Click here to switch to the map view.

The map label for this gene is paaE [C]

Identifier: 158338540

GI number: 158338540

Start: 5501312

End: 5501611

Strand: Direct

Name: paaE [C]

Synonym: AM1_5442

Alternate gene names: 158338540

Gene position: 5501312-5501611 (Clockwise)

Preceding gene: 158338537

Following gene: 158338541

Centisome position: 84.59

GC content: 49.33

Gene sequence:

>300_bases
ATGGCCACCTATAACGTCAGACTGATCAATGAAGCGGAAGGCATCGACGCAACGATAGCGGTCGAAGATGATCAGTATAT
TTTTGACGCAGCAGAAGAGAATGATCTGGATTTACCTGTATCTTGCCGATCAGGGGCTTGTTCCAGTTGTGCCGGCAAGG
CCATCTCGGGAGAAGTAGACCAATCCGATCAATCCTTCTTAGATGATGACCAAATGGCGGCTGGATTCGTGCTGACCTGC
GTTGCCTACCCTGCATCAGACTGCACGATTCAAACCCACCAAGAAGATGCTCTACTTTAG

Upstream 100 bases:

>100_bases
AAGCCTTATGGGCCAGCTGAAATTTCTATCACAGCTCATAAGGCGCTCCCCTCTTGATCGTTGTCCACCTTACCTATCAA
ACTTACAAGGATTTCATTTA

Downstream 100 bases:

>100_bases
GTTTTGAAAAGATTATGAGTACCGTAGCTTACATACAAGACAACGAGTTTGAACAGTTGCTTAAGGATGAGTCCATCCTT
GTGATCGACTTTACAGCCAC

Product: 2Fe-2S type ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MATYNVRLINEAEGIDATIAVEDDQYIFDAAEENDLDLPVSCRSGACSSCAGKAISGEVDQSDQSFLDDDQMAAGFVLTC
VAYPASDCTIQTHQEDALL

Sequences:

>Translated_99_residues
MATYNVRLINEAEGIDATIAVEDDQYIFDAAEENDLDLPVSCRSGACSSCAGKAISGEVDQSDQSFLDDDQMAAGFVLTC
VAYPASDCTIQTHQEDALL
>Mature_98_residues
ATYNVRLINEAEGIDATIAVEDDQYIFDAAEENDLDLPVSCRSGACSSCAGKAISGEVDQSDQSFLDDDQMAAGFVLTCV
AYPASDCTIQTHQEDALL

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787658, Length=75, Percent_Identity=38.6666666666667, Blast_Score=59, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR010241
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 10559; Mature: 10427

Theoretical pI: Translated: 3.44; Mature: 3.44

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYNVRLINEAEGIDATIAVEDDQYIFDAAEENDLDLPVSCRSGACSSCAGKAISGEVD
CCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSDQSFLDDDQMAAGFVLTCVAYPASDCTIQTHQEDALL
CCCCCCCCCCCHHHCEEEEEEECCCCCCEEEECCCCCCC
>Mature Secondary Structure 
ATYNVRLINEAEGIDATIAVEDDQYIFDAAEENDLDLPVSCRSGACSSCAGKAISGEVD
CCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSDQSFLDDDQMAAGFVLTCVAYPASDCTIQTHQEDALL
CCCCCCCCCCCHHHCEEEEEEECCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 811255 [H]