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The map label for this gene is yebA [C]

Identifier: 158338959

GI number: 158338959

Start: 5934956

End: 5935864

Strand: Reverse

Name: yebA [C]

Synonym: AM1_5876

Alternate gene names: 158338959

Gene position: 5935864-5934956 (Counterclockwise)

Preceding gene: 158338960

Following gene: 158338952

Centisome position: 91.27

GC content: 55.89

Gene sequence:

>909_bases
ATGAAGCAACCCAAAATTTGTCCTGTCATTTCCCCTCGTATAAGGCGTCGGGCTTTTCTCTCGATGGTGGGGGCAATGGT
CAGCACAGTCGCCAGCGGTCGCCTTTGGAGTCCTGCTGCTCATGCCTACGAGGTGACACTCTCACCAACGAACCCCAGGC
TAGGCGATACCATCTCGGTCGTGATCTCTAGCGCTTCAACGGCTGGCACTGCCCCAGTTGTTTCCGTCAACGGCACCAAC
TATCCCAGCTTTCAGGTATCCGGCAATCGTTACCGGGCATTGATTCCCACTAGTCCACTAGATACCCCTGGACAGCTAAC
ATTGAATGTTTCTGCCTCAGACTCATCGCGTCGCCTAACCGTAAACCTGGCAGATCGCTCCTTCGCCACCCAACGCATTT
GGCTCCCCTCGGGCAGCAGCGACTTGGGGACCGATCACGAATTTGACCGCGTCGACAAATTCAAGCGCATCGTCACCCCA
AAGCGTTATTGGAAAGGCGCGCTGGCCCGCCCTAGCCAGGGCTATGTCAGTACTGAATTTGGTGTCCGGCGATATTACAA
CGGCGTGTTTGCTAAAGACTATTACCACCGAGGTGTAGATTACGCTGCCGCGACTGGTTCGCCCGTTGTCGCTCCAGCGG
CAGGTTATGTCCGGCTAGTGGGAAGAGTGGTTGACGGCTTCGAACTCCACGGCAACACTGTCGGTATCGATCACGGTCAG
GGTGTGTTGAGCATTATGATTCACCTGAGCCGCATAGACGTTGCCGAAGGAGACTTTGTCACTACCGGGCAGAGGATCGG
CGGTGTTGGATCAACAGGAGCATCAACCGGCCCCCACCTGCACTGGGGTCTTTACCTGCATGGGGTAGCAGTTGATCCAG
TTCCCTGGCGCTCTAAAGGTGTTGAGTAG

Upstream 100 bases:

>100_bases
AAGACGTTCTTGGATAAGTTTTTTTTTATATTTTTCTCTTACCTAAGTTGGAATGGTTACGCTTGTAAACAAGAAATTGA
GCTTTGAATCCCTTTAAGCT

Downstream 100 bases:

>100_bases
TCATCAAATCTCTCTTGGGGTAAAAGCTCTTATGCTTGGCTTGTTTTACCCCAATCATGCCCAAATAGACCGAATTATTA
GTATAAGTGTTCTGTATTTT

Product: peptidase M23 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKQPKICPVISPRIRRRAFLSMVGAMVSTVASGRLWSPAAHAYEVTLSPTNPRLGDTISVVISSASTAGTAPVVSVNGTN
YPSFQVSGNRYRALIPTSPLDTPGQLTLNVSASDSSRRLTVNLADRSFATQRIWLPSGSSDLGTDHEFDRVDKFKRIVTP
KRYWKGALARPSQGYVSTEFGVRRYYNGVFAKDYYHRGVDYAAATGSPVVAPAAGYVRLVGRVVDGFELHGNTVGIDHGQ
GVLSIMIHLSRIDVAEGDFVTTGQRIGGVGSTGASTGPHLHWGLYLHGVAVDPVPWRSKGVE

Sequences:

>Translated_302_residues
MKQPKICPVISPRIRRRAFLSMVGAMVSTVASGRLWSPAAHAYEVTLSPTNPRLGDTISVVISSASTAGTAPVVSVNGTN
YPSFQVSGNRYRALIPTSPLDTPGQLTLNVSASDSSRRLTVNLADRSFATQRIWLPSGSSDLGTDHEFDRVDKFKRIVTP
KRYWKGALARPSQGYVSTEFGVRRYYNGVFAKDYYHRGVDYAAATGSPVVAPAAGYVRLVGRVVDGFELHGNTVGIDHGQ
GVLSIMIHLSRIDVAEGDFVTTGQRIGGVGSTGASTGPHLHWGLYLHGVAVDPVPWRSKGVE
>Mature_302_residues
MKQPKICPVISPRIRRRAFLSMVGAMVSTVASGRLWSPAAHAYEVTLSPTNPRLGDTISVVISSASTAGTAPVVSVNGTN
YPSFQVSGNRYRALIPTSPLDTPGQLTLNVSASDSSRRLTVNLADRSFATQRIWLPSGSSDLGTDHEFDRVDKFKRIVTP
KRYWKGALARPSQGYVSTEFGVRRYYNGVFAKDYYHRGVDYAAATGSPVVAPAAGYVRLVGRVVDGFELHGNTVGIDHGQ
GVLSIMIHLSRIDVAEGDFVTTGQRIGGVGSTGASTGPHLHWGLYLHGVAVDPVPWRSKGVE

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=132, Percent_Identity=37.8787878787879, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 32467; Mature: 32467

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPKICPVISPRIRRRAFLSMVGAMVSTVASGRLWSPAAHAYEVTLSPTNPRLGDTISV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEE
VISSASTAGTAPVVSVNGTNYPSFQVSGNRYRALIPTSPLDTPGQLTLNVSASDSSRRLT
EEECCCCCCCCCEEEECCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEE
VNLADRSFATQRIWLPSGSSDLGTDHEFDRVDKFKRIVTPKRYWKGALARPSQGYVSTEF
EEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCEECHH
GVRRYYNGVFAKDYYHRGVDYAAATGSPVVAPAAGYVRLVGRVVDGFELHGNTVGIDHGQ
HHHHHHCCCHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHCCEEECCCEEECCCCC
GVLSIMIHLSRIDVAEGDFVTTGQRIGGVGSTGASTGPHLHWGLYLHGVAVDPVPWRSKG
CHHHHHHHHHHCEECCCCEEECCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCC
VE
CC
>Mature Secondary Structure
MKQPKICPVISPRIRRRAFLSMVGAMVSTVASGRLWSPAAHAYEVTLSPTNPRLGDTISV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEE
VISSASTAGTAPVVSVNGTNYPSFQVSGNRYRALIPTSPLDTPGQLTLNVSASDSSRRLT
EEECCCCCCCCCEEEECCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEE
VNLADRSFATQRIWLPSGSSDLGTDHEFDRVDKFKRIVTPKRYWKGALARPSQGYVSTEF
EEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCEECHH
GVRRYYNGVFAKDYYHRGVDYAAATGSPVVAPAAGYVRLVGRVVDGFELHGNTVGIDHGQ
HHHHHHCCCHHHHHHHCCCCEEECCCCCEEECCHHHHHHHHHHHCCEEECCCEEECCCCC
GVLSIMIHLSRIDVAEGDFVTTGQRIGGVGSTGASTGPHLHWGLYLHGVAVDPVPWRSKG
CHHHHHHHHHHCEECCCCEEECCHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCC
VE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]