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The map label for this gene is 158338546

Identifier: 158338546

GI number: 158338546

Start: 5506056

End: 5507732

Strand: Direct

Name: 158338546

Synonym: AM1_5448

Alternate gene names: NA

Gene position: 5506056-5507732 (Clockwise)

Preceding gene: 158338543

Following gene: 158338547

Centisome position: 84.66

GC content: 48.78

Gene sequence:

>1677_bases
ATGCAACATCTATCGTGGATAAAATGGGGCAAAACAAGTTGCCTCACCGCAGCACTGATGATGAGTGGAGCATTGATTGT
GCCAGCTCAGGCTCAAGGAGATAATCCTGGTGCAAGTGAACTCCTGCCGACGGAAATTGATGAGCAACCCCTGCGTCTAC
CCACGAAAGATCCCAAAATACTGAATCCTGATCCGAAAATACTGGACGTACCGACTGCATCGCAAGATGTCACTATTGAT
CCGGACCTCGATCAAGCGATTACATTGGAGCAAGCTTTAGAGCTGGCTAAGCGCAATAATCGAGATTTACAGGTTGTGGA
ATTGCAGGTCCGCCAGTCAAAAGCAGCATTAGCAGAAGCCAAAGCCGCAGAACTCCCAACCATCAGTGCCCAAGCGAGCC
TCAACCGCACAGATTCTGCAACATCACGGATCATCAACGAGCAGCAAGTAGAAGCCCAAGTCGAAGGTATTGAAGATCAA
ATTCAGCAGCTACAAGCCCAATTACCTGGGGCAAATGCAGCTCAAACAGCGATTTTAAATCAGACGATTCAAGGATTGCA
GACTCAAATTCAAACCATTCGGGATCAGCCCCCTCTTTTTCCTTCAGTCAGCAATCTGTTCAACACTAGCGTTCAGCTAA
ACTACGATGTCTTCACTTCTGGACAACGCTCAGCTAGCATTCGCGCTGCTGAGTCTGCCCTTAAGGCCGCTGAAAAATCC
CTAGAAACCCAGTTACAGCAGCTGCGCCTAGACGTTTCAAATGACTATTACGATATGCAGCAGGCCGATGAGTTGGTCCA
GATTGCCAAGGCAGCGGTGAAAAATGCTGAAGAAACGTTGGATAATACTCGGGCCTTGGAACAGGCAGGTTTAGGCACTC
GATTTGATGTTCTACGTTCAGAAGTCCAGCTGGCAAACCAGCAGCAACAGCTCTCTCAAGCCCAAAGCCAACAGCTCACT
GCTCGACGCCAATTGGCTCAGCGCTTAAGCCTCAATCCCAAAGCAACTTTATCGGCTGCTGATCCGGTCAAAATTGCCGG
GTTATGGCCCATGTCCTTGACAAATACGATTGCCAAGGCCCAACAGAATCGGTCCGAACTTGGTGAGATATTAGACCAAA
GACAAATTGCCCAGCAGAATGAGCGATTGGTTAAAGGAAGTTTTGGCCCCCAGGTTAGTGTAGCTGCCAGTGGGAATTTT
GCGGTTGATTTGGACGACTTGACTGATGCCTTTGGCTATTCCCTGGGTGGACAGGTTACCAAGTTATTGTTTGATGGAGG
CGCGACCAAAGCCAACGCCCGACAGCAAGCCCTAGGGGCAAAAATTGCTGAGACTCAATTTGCCAATTTTAAAAATCTGG
TTCGGTTCCAGGTCGAGCAGAACTACTTTACCTTACAGTCCAGCTTTAAAAATATTGCGACCAATGAATGTGCGGTGATC
CAAGCAGAGCAAAGTTTAGAGCTAGCTCGATTGCGCTCCAAAGCAGGGATTGGGACTCAACTTGAAGTCAGTAACGCTGA
AACAGAACTCACGCGAACCCGCAGTAATCGCTTGCAGGCAATCATTGACTACAATCGCGCCTTAATTGCCCTGGAGCGTT
TTGTCGGCCATCGACAACAGCAGGCCAGAGTCGGTGAAGTTCCTTCCCCTGGGGAAAAACTTTGCAATCAGGCTTAA

Upstream 100 bases:

>100_bases
TAGCCTCCTTACTAATGCAAGATTTTTAGCCTATTAGACCACCAGCCAGAATCTAGATTTGGTAGAGTACTAGACGGAGA
CAGCAGGTCTGGGAGCCATT

Downstream 100 bases:

>100_bases
CGGGAAAGCTTAAATTTCTTCCTCATTGCTGCGTAATCTCACAATATTCATCTGATAACTAGACAAATGCGGGGTAGGTG
CCGCATTGGATCTGCATGAA

Product: outer membrane efflux protein

Products: NA

Alternate protein names: RND Family Outer Membrane Efflux Protein; Tranporter Outer Membrane Factor Family; Outer Membrane Efflux Family Protein

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MQHLSWIKWGKTSCLTAALMMSGALIVPAQAQGDNPGASELLPTEIDEQPLRLPTKDPKILNPDPKILDVPTASQDVTID
PDLDQAITLEQALELAKRNNRDLQVVELQVRQSKAALAEAKAAELPTISAQASLNRTDSATSRIINEQQVEAQVEGIEDQ
IQQLQAQLPGANAAQTAILNQTIQGLQTQIQTIRDQPPLFPSVSNLFNTSVQLNYDVFTSGQRSASIRAAESALKAAEKS
LETQLQQLRLDVSNDYYDMQQADELVQIAKAAVKNAEETLDNTRALEQAGLGTRFDVLRSEVQLANQQQQLSQAQSQQLT
ARRQLAQRLSLNPKATLSAADPVKIAGLWPMSLTNTIAKAQQNRSELGEILDQRQIAQQNERLVKGSFGPQVSVAASGNF
AVDLDDLTDAFGYSLGGQVTKLLFDGGATKANARQQALGAKIAETQFANFKNLVRFQVEQNYFTLQSSFKNIATNECAVI
QAEQSLELARLRSKAGIGTQLEVSNAETELTRTRSNRLQAIIDYNRALIALERFVGHRQQQARVGEVPSPGEKLCNQA

Sequences:

>Translated_558_residues
MQHLSWIKWGKTSCLTAALMMSGALIVPAQAQGDNPGASELLPTEIDEQPLRLPTKDPKILNPDPKILDVPTASQDVTID
PDLDQAITLEQALELAKRNNRDLQVVELQVRQSKAALAEAKAAELPTISAQASLNRTDSATSRIINEQQVEAQVEGIEDQ
IQQLQAQLPGANAAQTAILNQTIQGLQTQIQTIRDQPPLFPSVSNLFNTSVQLNYDVFTSGQRSASIRAAESALKAAEKS
LETQLQQLRLDVSNDYYDMQQADELVQIAKAAVKNAEETLDNTRALEQAGLGTRFDVLRSEVQLANQQQQLSQAQSQQLT
ARRQLAQRLSLNPKATLSAADPVKIAGLWPMSLTNTIAKAQQNRSELGEILDQRQIAQQNERLVKGSFGPQVSVAASGNF
AVDLDDLTDAFGYSLGGQVTKLLFDGGATKANARQQALGAKIAETQFANFKNLVRFQVEQNYFTLQSSFKNIATNECAVI
QAEQSLELARLRSKAGIGTQLEVSNAETELTRTRSNRLQAIIDYNRALIALERFVGHRQQQARVGEVPSPGEKLCNQA
>Mature_558_residues
MQHLSWIKWGKTSCLTAALMMSGALIVPAQAQGDNPGASELLPTEIDEQPLRLPTKDPKILNPDPKILDVPTASQDVTID
PDLDQAITLEQALELAKRNNRDLQVVELQVRQSKAALAEAKAAELPTISAQASLNRTDSATSRIINEQQVEAQVEGIEDQ
IQQLQAQLPGANAAQTAILNQTIQGLQTQIQTIRDQPPLFPSVSNLFNTSVQLNYDVFTSGQRSASIRAAESALKAAEKS
LETQLQQLRLDVSNDYYDMQQADELVQIAKAAVKNAEETLDNTRALEQAGLGTRFDVLRSEVQLANQQQQLSQAQSQQLT
ARRQLAQRLSLNPKATLSAADPVKIAGLWPMSLTNTIAKAQQNRSELGEILDQRQIAQQNERLVKGSFGPQVSVAASGNF
AVDLDDLTDAFGYSLGGQVTKLLFDGGATKANARQQALGAKIAETQFANFKNLVRFQVEQNYFTLQSSFKNIATNECAVI
QAEQSLELARLRSKAGIGTQLEVSNAETELTRTRSNRLQAIIDYNRALIALERFVGHRQQQARVGEVPSPGEKLCNQA

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60979; Mature: 60979

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHLSWIKWGKTSCLTAALMMSGALIVPAQAQGDNPGASELLPTEIDEQPLRLPTKDPKI
CCCCCCHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LNPDPKILDVPTASQDVTIDPDLDQAITLEQALELAKRNNRDLQVVELQVRQSKAALAEA
CCCCCCEEECCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHH
KAAELPTISAQASLNRTDSATSRIINEQQVEAQVEGIEDQIQQLQAQLPGANAAQTAILN
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QTIQGLQTQIQTIRDQPPLFPSVSNLFNTSVQLNYDVFTSGQRSASIRAAESALKAAEKS
HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
LETQLQQLRLDVSNDYYDMQQADELVQIAKAAVKNAEETLDNTRALEQAGLGTRFDVLRS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EVQLANQQQQLSQAQSQQLTARRQLAQRLSLNPKATLSAADPVKIAGLWPMSLTNTIAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCHHHHHHHHHH
QQNRSELGEILDQRQIAQQNERLVKGSFGPQVSVAASGNFAVDLDDLTDAFGYSLGGQVT
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCEEEEHHHHHHHHHHCCCCHHH
KLLFDGGATKANARQQALGAKIAETQFANFKNLVRFQVEQNYFTLQSSFKNIATNECAVI
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCEEEE
QAEQSLELARLRSKAGIGTQLEVSNAETELTRTRSNRLQAIIDYNRALIALERFVGHRQQ
ECHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QARVGEVPSPGEKLCNQA
HHHCCCCCCCHHHHCCCC
>Mature Secondary Structure
MQHLSWIKWGKTSCLTAALMMSGALIVPAQAQGDNPGASELLPTEIDEQPLRLPTKDPKI
CCCCCCHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LNPDPKILDVPTASQDVTIDPDLDQAITLEQALELAKRNNRDLQVVELQVRQSKAALAEA
CCCCCCEEECCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHH
KAAELPTISAQASLNRTDSATSRIINEQQVEAQVEGIEDQIQQLQAQLPGANAAQTAILN
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QTIQGLQTQIQTIRDQPPLFPSVSNLFNTSVQLNYDVFTSGQRSASIRAAESALKAAEKS
HHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
LETQLQQLRLDVSNDYYDMQQADELVQIAKAAVKNAEETLDNTRALEQAGLGTRFDVLRS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EVQLANQQQQLSQAQSQQLTARRQLAQRLSLNPKATLSAADPVKIAGLWPMSLTNTIAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCHHHHHHHHHH
QQNRSELGEILDQRQIAQQNERLVKGSFGPQVSVAASGNFAVDLDDLTDAFGYSLGGQVT
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCEEEEHHHHHHHHHHCCCCHHH
KLLFDGGATKANARQQALGAKIAETQFANFKNLVRFQVEQNYFTLQSSFKNIATNECAVI
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCEEEE
QAEQSLELARLRSKAGIGTQLEVSNAETELTRTRSNRLQAIIDYNRALIALERFVGHRQQ
ECHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QARVGEVPSPGEKLCNQA
HHHCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA