| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158338696
Identifier: 158338696
GI number: 158338696
Start: 5667129
End: 5668358
Strand: Direct
Name: 158338696
Synonym: AM1_5604
Alternate gene names: NA
Gene position: 5667129-5668358 (Clockwise)
Preceding gene: 158338692
Following gene: 158338697
Centisome position: 87.14
GC content: 46.91
Gene sequence:
>1230_bases TTGGACTGGTCTACCCTTGGCGTTGTAATCGTGCCACCCATTGCTGGTGGCATCATTGGCTATTTCACCAATGACCTTGC CATTTCAATGTTGTTTAAGCCCTATCGAGCCATCAAAATAGGCGATCGTCGGCTTCCTTTTACTCCAGGGCTTATTCCTC GCAACCAAGAACGGTTAGCCCAAAAGGTGTCTGACGCAATCATGACCTCCCTGCTAACCCCAGAAGAGTTACAAGCCATT GCCCAGCGATTGCTGCAAACTGAACGGGTACAAGGCGCTATTTTTTGGCTACTCCAACTTGCCTTAGATCAAGTCAAATC TGATACGGGTCAAAGAACCGCCCAAATTTTAGCCAACATCCTTAGGGATTTTGCTGATCAATCCTTACCTCGCATCATTG TGGCTCTAGCCCGTCGCGAAGATTTTCTCCAAGATCAGCTGGACCAAGTGTTCGATCAAGTACTCCTGGACTTACAGCTG ACAGATGACCAAGCCCAACAGCTCGCCAACTGGATTATTAATGTTGTAGTACCACCGGACACCCTACGACTACTGTTGAT TGACTTCCTGACCGACCGCAATATTGCGATCCTAGATCGCGATCTACGCACCAAAACCAGTGGAACCTATTGGTTAGTCG CCAATGTAATGGGAGTCCAAAGTAGCTTAGTGAAATTGCGGACCTTCTGTATCGAAGAGAAGTTAGCGTGTAACGCGATA GTGGCAGAATTACTGACATCCCTGGGAATTCGTCAACGGTTTGTCGAATGGCTAGCCAGTTTATCGCTACAAAACCTACC CGTTCGCACCGTGCGACAGCTCCGGCAGCAGTTTCGTGAAAGCGTACGAGGATATACCCAAAACAAAGGAATTTCCGTAT TGCAAAACCTTGGGACTTCCGTAGATTGGGATGAAACCGCCATGCTAATTGTCAAACGATTGCAGACTTCTGAAGTTGTT ACAACATCTCTCAAAGACATCAGTGAAGATTTAGCCTTGATCTTGGAGCGATACTTGGAGCGTGATTTAGAAATGATTGT GGTGAAAGCCCTGCCCATTTTAAATTTGGACCAGGTGATCATCGATCGCGTCAACCACACTGCCCCAGAGGATCTAGAGG CAGCGATTCAGGGCATCGTCAAAACTGAACTCCAAGCCATCGTCATTTTAGGAGGGGTTCTGGGAATTGTAATTGGATTA TTGCAGTCCTTAATTCTGTTATTTTCCTGA
Upstream 100 bases:
>100_bases ACCTATGTCTACATTTCGACTTTTCTAAGATCGCACCTTGATTAATTGAGGGTAAGCTTTTTGCAGAGGGCACTATTTGT GCATTGATGAGGCGAACAGA
Downstream 100 bases:
>100_bases CAAACAAGGCGACCAATCTCGATAATCTGAGGCAGGAAAAGTTCCACAACAAGATGTCATTTTCTGTTTGAAGTGCGGCT AGGTTTAAGAGTCAATCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MDWSTLGVVIVPPIAGGIIGYFTNDLAISMLFKPYRAIKIGDRRLPFTPGLIPRNQERLAQKVSDAIMTSLLTPEELQAI AQRLLQTERVQGAIFWLLQLALDQVKSDTGQRTAQILANILRDFADQSLPRIIVALARREDFLQDQLDQVFDQVLLDLQL TDDQAQQLANWIINVVVPPDTLRLLLIDFLTDRNIAILDRDLRTKTSGTYWLVANVMGVQSSLVKLRTFCIEEKLACNAI VAELLTSLGIRQRFVEWLASLSLQNLPVRTVRQLRQQFRESVRGYTQNKGISVLQNLGTSVDWDETAMLIVKRLQTSEVV TTSLKDISEDLALILERYLERDLEMIVVKALPILNLDQVIIDRVNHTAPEDLEAAIQGIVKTELQAIVILGGVLGIVIGL LQSLILLFS
Sequences:
>Translated_409_residues MDWSTLGVVIVPPIAGGIIGYFTNDLAISMLFKPYRAIKIGDRRLPFTPGLIPRNQERLAQKVSDAIMTSLLTPEELQAI AQRLLQTERVQGAIFWLLQLALDQVKSDTGQRTAQILANILRDFADQSLPRIIVALARREDFLQDQLDQVFDQVLLDLQL TDDQAQQLANWIINVVVPPDTLRLLLIDFLTDRNIAILDRDLRTKTSGTYWLVANVMGVQSSLVKLRTFCIEEKLACNAI VAELLTSLGIRQRFVEWLASLSLQNLPVRTVRQLRQQFRESVRGYTQNKGISVLQNLGTSVDWDETAMLIVKRLQTSEVV TTSLKDISEDLALILERYLERDLEMIVVKALPILNLDQVIIDRVNHTAPEDLEAAIQGIVKTELQAIVILGGVLGIVIGL LQSLILLFS >Mature_409_residues MDWSTLGVVIVPPIAGGIIGYFTNDLAISMLFKPYRAIKIGDRRLPFTPGLIPRNQERLAQKVSDAIMTSLLTPEELQAI AQRLLQTERVQGAIFWLLQLALDQVKSDTGQRTAQILANILRDFADQSLPRIIVALARREDFLQDQLDQVFDQVLLDLQL TDDQAQQLANWIINVVVPPDTLRLLLIDFLTDRNIAILDRDLRTKTSGTYWLVANVMGVQSSLVKLRTFCIEEKLACNAI VAELLTSLGIRQRFVEWLASLSLQNLPVRTVRQLRQQFRESVRGYTQNKGISVLQNLGTSVDWDETAMLIVKRLQTSEVV TTSLKDISEDLALILERYLERDLEMIVVKALPILNLDQVIIDRVNHTAPEDLEAAIQGIVKTELQAIVILGGVLGIVIGL LQSLILLFS
Specific function: Unknown
COG id: COG4399
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0754 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y5604_ACAM1 (B0CF38)
Other databases:
- EMBL: CP000828 - RefSeq: YP_001519873.1 - GeneID: 5684394 - GenomeReviews: CP000828_GR - KEGG: amr:AM1_5604 - HOGENOM: HBG286546 - OMA: PPIAGGI - ProtClustDB: CLSK893453 - BioCyc: AMAR329726:AM1_5604-MONOMER - InterPro: IPR007383 - InterPro: IPR016991 - PIRSF: PIRSF032178
Pfam domain/function: PF04286 DUF445
EC number: NA
Molecular weight: Translated: 45948; Mature: 45948
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x157877a4)-; HASH(0x15277050)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWSTLGVVIVPPIAGGIIGYFTNDLAISMLFKPYRAIKIGDRRLPFTPGLIPRNQERLA CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCHHHHH QKVSDAIMTSLLTPEELQAIAQRLLQTERVQGAIFWLLQLALDQVKSDTGQRTAQILANI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LRDFADQSLPRIIVALARREDFLQDQLDQVFDQVLLDLQLTDDQAQQLANWIINVVVPPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCH TLRLLLIDFLTDRNIAILDRDLRTKTSGTYWLVANVMGVQSSLVKLRTFCIEEKLACNAI HHHHHHHHHHCCCCEEEEECHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAELLTSLGIRQRFVEWLASLSLQNLPVRTVRQLRQQFRESVRGYTQNKGISVLQNLGTS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC VDWDETAMLIVKRLQTSEVVTTSLKDISEDLALILERYLERDLEMIVVKALPILNLDQVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IDRVNHTAPEDLEAAIQGIVKTELQAIVILGGVLGIVIGLLQSLILLFS HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MDWSTLGVVIVPPIAGGIIGYFTNDLAISMLFKPYRAIKIGDRRLPFTPGLIPRNQERLA CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCHHHHH QKVSDAIMTSLLTPEELQAIAQRLLQTERVQGAIFWLLQLALDQVKSDTGQRTAQILANI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LRDFADQSLPRIIVALARREDFLQDQLDQVFDQVLLDLQLTDDQAQQLANWIINVVVPPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCH TLRLLLIDFLTDRNIAILDRDLRTKTSGTYWLVANVMGVQSSLVKLRTFCIEEKLACNAI HHHHHHHHHHCCCCEEEEECHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAELLTSLGIRQRFVEWLASLSLQNLPVRTVRQLRQQFRESVRGYTQNKGISVLQNLGTS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC VDWDETAMLIVKRLQTSEVVTTSLKDISEDLALILERYLERDLEMIVVKALPILNLDQVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IDRVNHTAPEDLEAAIQGIVKTELQAIVILGGVLGIVIGLLQSLILLFS HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA