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The map label for this gene is recA [H]

Identifier: 158338580

GI number: 158338580

Start: 5540510

End: 5541562

Strand: Reverse

Name: recA [H]

Synonym: AM1_5483

Alternate gene names: 158338580

Gene position: 5541562-5540510 (Counterclockwise)

Preceding gene: 158338585

Following gene: 158338578

Centisome position: 85.21

GC content: 51.38

Gene sequence:

>1053_bases
ATGGCCGCCATCACTGAAGTATCAGAAAAGCAAAAAGCCCTAGACTTAGTTTTGAAAAATGTGGAGCGCTCCTTTGGTAA
AGGGTCGATTATGCGCTTGGGTGATGCTGCTCGCATGCAGGTCGAAACCATCTCTAGTGGTGCTTTAACCTTGGATCTGG
CCTTGGGGGGTGGACTACCCCGCGGACGTGTGATTGAAATTTACGGCCCAGAAAGTTCGGGTAAAACCACCGTAGCGTTA
CATGCGATCGCACAAATCCAAAAAAACGGGGGCGTCGCTGCCTTCGTGGATGCTGAACATGCCCTCGACCCAGTTTATGC
CGCTGCCTTAGGCGTTGATGTCTCTGAACTCCTCGTCAGTCAGCCCGACTCTGGTGAAATGGCCTTAGAAATTGTCGATC
AGTTGGTGCGCTCCAGCGCTGTCGACCTTGTGGTCGTAGATTCTGTCGCCGCTCTCACCCCCCGCGCCGAAATTGAAGGG
GATATGGGCGACTCCCATATGGGCCTGCAGGCCCGGCTGATGAGTCAGGCCCTACGCAAAATCACCAGCAATATCTGCAA
GTCTGGTAGCACTGTGATCTTCTTGAATCAGCTTCGCCAGAAAATTGGCGTCACCTACGGTAGCCCCGAAGTCACTACGG
GTGGTAATGCCCTCAAGTTTTATGCCTCCGTTCGTCTGGATATTCGTCGGATCCAAACCCTGAAAAAAGGGACAGAGATG
TATGGCATCCGTGCAAAGGTCAAAGTGGCAAAGAATAAAGTCGCGCCCCCGTTTCGGATTGCCGAGTTCGATATTCTGTT
TGGACAGGGTATCTCCACCTTGGGCTGCTTAGTGGATATGGCCGAAGAAACCAATATCATCGTCCGAAAAGGGGCCTGGT
ATAGCTTTGACGGCAATAATATCGGTCAAGGTCGAGACAATACGATTCAATATTTTGCTGATAATCCTGAGTTTACCGAT
AGCGTGGAGCAACAGGTCCGTCAGCGATTAGAGTTGGGAGCTGAAGTTTCTGCCAATTCCGTTACGGCAGTAGAGGTAGA
CGCAGAAGCCTAA

Upstream 100 bases:

>100_bases
CCACACTGGCTGTAAATTTATATCTTTGTGCCGGGTTGACACATTTATAGTACAAGTATACTATATGAATTCAATCACCC
ACCTTTCTCAGGAGAGATGT

Downstream 100 bases:

>100_bases
TTTTCACAACAGAGACCAATCAGGGTATGGGTCTTCCATGCCCTTTTTTTAATCTAAGCCGATAATGCGCATTTCTCTAG
GGTTTGCATCGCCTTTTTGA

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MAAITEVSEKQKALDLVLKNVERSFGKGSIMRLGDAARMQVETISSGALTLDLALGGGLPRGRVIEIYGPESSGKTTVAL
HAIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVSQPDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEG
DMGDSHMGLQARLMSQALRKITSNICKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLKKGTEM
YGIRAKVKVAKNKVAPPFRIAEFDILFGQGISTLGCLVDMAEETNIIVRKGAWYSFDGNNIGQGRDNTIQYFADNPEFTD
SVEQQVRQRLELGAEVSANSVTAVEVDAEA

Sequences:

>Translated_350_residues
MAAITEVSEKQKALDLVLKNVERSFGKGSIMRLGDAARMQVETISSGALTLDLALGGGLPRGRVIEIYGPESSGKTTVAL
HAIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVSQPDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEG
DMGDSHMGLQARLMSQALRKITSNICKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLKKGTEM
YGIRAKVKVAKNKVAPPFRIAEFDILFGQGISTLGCLVDMAEETNIIVRKGAWYSFDGNNIGQGRDNTIQYFADNPEFTD
SVEQQVRQRLELGAEVSANSVTAVEVDAEA
>Mature_349_residues
AAITEVSEKQKALDLVLKNVERSFGKGSIMRLGDAARMQVETISSGALTLDLALGGGLPRGRVIEIYGPESSGKTTVALH
AIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVSQPDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEGD
MGDSHMGLQARLMSQALRKITSNICKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLKKGTEMY
GIRAKVKVAKNKVAPPFRIAEFDILFGQGISTLGCLVDMAEETNIIVRKGAWYSFDGNNIGQGRDNTIQYFADNPEFTDS
VEQQVRQRLELGAEVSANSVTAVEVDAEA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=322, Percent_Identity=60.8695652173913, Blast_Score=412, Evalue=1e-116,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37461; Mature: 37330

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAITEVSEKQKALDLVLKNVERSFGKGSIMRLGDAARMQVETISSGALTLDLALGGGLP
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHEEEEEECCCCEEEEEEECCCCC
RGRVIEIYGPESSGKTTVALHAIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVS
CCCEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECHHHHCHHHHHHHCCCHHHHHHC
QPDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRK
CCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHH
ITSNICKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLKKGTEM
HHHHHHCCCCEEEEHHHHHHHHCCCCCCCCEECCCCEEEEEEEHHHHHHHHHHHHCCCHH
YGIRAKVKVAKNKVAPPFRIAEFDILFGQGISTLGCLVDMAEETNIIVRKGAWYSFDGNN
EEEEEEEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCEEEECCCC
IGQGRDNTIQYFADNPEFTDSVEQQVRQRLELGAEVSANSVTAVEVDAEA
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
AAITEVSEKQKALDLVLKNVERSFGKGSIMRLGDAARMQVETISSGALTLDLALGGGLP
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHEEEEEECCCCEEEEEEECCCCC
RGRVIEIYGPESSGKTTVALHAIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVS
CCCEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECHHHHCHHHHHHHCCCHHHHHHC
QPDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRK
CCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHH
ITSNICKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLKKGTEM
HHHHHHCCCCEEEEHHHHHHHHCCCCCCCCEECCCCEEEEEEEHHHHHHHHHHHHCCCHH
YGIRAKVKVAKNKVAPPFRIAEFDILFGQGISTLGCLVDMAEETNIIVRKGAWYSFDGNN
EEEEEEEEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCEEEECCCC
IGQGRDNTIQYFADNPEFTDSVEQQVRQRLELGAEVSANSVTAVEVDAEA
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA