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The map label for this gene is 158338839

Identifier: 158338839

GI number: 158338839

Start: 5829911

End: 5830699

Strand: Direct

Name: 158338839

Synonym: AM1_5752

Alternate gene names: NA

Gene position: 5829911-5830699 (Clockwise)

Preceding gene: 158338838

Following gene: 158338841

Centisome position: 89.64

GC content: 48.92

Gene sequence:

>789_bases
ATGAGTGCTGTCCTCCGCAAAATCACGACCTTCTTGACCGTCTATTACGCTTATATGTTGGAATACCGAGCAGAATTGCT
GCTATGGGTATTAGCCAACTCACTCCCTCTAATCATGATGGGAGTCTGGTCTCAAGCCGCTACAGAGGGGCAATTTCCCC
TCACAGCCCTAGACTTTGCTCGCTATTTTATCTCTGTCTTTATTGTTCGGCAATTTACTATCGTTTGGGTGATTTGGGAC
TTTGAGCGGGAAATCGTCGAAGGCAAACTTTCTCCTCGATTACTCCAACCCATCGATCCCGTCTGGCACCATGTCGCTGG
CCATGTATCTGAGCGATTGGCCCGCCTTCCCTTTTCCGCCGGATTAGTCATTCTATTTTTCGTTCTTTATCCTCAAGCCT
TCTGGTGGCCTAGCCCCCTGGGCTTGGTTTGGGGGTGCTTGGCAACAGCCTTAGCCTTTATTCTGCGCTTTATTATTCAA
TACACCTTTGCCATATTTGCGTTTTGGGCTGAACGGGCCACGGCGATTGAACAACTATGGTTTTTATTTTATTTGTTCCT
ATCGGGAATGATTGCTCCCCTCGATTTATTCCCGCAAGCGGTTCAGGCGGTTGTGGTGTGGACCCCCTTCCCTTATCTCA
TCTATTTCCCTGTTAGCCTCTTAATCGGACTGCCAACGCCTATTGCTAAGGGCTTTGGTATCATGCTGGCCTGGTGTGTG
TTGGGCCTAGTAATGAATCGCTGGCTGTGGCGTCGAGGCATCAAACATTACTCAGGAATGGGAGCTTAG

Upstream 100 bases:

>100_bases
TCTCCCAAATTTTGGCCAATCTCCAGGTACTGGACTTAACCATTACAGATCCTCCCATCGAGGAAATTATTCGGCGAGTC
TTTCAATCGGGCAAAGTCAC

Downstream 100 bases:

>100_bases
GGTCTCAAGCAGCAATGGCTTGAGTAATAGCTTGAGCCATCGCTTGGGAATCAACCCCTTCAAAACCAACGGGATTTAAA
TCAGCAGTCGTATCGACATG

Product: ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Inner Membrane Subunit; ABC Transporter Permease; ABC-2 Type Transport System Permease Protein; Abc Transporter Integral Membrane Protein; Multidrug ABC Transporter; Abc Transporter Permease Protein; ABC Transporter Permease Protein; ABC-Type Transport System Permease Component-Like; Integral Membrane Protein

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSAVLRKITTFLTVYYAYMLEYRAELLLWVLANSLPLIMMGVWSQAATEGQFPLTALDFARYFISVFIVRQFTIVWVIWD
FEREIVEGKLSPRLLQPIDPVWHHVAGHVSERLARLPFSAGLVILFFVLYPQAFWWPSPLGLVWGCLATALAFILRFIIQ
YTFAIFAFWAERATAIEQLWFLFYLFLSGMIAPLDLFPQAVQAVVVWTPFPYLIYFPVSLLIGLPTPIAKGFGIMLAWCV
LGLVMNRWLWRRGIKHYSGMGA

Sequences:

>Translated_262_residues
MSAVLRKITTFLTVYYAYMLEYRAELLLWVLANSLPLIMMGVWSQAATEGQFPLTALDFARYFISVFIVRQFTIVWVIWD
FEREIVEGKLSPRLLQPIDPVWHHVAGHVSERLARLPFSAGLVILFFVLYPQAFWWPSPLGLVWGCLATALAFILRFIIQ
YTFAIFAFWAERATAIEQLWFLFYLFLSGMIAPLDLFPQAVQAVVVWTPFPYLIYFPVSLLIGLPTPIAKGFGIMLAWCV
LGLVMNRWLWRRGIKHYSGMGA
>Mature_261_residues
SAVLRKITTFLTVYYAYMLEYRAELLLWVLANSLPLIMMGVWSQAATEGQFPLTALDFARYFISVFIVRQFTIVWVIWDF
EREIVEGKLSPRLLQPIDPVWHHVAGHVSERLARLPFSAGLVILFFVLYPQAFWWPSPLGLVWGCLATALAFILRFIIQY
TFAIFAFWAERATAIEQLWFLFYLFLSGMIAPLDLFPQAVQAVVVWTPFPYLIYFPVSLLIGLPTPIAKGFGIMLAWCVL
GLVMNRWLWRRGIKHYSGMGA

Specific function: Unknown

COG id: COG4587

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30228; Mature: 30097

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SAVLRKITTFLTVYYAYMLEYRAELLLWVLANSLPLIMMGVWSQAATEGQFPLTALDFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHH
RYFISVFIVRQFTIVWVIWDFEREIVEGKLSPRLLQPIDPVWHHVAGHVSERLARLPFSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHH
GLVILFFVLYPQAFWWPSPLGLVWGCLATALAFILRFIIQYTFAIFAFWAERATAIEQLW
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFYLFLSGMIAPLDLFPQAVQAVVVWTPFPYLIYFPVSLLIGLPTPIAKGFGIMLAWCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LGLVMNRWLWRRGIKHYSGMGA
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA