Click here to switch to the map view.

The map label for this gene is 158338995

Identifier: 158338995

GI number: 158338995

Start: 5979332

End: 5980219

Strand: Reverse

Name: 158338995

Synonym: AM1_5914

Alternate gene names: NA

Gene position: 5980219-5979332 (Counterclockwise)

Preceding gene: 158338997

Following gene: 158338994

Centisome position: 91.95

GC content: 48.09

Gene sequence:

>888_bases
ATGAATTCCACGAAAGAATCATCCGCTTGGAAAATTAACGGGTTTGGGGTGTTGCCCATTCTCTTATTGTTTTTGGGGAT
CAGTAGTTGGTATTTATTTCCCTTTGTTCTATTTGAGAAAGCATTAGCAGGGCCACAACTCTGGCTAGGGTCTGGATTAT
TTGCTATGGCAGGGATATTGGCTAGTGGTTTTTTCCTAGTCGATCCGAATCAGGCTCGGGTATTAATTTTGCTAGGAAAA
TATATCGGCAGTATCCGTGAACCAGGTTTTTACTGGACCATTCCTTTCATCGTCAGTAAGCGCCCAGTCTCCCTGCGGGT
TCGCAACTTCAACAGTGAAAGATTGAAGGTCAATGATGCCCAGGGCAGTCCGATTGAGATTGCAGCAGTTGTCGTTTGGC
GAGTGATTGATTCAGCCAAGGCCACCCTGGATGTCGAAAGCTGCCGCGACTTCGTCGCGATTCAAAGTGAGACGGCCCTC
CGGAGTTTAGCCAACCGCTATGCCTACGATATTTTTGACAATACCCAGGAGTCTTTGCGGGGGAATCCTGATCAAATTTC
CGACCTGCTTAAACAGGAAGTCCAGCGTCGGTTAGACGTTGCTGGGGTTGATATTATCGAAACTCGAATTACTCACCTGG
CCTATGCCCCTGAAATTGCCCAAGCGATGCTTCGTCGCCAACAAGCGATCGCAGTGATTGCAGCCAAAGAGCGAATCGTC
GAAGGTGCCTTAGGCATGGTAGAAATGGCACTGCATCGGTTGAGTGAGCAACAGGTGGTAGACCTGGATGAAGAACGGAA
AGCTGCTATGGTAAACAACTTACTGGTGGCCCTGGTTTCTGAAAGTTCAACACAGCCGATCATTAATGCTGGAACCCTGT
ATACGTGA

Upstream 100 bases:

>100_bases
ACGTTAGCGAGACTTGGCCTTCCATGACAAACGGTAACAGCAATGTCAAAGTGATATCACTTTGCTATCTTAGTGATATG
GATTCAAAGGAAACAAAGAT

Downstream 100 bases:

>100_bases
GCAAAAAGAAGCGCTTCTTATTACGACTTGATCAGGCTCTTTACGACACCCTCGAACGTTGGGCGGCGGATGAGTTGCGC
AGCGTCAATGCTCAAATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Somatin-Like Protein; Band 7 Family Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Transmembrane Protein; HFLK Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Membrane Protease Subunit Stomatin/Prohibitin

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNSTKESSAWKINGFGVLPILLLFLGISSWYLFPFVLFEKALAGPQLWLGSGLFAMAGILASGFFLVDPNQARVLILLGK
YIGSIREPGFYWTIPFIVSKRPVSLRVRNFNSERLKVNDAQGSPIEIAAVVVWRVIDSAKATLDVESCRDFVAIQSETAL
RSLANRYAYDIFDNTQESLRGNPDQISDLLKQEVQRRLDVAGVDIIETRITHLAYAPEIAQAMLRRQQAIAVIAAKERIV
EGALGMVEMALHRLSEQQVVDLDEERKAAMVNNLLVALVSESSTQPIINAGTLYT

Sequences:

>Translated_295_residues
MNSTKESSAWKINGFGVLPILLLFLGISSWYLFPFVLFEKALAGPQLWLGSGLFAMAGILASGFFLVDPNQARVLILLGK
YIGSIREPGFYWTIPFIVSKRPVSLRVRNFNSERLKVNDAQGSPIEIAAVVVWRVIDSAKATLDVESCRDFVAIQSETAL
RSLANRYAYDIFDNTQESLRGNPDQISDLLKQEVQRRLDVAGVDIIETRITHLAYAPEIAQAMLRRQQAIAVIAAKERIV
EGALGMVEMALHRLSEQQVVDLDEERKAAMVNNLLVALVSESSTQPIINAGTLYT
>Mature_295_residues
MNSTKESSAWKINGFGVLPILLLFLGISSWYLFPFVLFEKALAGPQLWLGSGLFAMAGILASGFFLVDPNQARVLILLGK
YIGSIREPGFYWTIPFIVSKRPVSLRVRNFNSERLKVNDAQGSPIEIAAVVVWRVIDSAKATLDVESCRDFVAIQSETAL
RSLANRYAYDIFDNTQESLRGNPDQISDLLKQEVQRRLDVAGVDIIETRITHLAYAPEIAQAMLRRQQAIAVIAAKERIV
EGALGMVEMALHRLSEQQVVDLDEERKAAMVNNLLVALVSESSTQPIINAGTLYT

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32725; Mature: 32725

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTKESSAWKINGFGVLPILLLFLGISSWYLFPFVLFEKALAGPQLWLGSGLFAMAGIL
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHH
ASGFFLVDPNQARVLILLGKYIGSIREPGFYWTIPFIVSKRPVSLRVRNFNSERLKVNDA
HCCCEEECCCCCEEEEEEHHHHHHHCCCCEEEEEEHEECCCCEEEEEECCCCCEEEEECC
QGSPIEIAAVVVWRVIDSAKATLDVESCRDFVAIQSETALRSLANRYAYDIFDNTQESLR
CCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
GNPDQISDLLKQEVQRRLDVAGVDIIETRITHLAYAPEIAQAMLRRQQAIAVIAAKERIV
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGALGMVEMALHRLSEQQVVDLDEERKAAMVNNLLVALVSESSTQPIINAGTLYT
HHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC
>Mature Secondary Structure
MNSTKESSAWKINGFGVLPILLLFLGISSWYLFPFVLFEKALAGPQLWLGSGLFAMAGIL
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHH
ASGFFLVDPNQARVLILLGKYIGSIREPGFYWTIPFIVSKRPVSLRVRNFNSERLKVNDA
HCCCEEECCCCCEEEEEEHHHHHHHCCCCEEEEEEHEECCCCEEEEEECCCCCEEEEECC
QGSPIEIAAVVVWRVIDSAKATLDVESCRDFVAIQSETALRSLANRYAYDIFDNTQESLR
CCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
GNPDQISDLLKQEVQRRLDVAGVDIIETRITHLAYAPEIAQAMLRRQQAIAVIAAKERIV
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGALGMVEMALHRLSEQQVVDLDEERKAAMVNNLLVALVSESSTQPIINAGTLYT
HHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA