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The map label for this gene is infC [C]

Identifier: 158338503

GI number: 158338503

Start: 5464527

End: 5464841

Strand: Reverse

Name: infC [C]

Synonym: AM1_5405

Alternate gene names: 158338503

Gene position: 5464841-5464527 (Counterclockwise)

Preceding gene: 158338504

Following gene: 158338499

Centisome position: 84.03

GC content: 46.03

Gene sequence:

>315_bases
ATGGATTTTGGTAAGTATCGATACGAGCAGAAAAAAAAGCAGAAACAGTCTTCTTCCAAACCTTCCCTCAAAGAAGTCAA
ACTCCGCCCCAATGTAGGTGAGGCTGATTATGGGGTTCGCATTAGCAGGGCCTTGCAATGGTTAGAGAAAGGGGACAGTG
TTAAGTTCCAAGTCCGTTTGCGAGGCCGAGAGCATCAACATCGCGATCGCGCCACCGATTTACTGCAGAGAGTGATCGAT
GATTTAAGTAAGGTGGGTGAGGTTCAAATTTTTGATCGACGAGCGTTGATTGTCCAGCTTATACCGTCTTCATAA

Upstream 100 bases:

>100_bases
AGGCGTTGTTGATACGCAAGAAGCCCTTGCCCTTGCTCAGCAAGCCAAACTGGACTTAGTCATCGTCTCCGAGCGAGAGG
ATGCACCCGTTGCCAAGATC

Downstream 100 bases:

>100_bases
AGCTGATTCTTTGGGTGAGGGTATAACAGGATAATAAATAGAGTTCAGCGGGCAGAGTTCGATTTGTGAAGTGCAATGCT
CCGCCCGCTGCAGGTAGTAG

Product: translation initiation factor IF-3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MDFGKYRYEQKKKQKQSSSKPSLKEVKLRPNVGEADYGVRISRALQWLEKGDSVKFQVRLRGREHQHRDRATDLLQRVID
DLSKVGEVQIFDRRALIVQLIPSS

Sequences:

>Translated_104_residues
MDFGKYRYEQKKKQKQSSSKPSLKEVKLRPNVGEADYGVRISRALQWLEKGDSVKFQVRLRGREHQHRDRATDLLQRVID
DLSKVGEVQIFDRRALIVQLIPSS
>Mature_104_residues
MDFGKYRYEQKKKQKQSSSKPSLKEVKLRPNVGEADYGVRISRALQWLEKGDSVKFQVRLRGREHQHRDRATDLLQRVID
DLSKVGEVQIFDRRALIVQLIPSS

Specific function: IF-3 Binds To The 30s Ribosomal Subunit And Shifts The Equilibrum Between 70s Ribosomes And Their 50s And 30s Subunits In Favor Of The Free Subunits, Thus Enhancing The Availability Of 30s Subunits On Which Protein Synthesis Initiation Begins. IF-3 Is Als

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=109, Percent_Identity=37.6146788990826, Blast_Score=66, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019813
- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 12180; Mature: 12180

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFGKYRYEQKKKQKQSSSKPSLKEVKLRPNVGEADYGVRISRALQWLEKGDSVKFQVRL
CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEE
RGREHQHRDRATDLLQRVIDDLSKVGEVQIFDRRALIVQLIPSS
CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCC
>Mature Secondary Structure
MDFGKYRYEQKKKQKQSSSKPSLKEVKLRPNVGEADYGVRISRALQWLEKGDSVKFQVRL
CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEE
RGREHQHRDRATDLLQRVIDDLSKVGEVQIFDRRALIVQLIPSS
CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]