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The map label for this gene is ccmK [H]

Identifier: 158338865

GI number: 158338865

Start: 5859383

End: 5859727

Strand: Direct

Name: ccmK [H]

Synonym: AM1_5778

Alternate gene names: 158338865

Gene position: 5859383-5859727 (Clockwise)

Preceding gene: 158338864

Following gene: 158338866

Centisome position: 90.09

GC content: 49.86

Gene sequence:

>345_bases
ATGACGAATGGGGTTGTCTCTCAGCAAGCCGTGGGGGCATTGGAAACATCTGGGTTGCCAGGGAATCTTTCAATTGCGGA
TGCCATGATCAAGGCTGGCCGGGTCACTTTAGTGAGTTACATCAAGGGCGGTAGTGCTCGATTTGCCATTTGTTTTAGAG
GTGATGTCTCCGAAGTGAAGCGGGCTATGGATGCTGGGATTGCTGTGGTGGAGAACACCTATGGGGCGGTATTACATACA
TGGGTGATTATCCCTCGTCCTCATCCCAATGTAGAGCGAGTTCTACCTATCGGTTACCCACCTGAAGTTGAAGAATATCG
TCTGCAAGCCAATGAAGGGAAATAG

Upstream 100 bases:

>100_bases
TAGCCAGTATGTGTAATCTGGCATCATCGGTGGGAGCAACAATTCATTCTTTGGAATCTTTACGAGATTGAATTATATTT
TTTGATTAGGAGATTGACGA

Downstream 100 bases:

>100_bases
TGGCAGCTTCTTGCAGTAAATTCAAAATCCAATACAGCTTTCTCTTCAATCTGCTGTCAACAATGTAGTGTTTTCAGAAT
TTGGTAATGACGCGTTTAGC

Product: carbon dioxide concentrating mechanism protein CcmK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MTNGVVSQQAVGALETSGLPGNLSIADAMIKAGRVTLVSYIKGGSARFAICFRGDVSEVKRAMDAGIAVVENTYGAVLHT
WVIIPRPHPNVERVLPIGYPPEVEEYRLQANEGK

Sequences:

>Translated_114_residues
MTNGVVSQQAVGALETSGLPGNLSIADAMIKAGRVTLVSYIKGGSARFAICFRGDVSEVKRAMDAGIAVVENTYGAVLHT
WVIIPRPHPNVERVLPIGYPPEVEEYRLQANEGK
>Mature_113_residues
TNGVVSQQAVGALETSGLPGNLSIADAMIKAGRVTLVSYIKGGSARFAICFRGDVSEVKRAMDAGIAVVENTYGAVLHTW
VIIPRPHPNVERVLPIGYPPEVEEYRLQANEGK

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 12192; Mature: 12061

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNGVVSQQAVGALETSGLPGNLSIADAMIKAGRVTLVSYIKGGSARFAICFRGDVSEVK
CCCCCCCHHHHCHHCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCHHHHH
RAMDAGIAVVENTYGAVLHTWVIIPRPHPNVERVLPIGYPPEVEEYRLQANEGK
HHHHCCEEEEECCCCCEEEEEEEEECCCCCHHEEEECCCCCCHHHEEEECCCCC
>Mature Secondary Structure 
TNGVVSQQAVGALETSGLPGNLSIADAMIKAGRVTLVSYIKGGSARFAICFRGDVSEVK
CCCCCCHHHHCHHCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCHHHHH
RAMDAGIAVVENTYGAVLHTWVIIPRPHPNVERVLPIGYPPEVEEYRLQANEGK
HHHHCCEEEEECCCCCEEEEEEEEECCCCCHHEEEECCCCCCHHHEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]