| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is gloB
Identifier: 158338875
GI number: 158338875
Start: 5870820
End: 5871593
Strand: Reverse
Name: gloB
Synonym: AM1_5788
Alternate gene names: 158338875
Gene position: 5871593-5870820 (Counterclockwise)
Preceding gene: 158338879
Following gene: 158338871
Centisome position: 90.28
GC content: 50.78
Gene sequence:
>774_bases ATGCAAATCCACCGACTACCGGCCTTTTCCGATAACTACATTTTTGTCCTCCATGATCCTGGGCAGAATATTGCCGCCGT GGTTGATCCAGCCGATCCTCAGCCCGTACTGAAGAAATTGGCAGAGTTGGGGGCTGAGCTGGTCGCCATCTTCAATACCC ATCACCATTCGGATCATGTGGGGGGCAATCGAACCCTCCTCCAGGCTTTTCCCAACACCGTTGTTTATGGAGGAGAGCAG GATCGAGGTCGGATTCCCGGCCAGCAACACTTTCTAAAAGAAGGCGATCAAGTCTCTTTTGCTCATCGCAGGGCTGAGGT TTACTTTGTTCCCGGCCATACCCGAGCCCATATTGCCTATTACTTCCCCCCTACGACAGGAGAAGAATGGGGGGAACTGT TTTGTGGCGATACCTTGTTCGCAGGGGGATGTGGACGTTTGTTTGAGGGCACTCCGGCCCAGATGGTGGACTCTTTAAGC AAGCTGCGCAACTTACCGGAGACCACCCGAGTCTGGTGTGCCCACGAATATACCCTCAAAAATTTGCAGTTTGCCCTGAC GGTAGATTCAGACAATTCACACCTAAAAAATCGCTTTAAACAGGTGCAAAACGCTCGGAATCTATCCCAACCGACTGTTC CCTCTGATATTGGCTTGGAAAAACAGACCAACCCCTTTCTGCGGTGGGATCAGCCCCATTTAATTATCCATACCAAAAGC AATACCCCGGTCCAGTGTTTTGCACGGCTACGGGGTATGAAAGATCAGTTTTAA
Upstream 100 bases:
>100_bases GTCGCAAGGTGGCTGATGTCAGCAGTGCAACCCGGCTTTCAACAACGGTTGGAGTCGCAAAATAATAAGATATCAGTGAT ATAGAATTTTGCGATCGCCC
Downstream 100 bases:
>100_bases TAGGTGTAATAGAGAAACTAGCTGAGGGCATTCAGGCCGCAGGCCGCCACCGCTAAAACGGCAACGCAAGCGTAAAAGGT GGATACAACCCGGACTTCGG
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MQIHRLPAFSDNYIFVLHDPGQNIAAVVDPADPQPVLKKLAELGAELVAIFNTHHHSDHVGGNRTLLQAFPNTVVYGGEQ DRGRIPGQQHFLKEGDQVSFAHRRAEVYFVPGHTRAHIAYYFPPTTGEEWGELFCGDTLFAGGCGRLFEGTPAQMVDSLS KLRNLPETTRVWCAHEYTLKNLQFALTVDSDNSHLKNRFKQVQNARNLSQPTVPSDIGLEKQTNPFLRWDQPHLIIHTKS NTPVQCFARLRGMKDQF
Sequences:
>Translated_257_residues MQIHRLPAFSDNYIFVLHDPGQNIAAVVDPADPQPVLKKLAELGAELVAIFNTHHHSDHVGGNRTLLQAFPNTVVYGGEQ DRGRIPGQQHFLKEGDQVSFAHRRAEVYFVPGHTRAHIAYYFPPTTGEEWGELFCGDTLFAGGCGRLFEGTPAQMVDSLS KLRNLPETTRVWCAHEYTLKNLQFALTVDSDNSHLKNRFKQVQNARNLSQPTVPSDIGLEKQTNPFLRWDQPHLIIHTKS NTPVQCFARLRGMKDQF >Mature_257_residues MQIHRLPAFSDNYIFVLHDPGQNIAAVVDPADPQPVLKKLAELGAELVAIFNTHHHSDHVGGNRTLLQAFPNTVVYGGEQ DRGRIPGQQHFLKEGDQVSFAHRRAEVYFVPGHTRAHIAYYFPPTTGEEWGELFCGDTLFAGGCGRLFEGTPAQMVDSLS KLRNLPETTRVWCAHEYTLKNLQFALTVDSDNSHLKNRFKQVQNARNLSQPTVPSDIGLEKQTNPFLRWDQPHLIIHTKS NTPVQCFARLRGMKDQF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
GO:0004416: Hydroxyacylglutathione hydrolase
GO:0008270: Hydroxyacylglutathione hydrolase
GO:0016787: Hydroxyacylglutathione hydrolase
GO:0046872: Hydroxyacylglutathione hydrolase
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family
Homologues:
Organism=Homo sapiens, GI94538322, Length=258, Percent_Identity=35.6589147286822, Blast_Score=177, Evalue=9e-45, Organism=Homo sapiens, GI94538320, Length=258, Percent_Identity=35.6589147286822, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI21703352, Length=223, Percent_Identity=39.0134529147982, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI116642887, Length=223, Percent_Identity=39.0134529147982, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI14150041, Length=257, Percent_Identity=32.6848249027237, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI46361987, Length=210, Percent_Identity=34.2857142857143, Blast_Score=132, Evalue=2e-31, Organism=Escherichia coli, GI1786406, Length=261, Percent_Identity=42.5287356321839, Blast_Score=187, Evalue=9e-49, Organism=Caenorhabditis elegans, GI17536925, Length=253, Percent_Identity=35.5731225296443, Blast_Score=155, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17538952, Length=186, Percent_Identity=27.4193548387097, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320478, Length=267, Percent_Identity=30.7116104868914, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6324614, Length=234, Percent_Identity=32.9059829059829, Blast_Score=94, Evalue=2e-20, Organism=Drosophila melanogaster, GI21356335, Length=260, Percent_Identity=40.7692307692308, Blast_Score=197, Evalue=7e-51, Organism=Drosophila melanogaster, GI24667711, Length=260, Percent_Identity=40.7692307692308, Blast_Score=196, Evalue=9e-51, Organism=Drosophila melanogaster, GI24667703, Length=260, Percent_Identity=40.7692307692308, Blast_Score=196, Evalue=1e-50, Organism=Drosophila melanogaster, GI221330176, Length=177, Percent_Identity=31.638418079096, Blast_Score=77, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLO2_ACAM1 (B0BZI8)
Other databases:
- EMBL: CP000828 - RefSeq: YP_001520052.1 - ProteinModelPortal: B0BZI8 - SMR: B0BZI8 - GeneID: 5684575 - GenomeReviews: CP000828_GR - KEGG: amr:AM1_5788 - HOGENOM: HBG753931 - OMA: WCAHEYT - BioCyc: AMAR329726:AM1_5788-MONOMER - HAMAP: MF_01374 - InterPro: IPR001279 - InterPro: IPR017782 - SMART: SM00849 - TIGRFAMs: TIGR03413
Pfam domain/function: PF00753 Lactamase_B
EC number: =3.1.2.6
Molecular weight: Translated: 29006; Mature: 29006
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIHRLPAFSDNYIFVLHDPGQNIAAVVDPADPQPVLKKLAELGAELVAIFNTHHHSDHV CCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC GGNRTLLQAFPNTVVYGGEQDRGRIPGQQHFLKEGDQVSFAHRRAEVYFVPGHTRAHIAY CCCCHHHHHCCCEEEECCCCCCCCCCCHHHHHHCCCCEEEEECCEEEEEECCCCEEEEEE YFPPTTGEEWGELFCGDTLFAGGCGRLFEGTPAQMVDSLSKLRNLPETTRVWCAHEYTLK EECCCCCHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHEEEEEEEEEEC NLQFALTVDSDNSHLKNRFKQVQNARNLSQPTVPSDIGLEKQTNPFLRWDQPHLIIHTKS CEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECC NTPVQCFARLRGMKDQF CCHHHHHHHHCCCCCCC >Mature Secondary Structure MQIHRLPAFSDNYIFVLHDPGQNIAAVVDPADPQPVLKKLAELGAELVAIFNTHHHSDHV CCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC GGNRTLLQAFPNTVVYGGEQDRGRIPGQQHFLKEGDQVSFAHRRAEVYFVPGHTRAHIAY CCCCHHHHHCCCEEEECCCCCCCCCCCHHHHHHCCCCEEEEECCEEEEEECCCCEEEEEE YFPPTTGEEWGELFCGDTLFAGGCGRLFEGTPAQMVDSLSKLRNLPETTRVWCAHEYTLK EECCCCCHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHEEEEEEEEEEC NLQFALTVDSDNSHLKNRFKQVQNARNLSQPTVPSDIGLEKQTNPFLRWDQPHLIIHTKS CEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECC NTPVQCFARLRGMKDQF CCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA