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The map label for this gene is 158338742

Identifier: 158338742

GI number: 158338742

Start: 5719952

End: 5720209

Strand: Direct

Name: 158338742

Synonym: AM1_5653

Alternate gene names: NA

Gene position: 5719952-5720209 (Clockwise)

Preceding gene: 158338741

Following gene: 158338743

Centisome position: 87.95

GC content: 46.9

Gene sequence:

>258_bases
ATGAATCGGGTGCAACCCTGGCAGGACCTTATCTTAGAGCCTCCTACAGTATTGGGGGTGGATGAATTCAATGAAAATCA
TCTGACGATTCGGTTGTGGATTAAGACTAAGCCGTTGAAGCAGTGGGATGTGGCTCGAGAGTATCGCCGTCGCCTTAAGA
ATGCCTTTGATCGAGAAGGCATTTCTAATCCTCTCCCCCACCGAACGATTCAGATTGAGAGTGCAAGTGAACTAAGCAAT
CTCAATGGTCGTAAATAG

Upstream 100 bases:

>100_bases
TTTGAGAACGACAGTTAGGGCAGGTCAATGTCGACATTTGTGATGCTGGATTTTGGATGTTGGATATATCTATCCTTACA
TCTGGCGGACTACCCAAGAG

Downstream 100 bases:

>100_bases
ACCTCTGACATAAATTACAAAGGGCGGTATGTATCGTTCTAGCCGATTTTTTAATCGTCCTCAAACGTATACCCAGGTAC
AGCCAGATATGACAGGATTT

Product: mechanosensitive ion channel

Products: NA

Alternate protein names: Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel; Transporter MscS Family; Mechanosensitive Ion Channel MscS; Mechanosensitive Ion Channel Family Protein; MscS Family Mechanosensitive Ion Channel; Small-Conductance Mechanosensitive Ion Channel; Mechanosensitive Ion Channel MscS Family Protein

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MNRVQPWQDLILEPPTVLGVDEFNENHLTIRLWIKTKPLKQWDVAREYRRRLKNAFDREGISNPLPHRTIQIESASELSN
LNGRK

Sequences:

>Translated_85_residues
MNRVQPWQDLILEPPTVLGVDEFNENHLTIRLWIKTKPLKQWDVAREYRRRLKNAFDREGISNPLPHRTIQIESASELSN
LNGRK
>Mature_85_residues
MNRVQPWQDLILEPPTVLGVDEFNENHLTIRLWIKTKPLKQWDVAREYRRRLKNAFDREGISNPLPHRTIQIESASELSN
LNGRK

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10089; Mature: 10089

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRVQPWQDLILEPPTVLGVDEFNENHLTIRLWIKTKPLKQWDVAREYRRRLKNAFDREG
CCCCCCHHHHHCCCCCEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
ISNPLPHRTIQIESASELSNLNGRK
CCCCCCCCEEEECCCHHHCCCCCCC
>Mature Secondary Structure
MNRVQPWQDLILEPPTVLGVDEFNENHLTIRLWIKTKPLKQWDVAREYRRRLKNAFDREG
CCCCCCHHHHHCCCCCEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
ISNPLPHRTIQIESASELSNLNGRK
CCCCCCCCEEEECCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA