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The map label for this gene is yqhM [H]

Identifier: 158338667

GI number: 158338667

Start: 5629225

End: 5629983

Strand: Reverse

Name: yqhM [H]

Synonym: AM1_5570

Alternate gene names: 158338667

Gene position: 5629983-5629225 (Counterclockwise)

Preceding gene: 158338668

Following gene: 158338665

Centisome position: 86.57

GC content: 47.96

Gene sequence:

>759_bases
TTGGATTGGCGATTAATCCCTTACCTCCAGACCGATGGCATAACCCAGATGGCCATTGATCAATGGTTATTTAACCAATG
CCATCAAGGCAACCATCCACCCACATTGCGGTTTTATACCTGGACACCCGCAGCAATCTCTCTGGGGCGCAACCAGCTGA
CTTGGCCTCAACATTGGCAAGACCTAGCTTGGCAGGGTCGCCCAGTTGATTTGGTGCGCCGCCCAACAGGTGGTCGGGCG
GTTTTGCATGAAGGGGATTTGACCTATGGGATCATACTTTCGCATCCCCACCGCAATCGCCGTCAAGCGTATAAGGATCT
CTGTCAATTTTTAATTCAAGGTTGGCGAGAACTAGGGTACAACCTGCGCTTTGGCGAACCACGCCGAAACTATACTCACC
AAGCCAATTGCTTTGCGACTGCCACGAATGCCGATCTAGTTCTAGAGAATGGATACAAACTCATTGGTAGTGCCCAGGCT
TGGCAAGACCAAACGGTCTTGCAACATGGTTCAATGCGAATCAATCCCAGTCAAGAACTGACTGAACAGGTATTCAGACA
AGCTTTTGCTGAACATGACCCAACTCTCCACCCGATCCCAGAAAAAGCCATTATCTCTGCATTAATTGCAGCTGCAAAAA
CTTGCTTTGAAGCCACATTTACTTATGAACCGCTTTCTCCAAAAGAGCTGGAAGCTATCGAACAAGTAAAGTCGATGCAA
GCTGATACTAAAGTTGGCAACAATCTGGCTAGAAATTAG

Upstream 100 bases:

>100_bases
CCCCTGGGGAAATTTCTCATCTCATTACTCTAGTGGCCACCATTGCCGATGATCATGATGACGAATTGCAGGCCGAATTT
CCCGCTGCTGCTGTCTAATT

Downstream 100 bases:

>100_bases
TGTGAACTGGTTTCTGGTGTGGGTTCGGGAACCATCATATCTGCCATAACGGATCGGGCAATAGCTGGAAGCTGGAGGGT
GGAAGGATAACTGCCTTCGT

Product: biotin/lipoate A/B protein ligase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDWRLIPYLQTDGITQMAIDQWLFNQCHQGNHPPTLRFYTWTPAAISLGRNQLTWPQHWQDLAWQGRPVDLVRRPTGGRA
VLHEGDLTYGIILSHPHRNRRQAYKDLCQFLIQGWRELGYNLRFGEPRRNYTHQANCFATATNADLVLENGYKLIGSAQA
WQDQTVLQHGSMRINPSQELTEQVFRQAFAEHDPTLHPIPEKAIISALIAAAKTCFEATFTYEPLSPKELEAIEQVKSMQ
ADTKVGNNLARN

Sequences:

>Translated_252_residues
MDWRLIPYLQTDGITQMAIDQWLFNQCHQGNHPPTLRFYTWTPAAISLGRNQLTWPQHWQDLAWQGRPVDLVRRPTGGRA
VLHEGDLTYGIILSHPHRNRRQAYKDLCQFLIQGWRELGYNLRFGEPRRNYTHQANCFATATNADLVLENGYKLIGSAQA
WQDQTVLQHGSMRINPSQELTEQVFRQAFAEHDPTLHPIPEKAIISALIAAAKTCFEATFTYEPLSPKELEAIEQVKSMQ
ADTKVGNNLARN
>Mature_252_residues
MDWRLIPYLQTDGITQMAIDQWLFNQCHQGNHPPTLRFYTWTPAAISLGRNQLTWPQHWQDLAWQGRPVDLVRRPTGGRA
VLHEGDLTYGIILSHPHRNRRQAYKDLCQFLIQGWRELGYNLRFGEPRRNYTHQANCFATATNADLVLENGYKLIGSAQA
WQDQTVLQHGSMRINPSQELTEQVFRQAFAEHDPTLHPIPEKAIISALIAAAKTCFEATFTYEPLSPKELEAIEQVKSMQ
ADTKVGNNLARN

Specific function: Unknown

COG id: COG0095

COG function: function code H; Lipoate-protein ligase A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004143 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB [H]

EC number: NA

Molecular weight: Translated: 28916; Mature: 28916

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRLIPYLQTDGITQMAIDQWLFNQCHQGNHPPTLRFYTWTPAAISLGRNQLTWPQHWQ
CCCEEECEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCCCCCCHHHHH
DLAWQGRPVDLVRRPTGGRAVLHEGDLTYGIILSHPHRNRRQAYKDLCQFLIQGWRELGY
HHCCCCCCHHEEECCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
NLRFGEPRRNYTHQANCFATATNADLVLENGYKLIGSAQAWQDQTVLQHGSMRINPSQEL
CCCCCCCCCCCCCCCCEEEEECCCCEEEECCEEEEECCHHHHHHHHHHCCCEEECCHHHH
TEQVFRQAFAEHDPTLHPIPEKAIISALIAAAKTCFEATFTYEPLSPKELEAIEQVKSMQ
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHH
ADTKVGNNLARN
HHHHHHHHHCCC
>Mature Secondary Structure
MDWRLIPYLQTDGITQMAIDQWLFNQCHQGNHPPTLRFYTWTPAAISLGRNQLTWPQHWQ
CCCEEECEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCCCCCCHHHHH
DLAWQGRPVDLVRRPTGGRAVLHEGDLTYGIILSHPHRNRRQAYKDLCQFLIQGWRELGY
HHCCCCCCHHEEECCCCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCC
NLRFGEPRRNYTHQANCFATATNADLVLENGYKLIGSAQAWQDQTVLQHGSMRINPSQEL
CCCCCCCCCCCCCCCCEEEEECCCCEEEECCEEEEECCHHHHHHHHHHCCCEEECCHHHH
TEQVFRQAFAEHDPTLHPIPEKAIISALIAAAKTCFEATFTYEPLSPKELEAIEQVKSMQ
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHH
ADTKVGNNLARN
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]