Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is wbpY

Identifier: 158421674

GI number: 158421674

Start: 60784

End: 61911

Strand: Reverse

Name: wbpY

Synonym: AZC_0050

Alternate gene names: NA

Gene position: 61911-60784 (Counterclockwise)

Preceding gene: 158421675

Following gene: 158421670

Centisome position: 1.15

GC content: 57.27

Gene sequence:

>1128_bases
ATGAAGACCGTCTTTCTCGATATCACCGAACTCCGCGGCAATCCCGTCCGAACCGGTATACAGCGGATGGTGCGGCAACT
TCTGAAGGCGTGGCCCACCGATGTTGAGGCTGTGCCCGTGGTCTATGACAGCGTACGGGAGGCTCTGCGTATTATATCGC
AGGAGACCGTTGAATTTCTCATCGAGTCCGGCGACACGCCGAGTATGCCGCTTCGCGACGCCGTGGATCAGGTCAATTTT
CTTGATGACCCGGCACGGTCTCCGACCGTTACCCTTAGAGAGGGCGACAAGGTTCATATTCCTGAACTGTTTTTCGATGA
GAAGCGGACGGTTTTTCATCGAAAGGCGATCGCATCTGGCGTCGACCTGTCCGTATGGATTCCGGATTTTATACCTTGGC
TTCGCCCCGAATGCTTCCCGCGCATTCCCTCGTTTCATCCCTATATGCACTACCTTTGGCTGGTCTTCGAAGCGCGGAAG
AGAGCTTTCATAAGCGCTGCCGTGCGTGATGACTTCGAGTGCCGTATTTATCGGCGGCCCTCTCAGGGCACCATCGTCAC
AGACCTTGGGGCGGATGCGATCAATATCGGTCAGCAGACCTTCAATGCCGACCGGAAAGATCTGATCTTTCTGGGCACAC
TGGAGCCCCGTAAGGCCCAGCACGTCGTGTATAACGCTTTCATCGGACGTACCCGCCATCCTGACCTTAGGCTCACCTTC
ATCGGCGCTATTCCCGAGCATGGGATTCCCGCAGACTTCATGCCGTTGGTGAAGTCAAAAAGGCCCGACGTCCGTTTATT
GACGGAAGCCAATGACAGTGATGTAGCTGAAATATTCAAGGGCGCCCGTGCGACCGTTTATACCAGCCAAGTGGAGGGTT
ATGGCCTCCCGCCGATGGAGAGTCTCTACGCGGGCGTGCCGGTCATTGTACGCGACAACCTACCGGCCTTGGTTGGGAAA
CCGGATTTCGGTCAGCTCCGATTGGGGCGAGGGGACGAGGAAGACATTCGCTCCGCGATCGACATCATCGGCGATGACCA
GCGGTGCGCAGCCCTGTGGGAAGACGCAAGGCGCTTCCCCAGCAGGACCTGGCAAGCCGTCGCCCGTCAGATTGCCGACT
GGGCCTGA

Upstream 100 bases:

>100_bases
AACAGGCTCGTGCCGCCCATGCAGAACGGCAGCCGAAGGAATATTGCAGGCAGTTGTTGGCAGCGCTCGGCATAGATGCC
GGCGCGCTGAGTGCTAATCG

Downstream 100 bases:

>100_bases
ACGACGCGCCCCCGGAAGACCAGCCTGCGTTCTGAAGCGAAAGCGGCTGATCTTCGCGTCTCTTCAATACAAGAGTGCGC
CCGGTGACGCTTTAATGCAC

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKTVFLDITELRGNPVRTGIQRMVRQLLKAWPTDVEAVPVVYDSVREALRIISQETVEFLIESGDTPSMPLRDAVDQVNF
LDDPARSPTVTLREGDKVHIPELFFDEKRTVFHRKAIASGVDLSVWIPDFIPWLRPECFPRIPSFHPYMHYLWLVFEARK
RAFISAAVRDDFECRIYRRPSQGTIVTDLGADAINIGQQTFNADRKDLIFLGTLEPRKAQHVVYNAFIGRTRHPDLRLTF
IGAIPEHGIPADFMPLVKSKRPDVRLLTEANDSDVAEIFKGARATVYTSQVEGYGLPPMESLYAGVPVIVRDNLPALVGK
PDFGQLRLGRGDEEDIRSAIDIIGDDQRCAALWEDARRFPSRTWQAVARQIADWA

Sequences:

>Translated_375_residues
MKTVFLDITELRGNPVRTGIQRMVRQLLKAWPTDVEAVPVVYDSVREALRIISQETVEFLIESGDTPSMPLRDAVDQVNF
LDDPARSPTVTLREGDKVHIPELFFDEKRTVFHRKAIASGVDLSVWIPDFIPWLRPECFPRIPSFHPYMHYLWLVFEARK
RAFISAAVRDDFECRIYRRPSQGTIVTDLGADAINIGQQTFNADRKDLIFLGTLEPRKAQHVVYNAFIGRTRHPDLRLTF
IGAIPEHGIPADFMPLVKSKRPDVRLLTEANDSDVAEIFKGARATVYTSQVEGYGLPPMESLYAGVPVIVRDNLPALVGK
PDFGQLRLGRGDEEDIRSAIDIIGDDQRCAALWEDARRFPSRTWQAVARQIADWA
>Mature_375_residues
MKTVFLDITELRGNPVRTGIQRMVRQLLKAWPTDVEAVPVVYDSVREALRIISQETVEFLIESGDTPSMPLRDAVDQVNF
LDDPARSPTVTLREGDKVHIPELFFDEKRTVFHRKAIASGVDLSVWIPDFIPWLRPECFPRIPSFHPYMHYLWLVFEARK
RAFISAAVRDDFECRIYRRPSQGTIVTDLGADAINIGQQTFNADRKDLIFLGTLEPRKAQHVVYNAFIGRTRHPDLRLTF
IGAIPEHGIPADFMPLVKSKRPDVRLLTEANDSDVAEIFKGARATVYTSQVEGYGLPPMESLYAGVPVIVRDNLPALVGK
PDFGQLRLGRGDEEDIRSAIDIIGDDQRCAALWEDARRFPSRTWQAVARQIADWA

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42579; Mature: 42579

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVFLDITELRGNPVRTGIQRMVRQLLKAWPTDVEAVPVVYDSVREALRIISQETVEFL
CCEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IESGDTPSMPLRDAVDQVNFLDDPARSPTVTLREGDKVHIPELFFDEKRTVFHRKAIASG
HHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCEEECCHHHHCCHHHHHHHHHHHCC
VDLSVWIPDFIPWLRPECFPRIPSFHPYMHYLWLVFEARKRAFISAAVRDDFECRIYRRP
CCEEEECHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
SQGTIVTDLGADAINIGQQTFNADRKDLIFLGTLEPRKAQHVVYNAFIGRTRHPDLRLTF
CCCCEEEECCCCHHHHCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEE
IGAIPEHGIPADFMPLVKSKRPDVRLLTEANDSDVAEIFKGARATVYTSQVEGYGLPPME
EECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCHH
SLYAGVPVIVRDNLPALVGKPDFGQLRLGRGDEEDIRSAIDIIGDDQRCAALWEDARRFP
HHHCCCCEEEECCCCCEECCCCCCCEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC
SRTWQAVARQIADWA
CHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTVFLDITELRGNPVRTGIQRMVRQLLKAWPTDVEAVPVVYDSVREALRIISQETVEFL
CCEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IESGDTPSMPLRDAVDQVNFLDDPARSPTVTLREGDKVHIPELFFDEKRTVFHRKAIASG
HHCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCEEECCHHHHCCHHHHHHHHHHHCC
VDLSVWIPDFIPWLRPECFPRIPSFHPYMHYLWLVFEARKRAFISAAVRDDFECRIYRRP
CCEEEECHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
SQGTIVTDLGADAINIGQQTFNADRKDLIFLGTLEPRKAQHVVYNAFIGRTRHPDLRLTF
CCCCEEEECCCCHHHHCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEE
IGAIPEHGIPADFMPLVKSKRPDVRLLTEANDSDVAEIFKGARATVYTSQVEGYGLPPME
EECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCHH
SLYAGVPVIVRDNLPALVGKPDFGQLRLGRGDEEDIRSAIDIIGDDQRCAALWEDARRFP
HHHCCCCEEEECCCCCEECCCCCCCEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC
SRTWQAVARQIADWA
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA