| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338517
Identifier: 158338517
GI number: 158338517
Start: 5476654
End: 5477478
Strand: Reverse
Name: 158338517
Synonym: AM1_5419
Alternate gene names: NA
Gene position: 5477478-5476654 (Counterclockwise)
Preceding gene: 158338522
Following gene: 158338516
Centisome position: 84.22
GC content: 48.97
Gene sequence:
>825_bases ATGACGGTTCAGGATAAGCTGCAACAACTGCAAACCCTCTTTGCCCAAATGGAACGTGCGCTGATTGCTTATTCAGGAGG CATTGATAGCACTTTAGTGGCAAAAGTGGCATTTGATGTGCTGGGGTATAAAGCTTTAGCGATTACTGCTAATTCACCCT CCCTGCTGCCAGAAGATTTTGAAGATGCTCAAGTACAAGCGGCTGATATTGGTATTTCCCATGAAGTGGTTGCCACCCAT GAAATGGATAATCCCAATTACACGACGAATCCGGTGAATCGCTGCTATTTCTGCAAAAGTGAACTTTACGATGCCTTAAA GCCCCTAGCTTCAGAATGGGGCTATGCTTATGTTGTGGATGGGGTGAATGCAGATGATCTCCAGGATTATCGCCCAGGCA TTCGGGCGGCGAAGGAGCGCGGCACGAGATCACCCCTGGCAGAAGTGGGGATCACGAAGCTTGAAGTGCGAGAAATCTCA AAGTTGTTGGGGTTACCCTGGTGGGATAAACCGGCTCAGCCTTGTTTGAGTTCTCGTTTTCCTTATGGTGAAGAAATCAC GGTTGAGAAATTGCGACGGGTGGGACAGGCAGAGCGCTATCTTCGTCATTTGGGATGGTCGACGCTAAGGGTGCGATCTC AAGCCGATACCGCTCGCATCGAACTCCCGGCTGCGGAGATTCCAACTTTTATCCAAAACACCGATCTGGCTGAACTTGTA GAAGCCTTCAAGGGCTATGGCTTTACTTACGTCACTCTCGATTTAGAAGGCTTTGTTAGTGGCAAACTCAATCAGGAACT GCCCTTCGCATCGTCCATGTCTTGA
Upstream 100 bases:
>100_bases TATCATAATCACTCTTGGTTATCCCACCCATCTTTTATGAGTCAACCTTTTTCCCTGAGGACCATTAGACTGTAGGAATA GGAGTCATAACTAAGGGCTG
Downstream 100 bases:
>100_bases TCTGTTTCAATTCGCAAAAAACAGGTGTAAATATCCCTGATTTTCAGTGTTTTACACCTAACTTATTGCACCTAAAATTT ATTTCTTATACCTAAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTVQDKLQQLQTLFAQMERALIAYSGGIDSTLVAKVAFDVLGYKALAITANSPSLLPEDFEDAQVQAADIGISHEVVATH EMDNPNYTTNPVNRCYFCKSELYDALKPLASEWGYAYVVDGVNADDLQDYRPGIRAAKERGTRSPLAEVGITKLEVREIS KLLGLPWWDKPAQPCLSSRFPYGEEITVEKLRRVGQAERYLRHLGWSTLRVRSQADTARIELPAAEIPTFIQNTDLAELV EAFKGYGFTYVTLDLEGFVSGKLNQELPFASSMS
Sequences:
>Translated_274_residues MTVQDKLQQLQTLFAQMERALIAYSGGIDSTLVAKVAFDVLGYKALAITANSPSLLPEDFEDAQVQAADIGISHEVVATH EMDNPNYTTNPVNRCYFCKSELYDALKPLASEWGYAYVVDGVNADDLQDYRPGIRAAKERGTRSPLAEVGITKLEVREIS KLLGLPWWDKPAQPCLSSRFPYGEEITVEKLRRVGQAERYLRHLGWSTLRVRSQADTARIELPAAEIPTFIQNTDLAELV EAFKGYGFTYVTLDLEGFVSGKLNQELPFASSMS >Mature_273_residues TVQDKLQQLQTLFAQMERALIAYSGGIDSTLVAKVAFDVLGYKALAITANSPSLLPEDFEDAQVQAADIGISHEVVATHE MDNPNYTTNPVNRCYFCKSELYDALKPLASEWGYAYVVDGVNADDLQDYRPGIRAAKERGTRSPLAEVGITKLEVREISK LLGLPWWDKPAQPCLSSRFPYGEEITVEKLRRVGQAERYLRHLGWSTLRVRSQADTARIELPAAEIPTFIQNTDLAELVE AFKGYGFTYVTLDLEGFVSGKLNQELPFASSMS
Specific function: Unknown
COG id: COG1606
COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005232 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: NA
Molecular weight: Translated: 30505; Mature: 30374
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQDKLQQLQTLFAQMERALIAYSGGIDSTLVAKVAFDVLGYKALAITANSPSLLPEDF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCC EDAQVQAADIGISHEVVATHEMDNPNYTTNPVNRCYFCKSELYDALKPLASEWGYAYVVD CHHHEEHHHCCCCCEEEEEECCCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHCCEEEEEC GVNADDLQDYRPGIRAAKERGTRSPLAEVGITKLEVREISKLLGLPWWDKPAQPCLSSRF CCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCC PYGEEITVEKLRRVGQAERYLRHLGWSTLRVRSQADTARIELPAAEIPTFIQNTDLAELV CCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCEEEECCHHHCCHHHCCCCHHHHH EAFKGYGFTYVTLDLEGFVSGKLNQELPFASSMS HHHHCCCEEEEEEEECCHHCCCCCCCCCCCCCCC >Mature Secondary Structure TVQDKLQQLQTLFAQMERALIAYSGGIDSTLVAKVAFDVLGYKALAITANSPSLLPEDF CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCC EDAQVQAADIGISHEVVATHEMDNPNYTTNPVNRCYFCKSELYDALKPLASEWGYAYVVD CHHHEEHHHCCCCCEEEEEECCCCCCCCCCCCHHHEEHHHHHHHHHHHHHHHCCEEEEEC GVNADDLQDYRPGIRAAKERGTRSPLAEVGITKLEVREISKLLGLPWWDKPAQPCLSSRF CCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCC PYGEEITVEKLRRVGQAERYLRHLGWSTLRVRSQADTARIELPAAEIPTFIQNTDLAELV CCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCEEEECCHHHCCHHHCCCCHHHHH EAFKGYGFTYVTLDLEGFVSGKLNQELPFASSMS HHHHCCCEEEEEEEECCHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]