Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158338853

Identifier: 158338853

GI number: 158338853

Start: 5847599

End: 5848276

Strand: Direct

Name: 158338853

Synonym: AM1_5766

Alternate gene names: NA

Gene position: 5847599-5848276 (Clockwise)

Preceding gene: 158338852

Following gene: 158338854

Centisome position: 89.91

GC content: 34.22

Gene sequence:

>678_bases
ATGACTAATAGATTTCAACATGTCAGAGAGCTATATGACCAGAGTTATAAACTATATGGAGACTCTCCTGCATCTCTACT
TACACCAAAAGGTCGAAGTGAACTTCGATTTAGAGCAATAGATCCATATTTAATTAGGAGCAATGTCCGTGTTCTCGACT
ATGGGTGTGGCTTAGGATATTTGTATGAATACCTAAACCAATCAGGTTTTGAGGTTAATTATACAGGTATAGATATATTG
CCTTCATTTATAAATGCCTGCCGCGATAAATATCCTGACTGTGCCAATTTTCATCAAATAGAACCTGAGTCAAATATCAC
TGGTGAATATGATGTAGTTTTTGCATCTGGGGTGTTTAACTTGGTTAGTAGTAAAGACGAAGAATCATCTAAATCTTATG
CCTATAACCGAATTAAACATCTATTTGAGATTACTCGTGAAGTTTTAGTCTGCGATTTTTTAAGTCCATATGTAGATTTT
AAGCAAGAGTTAGCACAGCACTTTTCGATTGATGAAATCGCAAATTTATGTTCAAAATCACTTACTCGTCGCTTTATGAT
TCGCCATGACTTACTGCCTTATGAATTTACATTGATTGCGCATCAAAAATCAAAAATTAAACGCCCTGAAAATTTTTTTG
AAGTTGATGCTAACTTAAGCTTCAAAGGTGAAATATAA

Upstream 100 bases:

>100_bases
TCGATACTTAAATCAAGTTATGGATCCTGATTTTAAGTTTCAATCGAAGAATGCTCTCGTAAAATCTTTTCCATTCTTCT
ATCTATTTAAATATTGAAAT

Downstream 100 bases:

>100_bases
AATGAATTTTGCCATCGTTGGGGGAGGGATAACTGGCTTAATTGCAGCTAAAATTCTAAATGATAAATACCCTAATAGTA
ACATTACGCTCATTGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTNRFQHVRELYDQSYKLYGDSPASLLTPKGRSELRFRAIDPYLIRSNVRVLDYGCGLGYLYEYLNQSGFEVNYTGIDIL
PSFINACRDKYPDCANFHQIEPESNITGEYDVVFASGVFNLVSSKDEESSKSYAYNRIKHLFEITREVLVCDFLSPYVDF
KQELAQHFSIDEIANLCSKSLTRRFMIRHDLLPYEFTLIAHQKSKIKRPENFFEVDANLSFKGEI

Sequences:

>Translated_225_residues
MTNRFQHVRELYDQSYKLYGDSPASLLTPKGRSELRFRAIDPYLIRSNVRVLDYGCGLGYLYEYLNQSGFEVNYTGIDIL
PSFINACRDKYPDCANFHQIEPESNITGEYDVVFASGVFNLVSSKDEESSKSYAYNRIKHLFEITREVLVCDFLSPYVDF
KQELAQHFSIDEIANLCSKSLTRRFMIRHDLLPYEFTLIAHQKSKIKRPENFFEVDANLSFKGEI
>Mature_224_residues
TNRFQHVRELYDQSYKLYGDSPASLLTPKGRSELRFRAIDPYLIRSNVRVLDYGCGLGYLYEYLNQSGFEVNYTGIDILP
SFINACRDKYPDCANFHQIEPESNITGEYDVVFASGVFNLVSSKDEESSKSYAYNRIKHLFEITREVLVCDFLSPYVDFK
QELAQHFSIDEIANLCSKSLTRRFMIRHDLLPYEFTLIAHQKSKIKRPENFFEVDANLSFKGEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26200; Mature: 26069

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNRFQHVRELYDQSYKLYGDSPASLLTPKGRSELRFRAIDPYLIRSNVRVLDYGCGLGY
CCCHHHHHHHHHHCCEEECCCCCCHHCCCCCCCCEEEEECCCEEECCCCEEEEECCCHHH
LYEYLNQSGFEVNYTGIDILPSFINACRDKYPDCANFHQIEPESNITGEYDVVFASGVFN
HHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHH
LVSSKDEESSKSYAYNRIKHLFEITREVLVCDFLSPYVDFKQELAQHFSIDEIANLCSKS
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LTRRFMIRHDLLPYEFTLIAHQKSKIKRPENFFEVDANLSFKGEI
HHHHHHHHHCCCCEEEEEEEECHHHCCCCCCCEEECCCEEECCCC
>Mature Secondary Structure 
TNRFQHVRELYDQSYKLYGDSPASLLTPKGRSELRFRAIDPYLIRSNVRVLDYGCGLGY
CCHHHHHHHHHHCCEEECCCCCCHHCCCCCCCCEEEEECCCEEECCCCEEEEECCCHHH
LYEYLNQSGFEVNYTGIDILPSFINACRDKYPDCANFHQIEPESNITGEYDVVFASGVFN
HHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHH
LVSSKDEESSKSYAYNRIKHLFEITREVLVCDFLSPYVDFKQELAQHFSIDEIANLCSKS
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LTRRFMIRHDLLPYEFTLIAHQKSKIKRPENFFEVDANLSFKGEI
HHHHHHHHHCCCCEEEEEEEECHHHCCCCCCCEEECCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA