| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338692
Identifier: 158338692
GI number: 158338692
Start: 5660153
End: 5661181
Strand: Direct
Name: 158338692
Synonym: AM1_5600
Alternate gene names: NA
Gene position: 5660153-5661181 (Clockwise)
Preceding gene: 158338691
Following gene: 158338696
Centisome position: 87.03
GC content: 48.98
Gene sequence:
>1029_bases GTGCGATCGCAACTTTCCTCCCTCCACAATCAAGCTTTCCTTAATTCCATCTTCTTTCTGATTCCATCACCCATCATGCT CCGAAAACTTGTCGCAGCCCTGGCTTGGATCCCTCTATTAGCAACCCCCGGAAAACTGAAGGCTCAAGTTGCCAAGGAAG CTCCATCGCTTGTGACCTTCCCCGATGTGGGTGTTGCGATACTGCAGCCGTCAGGATTTGAGAAAGCAGAAAGCTTCTAT GGCTTTCAGCAACCTTCCACTGGGGCATCGGTGATAGTGTTAGCCATTCCAGGACCCTTTTCAGAGGTGACTCAGGGGTT TACGAAACCGGTTCTGTCAGAAAAAGGAATGACCCTGCACTCTAAGGAGTTAACTGAAGTTAAGGGGCAGTCTGGCGTCA AGATGTATTTTTCTCAGCAAGCCCATGGCCAGGAATTTCTGAAGTGGGCAGTGCTTTTTGGTGATACCGAACGAACAACA ATGGTTGTGGCTACCGCTCCCAAGTCCCATGCATCTAAGCTAAGACACTCACTGCAAACGGTTCTTCAGTCCGTTGAACC TTCTCAAATGGCAGCAGCTCCCCTTCCCTTCGAGATTGAAGCGTCTGCTGACCTAACCCAAGTCCAAGGGGTGGCAATGG GGAATACCGCCCTCTTCACCCGAAATGGAACAATTCCTACTGCTACTCCGAATGAGCCAATGTTTATTGTGGCGTTATCG ATTGGGGAGGTATTCGCTGGGAATCGTAAAGAATATGCACGACGGCGGTTGTTGGAAACAGCCCAAACTGAAATTGAATC GGTCCAGACCACTACACCTATAACCATCGATGGGCTAGAGGGCTATGAACTGACTGCGACGGGCAAAGATCAAAAATCTC AAACTCCCTTGATGCTTTATCAGGTCATGCTTTTCCCGGATGAAGGGGGATGTATTCTGATGACGGGAATGGTCGGTCAA GAGCAAGCCAAGAGGTATTTGCCCCAATTTAAGGCAATGGCATCAACATTCAGTTGCAACTTCAAATGA
Upstream 100 bases:
>100_bases AGAAGAACAGTTTCAGCAGCAGTACTTTCAAGCCGTTTCGGTAGATGTGATGGGTGGAATCATTGCTGACCAGCAGGATC CTGATGATGCGATGCCCTAG
Downstream 100 bases:
>100_bases TAATTTTCTTCGCATGGAAAGCCAAAAAAATCCAATTTTTAGAAAAATTACTACTTCTGAATCACTAATGCACTATCTAG TCATAGGGGCAGCATTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MRSQLSSLHNQAFLNSIFFLIPSPIMLRKLVAALAWIPLLATPGKLKAQVAKEAPSLVTFPDVGVAILQPSGFEKAESFY GFQQPSTGASVIVLAIPGPFSEVTQGFTKPVLSEKGMTLHSKELTEVKGQSGVKMYFSQQAHGQEFLKWAVLFGDTERTT MVVATAPKSHASKLRHSLQTVLQSVEPSQMAAAPLPFEIEASADLTQVQGVAMGNTALFTRNGTIPTATPNEPMFIVALS IGEVFAGNRKEYARRRLLETAQTEIESVQTTTPITIDGLEGYELTATGKDQKSQTPLMLYQVMLFPDEGGCILMTGMVGQ EQAKRYLPQFKAMASTFSCNFK
Sequences:
>Translated_342_residues MRSQLSSLHNQAFLNSIFFLIPSPIMLRKLVAALAWIPLLATPGKLKAQVAKEAPSLVTFPDVGVAILQPSGFEKAESFY GFQQPSTGASVIVLAIPGPFSEVTQGFTKPVLSEKGMTLHSKELTEVKGQSGVKMYFSQQAHGQEFLKWAVLFGDTERTT MVVATAPKSHASKLRHSLQTVLQSVEPSQMAAAPLPFEIEASADLTQVQGVAMGNTALFTRNGTIPTATPNEPMFIVALS IGEVFAGNRKEYARRRLLETAQTEIESVQTTTPITIDGLEGYELTATGKDQKSQTPLMLYQVMLFPDEGGCILMTGMVGQ EQAKRYLPQFKAMASTFSCNFK >Mature_342_residues MRSQLSSLHNQAFLNSIFFLIPSPIMLRKLVAALAWIPLLATPGKLKAQVAKEAPSLVTFPDVGVAILQPSGFEKAESFY GFQQPSTGASVIVLAIPGPFSEVTQGFTKPVLSEKGMTLHSKELTEVKGQSGVKMYFSQQAHGQEFLKWAVLFGDTERTT MVVATAPKSHASKLRHSLQTVLQSVEPSQMAAAPLPFEIEASADLTQVQGVAMGNTALFTRNGTIPTATPNEPMFIVALS IGEVFAGNRKEYARRRLLETAQTEIESVQTTTPITIDGLEGYELTATGKDQKSQTPLMLYQVMLFPDEGGCILMTGMVGQ EQAKRYLPQFKAMASTFSCNFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37185; Mature: 37185
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSQLSSLHNQAFLNSIFFLIPSPIMLRKLVAALAWIPLLATPGKLKAQVAKEAPSLVTF CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEC PDVGVAILQPSGFEKAESFYGFQQPSTGASVIVLAIPGPFSEVTQGFTKPVLSEKGMTLH CCCCEEEECCCCCHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEE SKELTEVKGQSGVKMYFSQQAHGQEFLKWAVLFGDTERTTMVVATAPKSHASKLRHSLQT HHHHHHHCCCCCEEEEECCCCHHHHHHHHHEEECCCCCEEEEEEECCHHHHHHHHHHHHH VLQSVEPSQMAAAPLPFEIEASADLTQVQGVAMGNTALFTRNGTIPTATPNEPMFIVALS HHHHCCCHHHHCCCCCEEEECCCCHHHHCCEEECCEEEEEECCCCCCCCCCCCEEEEEEE IGEVFAGNRKEYARRRLLETAQTEIESVQTTTPITIDGLEGYELTATGKDQKSQTPLMLY CCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCEEEE QVMLFPDEGGCILMTGMVGQEQAKRYLPQFKAMASTFSCNFK EEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRSQLSSLHNQAFLNSIFFLIPSPIMLRKLVAALAWIPLLATPGKLKAQVAKEAPSLVTF CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEC PDVGVAILQPSGFEKAESFYGFQQPSTGASVIVLAIPGPFSEVTQGFTKPVLSEKGMTLH CCCCEEEECCCCCHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEE SKELTEVKGQSGVKMYFSQQAHGQEFLKWAVLFGDTERTTMVVATAPKSHASKLRHSLQT HHHHHHHCCCCCEEEEECCCCHHHHHHHHHEEECCCCCEEEEEEECCHHHHHHHHHHHHH VLQSVEPSQMAAAPLPFEIEASADLTQVQGVAMGNTALFTRNGTIPTATPNEPMFIVALS HHHHCCCHHHHCCCCCEEEECCCCHHHHCCEEECCEEEEEECCCCCCCCCCCCEEEEEEE IGEVFAGNRKEYARRRLLETAQTEIESVQTTTPITIDGLEGYELTATGKDQKSQTPLMLY CCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCCCCCEEEE QVMLFPDEGGCILMTGMVGQEQAKRYLPQFKAMASTFSCNFK EEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA