GC content: 69.94
Gene sequence:
>519_bases GTGGCTCGTCCACCGCCAACCTCCCGGCCCCTATATCGTCGCCCACGCGCCGAATGGCAAGCCCGCCTTGCGCCGGCTTT CGATTCTTCCTCAAGTGCGGCCATGACCGATTCGTTCACGCTCGATCCTCGCCTTGCCGCCGATGGCCCCGCGCTCGGCG ACCTGCCGCTCTGCCACCTGCGCCTCGTGGAGGACGCGCGCTTTCCATGGGTGGTGATGATCCCTCGCCGGGCCGCGCGG GTGGAGATCATCGACCTCGCCCCGCAGGACCGGGCGACGCTCATGGAAGAGATCGCCACCGTCAGCTCCGCGCTCAAGTC GGTGAGCGGCGCGCAGAAGCTGAACGTGGCCGCGCTCGGCAACATGGTGCCGCAGCTCCACGTGCATATCGTCGGCCGCA CGGCGGGCGATGCGGCCTGGCCCGGCCCGGTGTTCGGGGCCGGCACGCGAATGCCCTATGGAGAGGATGCCCGGAGCGCG TTCGTGAGCCGGCTCAAGGCCAGTCTCCGCCTGCCCTGA
Upstream 100 bases:
>100_bases AACATGACATGCCCATGCGTGGAGAAGGTGGGAGGCTGGACAGAGACCCGAGACCGGGCTCGTTGGGGCTGCTTCCTTCC GGACCTGACCCGGTTGGCGA
Downstream 100 bases:
>100_bases GGCGCTTGCCTCCATCGGGCCGGCGTGCCACGGTCCGGCGCAGGCCTCCCGCCCTCAGTTCTCAGGCTCCATGCTCGCGT CCTCGTCTTCCCCTCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Histidine Triad Domain Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad; HIT Hydrolase; Pectate Lyase/Amb Allergen; Diadenosine Tetraphosphate; HIT Domain-Containing Protein; HIT1 Protein; HIT Family Protein; Diadenosine Tetraphosphate Hydrolase-Like Protein
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MARPPPTSRPLYRRPRAEWQARLAPAFDSSSSAAMTDSFTLDPRLAADGPALGDLPLCHLRLVEDARFPWVVMIPRRAAR VEIIDLAPQDRATLMEEIATVSSALKSVSGAQKLNVAALGNMVPQLHVHIVGRTAGDAAWPGPVFGAGTRMPYGEDARSA FVSRLKASLRLP
Sequences:
>Translated_172_residues MARPPPTSRPLYRRPRAEWQARLAPAFDSSSSAAMTDSFTLDPRLAADGPALGDLPLCHLRLVEDARFPWVVMIPRRAAR VEIIDLAPQDRATLMEEIATVSSALKSVSGAQKLNVAALGNMVPQLHVHIVGRTAGDAAWPGPVFGAGTRMPYGEDARSA FVSRLKASLRLP >Mature_171_residues ARPPPTSRPLYRRPRAEWQARLAPAFDSSSSAAMTDSFTLDPRLAADGPALGDLPLCHLRLVEDARFPWVVMIPRRAARV EIIDLAPQDRATLMEEIATVSSALKSVSGAQKLNVAALGNMVPQLHVHIVGRTAGDAAWPGPVFGAGTRMPYGEDARSAF VSRLKASLRLP
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18576; Mature: 18444
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPPPTSRPLYRRPRAEWQARLAPAFDSSSSAAMTDSFTLDPRLAADGPALGDLPLCHL CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEECCCEECCCCCCCCCCCCCCCCHHHH RLVEDARFPWVVMIPRRAARVEIIDLAPQDRATLMEEIATVSSALKSVSGAQKLNVAALG EEECCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH NMVPQLHVHIVGRTAGDAAWPGPVFGAGTRMPYGEDARSAFVSRLKASLRLP CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARPPPTSRPLYRRPRAEWQARLAPAFDSSSSAAMTDSFTLDPRLAADGPALGDLPLCHL CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEECCCEECCCCCCCCCCCCCCCCHHHH RLVEDARFPWVVMIPRRAARVEIIDLAPQDRATLMEEIATVSSALKSVSGAQKLNVAALG EEECCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH NMVPQLHVHIVGRTAGDAAWPGPVFGAGTRMPYGEDARSAFVSRLKASLRLP CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA