| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338674
Identifier: 158338674
GI number: 158338674
Start: 5634339
End: 5635691
Strand: Reverse
Name: 158338674
Synonym: AM1_5578
Alternate gene names: NA
Gene position: 5635691-5634339 (Counterclockwise)
Preceding gene: 158338677
Following gene: 158338669
Centisome position: 86.65
GC content: 48.56
Gene sequence:
>1353_bases ATGTTGTCCCTGATCTCTGCTCTACTTGTTGCTCAATCTTCTGCACCTGCCAAACCTGAGATTGTTGTCCAGCCACAGGA AGTTAGAGCGCTACCAGGTCAACTTGATTCAGTCATGGTATTTAACAGCAATAGTCCTGAAGTCGTCCAAACGGAAGGAA TCTTGTTATCTACCTTCCCAGGGACAGATAAAGCAGTTCCAACCGCACATCTTAACCAGCACTTACAAGGCCGGTTCGAT GTATTCACCCACCATATTGCAAAAGCCACGGCCCCCGATGACTTAAAGACTTTATATATGGGGGTGCTCTTACACAATCC AGGCCAAACTCCTGTCACAGTGAATATACTTCAAGCAGCGAGTTACTTAAGTCAGCCCGATGCTCCATTTATCCCTTTAG ATAACTATTTGCCTAATCCCAACGGAGCCGTTTATGCGGGCCCGGGGGGGCGGGCCACTGATGATGTCTTGAGGGGCAAG AGACAAGATAGTTGGCCCGCTCAAATCATCATTCCAGCAGGCGAAAGTCGAATGCTATTGAACGTCCCTATCCCAGTGAA GAAATTAGACCCACCCATCAATGGTCGATCTACGCTAGCGAGGTTACGCAGTACGGGGAAAGTCTATGCAGCCAGTCTAG CGATGTTTGCCCCAACCAATACAGAAGGAGAGGAGCGTGAACCCACTCTGTCCGAATGGGAACAACTGCTTCAAGAGGGA AAGTTGTCTGGTCCTAGAGACAAAACCCCTACCCCACCTGGACAACCAGGGCAATTAATTTACGGTCGAGTTGCAGGAGT CGCAAAAGGCTCTATCTGGAGGGTTCAAATCACCGATCCCGATTCTAAAGGCTATACCCTTAAGATTCCAGAGATAGGCA AAGCTTTCTCTTATGTCTTGAGTAGTGTTGATCGAGGAACCTTTGGAACTCAACAGATCCAGAGTGCACCGATGATCGTT CGCTATCCAGATACAGCCTATGCTGCCCATGGCAACTATGGGATTCAATATAGCCTGAATCTACCGCTCCACAATTCCAG TGACCAAGCTAAGAAGGTTGCCATTACATTTCAAACCCCAATCAAAAATGATCAAAGTGAGGGAAATCTCCAATTTTTTG AGCCTCCTGCCAAACAGGTGTTCTTTCGGGGAACCGTTAGAGCCCGTTATCAGGATGACCAGGGACGTCCCCAGACTCGC TATGTGCATTTTGTTCAACATCGAGGGGAGCCTGCCCAAGCCTTGGTGAATTTGGAAATCGCGCCCCAGGATATTCGCCT GGTTCAAGTTGATTTCCTCTATCCACCGGATTCCACGCCACCGCAGGTATTAACGGTACAGACCCAAGAATAG
Upstream 100 bases:
>100_bases TTATTAAGTAGATGATCGAAAGTGGACCTTAACCTATGGGAGAACCGTCATCTACCAGTAAGATTTTCTTGTTCGTGATA CCTCTATTCGGTTCTTGCCT
Downstream 100 bases:
>100_bases TTAGGCATGGCGCTTTTGATGCCATTGCCACGCATGGCTGATGATTTTTTCTAAATCGGCATATTGGGGTTGCCAGTTCA AAATTTTGCGAGCCTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MLSLISALLVAQSSAPAKPEIVVQPQEVRALPGQLDSVMVFNSNSPEVVQTEGILLSTFPGTDKAVPTAHLNQHLQGRFD VFTHHIAKATAPDDLKTLYMGVLLHNPGQTPVTVNILQAASYLSQPDAPFIPLDNYLPNPNGAVYAGPGGRATDDVLRGK RQDSWPAQIIIPAGESRMLLNVPIPVKKLDPPINGRSTLARLRSTGKVYAASLAMFAPTNTEGEEREPTLSEWEQLLQEG KLSGPRDKTPTPPGQPGQLIYGRVAGVAKGSIWRVQITDPDSKGYTLKIPEIGKAFSYVLSSVDRGTFGTQQIQSAPMIV RYPDTAYAAHGNYGIQYSLNLPLHNSSDQAKKVAITFQTPIKNDQSEGNLQFFEPPAKQVFFRGTVRARYQDDQGRPQTR YVHFVQHRGEPAQALVNLEIAPQDIRLVQVDFLYPPDSTPPQVLTVQTQE
Sequences:
>Translated_450_residues MLSLISALLVAQSSAPAKPEIVVQPQEVRALPGQLDSVMVFNSNSPEVVQTEGILLSTFPGTDKAVPTAHLNQHLQGRFD VFTHHIAKATAPDDLKTLYMGVLLHNPGQTPVTVNILQAASYLSQPDAPFIPLDNYLPNPNGAVYAGPGGRATDDVLRGK RQDSWPAQIIIPAGESRMLLNVPIPVKKLDPPINGRSTLARLRSTGKVYAASLAMFAPTNTEGEEREPTLSEWEQLLQEG KLSGPRDKTPTPPGQPGQLIYGRVAGVAKGSIWRVQITDPDSKGYTLKIPEIGKAFSYVLSSVDRGTFGTQQIQSAPMIV RYPDTAYAAHGNYGIQYSLNLPLHNSSDQAKKVAITFQTPIKNDQSEGNLQFFEPPAKQVFFRGTVRARYQDDQGRPQTR YVHFVQHRGEPAQALVNLEIAPQDIRLVQVDFLYPPDSTPPQVLTVQTQE >Mature_450_residues MLSLISALLVAQSSAPAKPEIVVQPQEVRALPGQLDSVMVFNSNSPEVVQTEGILLSTFPGTDKAVPTAHLNQHLQGRFD VFTHHIAKATAPDDLKTLYMGVLLHNPGQTPVTVNILQAASYLSQPDAPFIPLDNYLPNPNGAVYAGPGGRATDDVLRGK RQDSWPAQIIIPAGESRMLLNVPIPVKKLDPPINGRSTLARLRSTGKVYAASLAMFAPTNTEGEEREPTLSEWEQLLQEG KLSGPRDKTPTPPGQPGQLIYGRVAGVAKGSIWRVQITDPDSKGYTLKIPEIGKAFSYVLSSVDRGTFGTQQIQSAPMIV RYPDTAYAAHGNYGIQYSLNLPLHNSSDQAKKVAITFQTPIKNDQSEGNLQFFEPPAKQVFFRGTVRARYQDDQGRPQTR YVHFVQHRGEPAQALVNLEIAPQDIRLVQVDFLYPPDSTPPQVLTVQTQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49232; Mature: 49232
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLISALLVAQSSAPAKPEIVVQPQEVRALPGQLDSVMVFNSNSPEVVQTEGILLSTFP CHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCEEEEECCCCCCEEEECCEEEEECC GTDKAVPTAHLNQHLQGRFDVFTHHIAKATAPDDLKTLYMGVLLHNPGQTPVTVNILQAA CCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCCCCEEEEHHHHH SYLSQPDAPFIPLDNYLPNPNGAVYAGPGGRATDDVLRGKRQDSWPAQIIIPAGESRMLL HHHCCCCCCEEECCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCEEEEEECCCCEEEE NVPIPVKKLDPPINGRSTLARLRSTGKVYAASLAMFAPTNTEGEEREPTLSEWEQLLQEG ECCCCHHHCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHC KLSGPRDKTPTPPGQPGQLIYGRVAGVAKGSIWRVQITDPDSKGYTLKIPEIGKAFSYVL CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEECCCHHHHHHHHH SSVDRGTFGTQQIQSAPMIVRYPDTAYAAHGNYGIQYSLNLPLHNSSDQAKKVAITFQTP HHCCCCCCCHHHHHCCCEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECC IKNDQSEGNLQFFEPPAKQVFFRGTVRARYQDDQGRPQTRYVHFVQHRGEPAQALVNLEI CCCCCCCCCEEEECCCHHHEEEEEEEEEEEECCCCCCHHHEEEEEHHCCCCHHEEEEEEE APQDIRLVQVDFLYPPDSTPPQVLTVQTQE CCCCEEEEEEEEEECCCCCCCCEEEEEECC >Mature Secondary Structure MLSLISALLVAQSSAPAKPEIVVQPQEVRALPGQLDSVMVFNSNSPEVVQTEGILLSTFP CHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCEEEEECCCCCCEEEECCEEEEECC GTDKAVPTAHLNQHLQGRFDVFTHHIAKATAPDDLKTLYMGVLLHNPGQTPVTVNILQAA CCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCCCCEEEEHHHHH SYLSQPDAPFIPLDNYLPNPNGAVYAGPGGRATDDVLRGKRQDSWPAQIIIPAGESRMLL HHHCCCCCCEEECCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCCEEEEEECCCCEEEE NVPIPVKKLDPPINGRSTLARLRSTGKVYAASLAMFAPTNTEGEEREPTLSEWEQLLQEG ECCCCHHHCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHC KLSGPRDKTPTPPGQPGQLIYGRVAGVAKGSIWRVQITDPDSKGYTLKIPEIGKAFSYVL CCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEECCCHHHHHHHHH SSVDRGTFGTQQIQSAPMIVRYPDTAYAAHGNYGIQYSLNLPLHNSSDQAKKVAITFQTP HHCCCCCCCHHHHHCCCEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECC IKNDQSEGNLQFFEPPAKQVFFRGTVRARYQDDQGRPQTRYVHFVQHRGEPAQALVNLEI CCCCCCCCCEEEECCCHHHEEEEEEEEEEEECCCCCCHHHEEEEEHHCCCCHHEEEEEEE APQDIRLVQVDFLYPPDSTPPQVLTVQTQE CCCCEEEEEEEEEECCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA