| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158421754
Identifier: 158421754
GI number: 158421754
Start: 158017
End: 158466
Strand: Reverse
Name: 158421754
Synonym: AZC_0130
Alternate gene names: NA
Gene position: 158466-158017 (Counterclockwise)
Preceding gene: 158421755
Following gene: 158421753
Centisome position: 2.95
GC content: 61.11
Gene sequence:
>450_bases ATGAGCGTTCCGAGGGTCTATCTGGATACCAATGTTTTCATTGCGGCGTTCGAGATGACCGGTGCCCATTCGGACCACGC ATGGTGGATATTGAAAGGTATCGAGGCCGGTACGATCATTGGCGTCACCAGTGAGATCACACTGGCAGAAGTCCTCGTGA AGCCCATGGAGCGGGATGATGAGGCTCTTGCGGACGCCTACGAGGGTATGATCGCGCCAGCTCCGTATTTCGAGACCGTC AGTGTCGGCCGTGATGTCCTGACCACGGCTGCGCGCCTGCGGGCGGGGCGGCACTCGCTGCGCCTGCCGGACGCCATCCA CGTCGCCTCGGCGCAGATCGCGCAATGCAGCGTCTTCATCACGCAGGACGAGCGCATCGCGCTTCCGGACGATCTACGTC GGCTCGGCGTCACTCCATTCACGCTCGACGATATTCTGGGGCAACCATGA
Upstream 100 bases:
>100_bases GTCATTTCAGCCGCTGGCGGCACCTGCGTCAGACACGGTTCGAAACGCCGGAGGGCGTTGTCGCCCACGTCCGCGCCCTG CGGGACGAATGGGATCGCCG
Downstream 100 bases:
>100_bases CAGAGACCTCCGCCCCCCTCCTCTCCGTGCAGGACCTCTCCGTCGCCTTCCGCCGCGAGGGACGGGAGCAGATCGCGGTC AATCGCGTGTCGTTCGATGT
Product: twitching mobility protein PilT
Products: NA
Alternate protein names: PilT Protein-Like Protein; PilT Protein-Like; PilT Protein
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSVPRVYLDTNVFIAAFEMTGAHSDHAWWILKGIEAGTIIGVTSEITLAEVLVKPMERDDEALADAYEGMIAPAPYFETV SVGRDVLTTAARLRAGRHSLRLPDAIHVASAQIAQCSVFITQDERIALPDDLRRLGVTPFTLDDILGQP
Sequences:
>Translated_149_residues MSVPRVYLDTNVFIAAFEMTGAHSDHAWWILKGIEAGTIIGVTSEITLAEVLVKPMERDDEALADAYEGMIAPAPYFETV SVGRDVLTTAARLRAGRHSLRLPDAIHVASAQIAQCSVFITQDERIALPDDLRRLGVTPFTLDDILGQP >Mature_148_residues SVPRVYLDTNVFIAAFEMTGAHSDHAWWILKGIEAGTIIGVTSEITLAEVLVKPMERDDEALADAYEGMIAPAPYFETVS VGRDVLTTAARLRAGRHSLRLPDAIHVASAQIAQCSVFITQDERIALPDDLRRLGVTPFTLDDILGQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16275; Mature: 16144
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPRVYLDTNVFIAAFEMTGAHSDHAWWILKGIEAGTIIGVTSEITLAEVLVKPMERDD CCCCEEEEECCEEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCH EALADAYEGMIAPAPYFETVSVGRDVLTTAARLRAGRHSLRLPDAIHVASAQIAQCSVFI HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCEEEEEEEE TQDERIALPDDLRRLGVTPFTLDDILGQP ECCCCEECCHHHHHHCCCCEEHHHHCCCC >Mature Secondary Structure SVPRVYLDTNVFIAAFEMTGAHSDHAWWILKGIEAGTIIGVTSEITLAEVLVKPMERDD CCCEEEEECCEEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCH EALADAYEGMIAPAPYFETVSVGRDVLTTAARLRAGRHSLRLPDAIHVASAQIAQCSVFI HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCEEEEEEEE TQDERIALPDDLRRLGVTPFTLDDILGQP ECCCCEECCHHHHHHCCCCEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA