Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158338494

Identifier: 158338494

GI number: 158338494

Start: 5458172

End: 5458603

Strand: Reverse

Name: 158338494

Synonym: AM1_5396

Alternate gene names: NA

Gene position: 5458603-5458172 (Counterclockwise)

Preceding gene: 158338495

Following gene: 158338493

Centisome position: 83.93

GC content: 35.65

Gene sequence:

>432_bases
GTGGAAGCAGATATTGCATCATACTTCTTAGCAGATACAGGGATAGAAGTGAAATTCGTTGCTTGTCCAGAAGATGTTGA
GTATAAGGATGATAACGGTTTCTCTTGTGATCTTGAGACTGTTGATGGTAAGAAAATAAAAATTTCTGCTGTTGTAGATG
CTGATGCAGATCAGGTTAGTTGGGAAGTTAAAACTGGTTTGCTATCGTCTATTAAGCTGGAGCAAATAATTAAAGAAGAG
TTTAATTCTTCAGAGTCGATATCTGTTAAACCTGATTGCGGTTCAACAGATATCATTGCCTATCAAGGTGATCTTATTAA
ATGTACTGTTTTAAATTCTGAAAACCAAAAAGGTATCGTTCAACTGGTTGTTACTGATAATCATGGTGGAGTGAGATTGC
AGGATTTATCTAGTGTGAAATGGCAAACATAA

Upstream 100 bases:

>100_bases
GTTCTATAAAACACGAAAGAATTCAACTCTAAAAACATTTTTGTTTCTGAGTGTATTGAGCCTTTTGTCAGCTTGTAACT
CAACCGTGGATGCAGATGTA

Downstream 100 bases:

>100_bases
GCTCATGACTATAACTAAAAATAGTATCTAAAAATGAAATATGCTAGATATCATTTATATCTTAGGGACTGTTGGAGCCA
TCATAGCTGGGATAAGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MEADIASYFLADTGIEVKFVACPEDVEYKDDNGFSCDLETVDGKKIKISAVVDADADQVSWEVKTGLLSSIKLEQIIKEE
FNSSESISVKPDCGSTDIIAYQGDLIKCTVLNSENQKGIVQLVVTDNHGGVRLQDLSSVKWQT

Sequences:

>Translated_143_residues
MEADIASYFLADTGIEVKFVACPEDVEYKDDNGFSCDLETVDGKKIKISAVVDADADQVSWEVKTGLLSSIKLEQIIKEE
FNSSESISVKPDCGSTDIIAYQGDLIKCTVLNSENQKGIVQLVVTDNHGGVRLQDLSSVKWQT
>Mature_143_residues
MEADIASYFLADTGIEVKFVACPEDVEYKDDNGFSCDLETVDGKKIKISAVVDADADQVSWEVKTGLLSSIKLEQIIKEE
FNSSESISVKPDCGSTDIIAYQGDLIKCTVLNSENQKGIVQLVVTDNHGGVRLQDLSSVKWQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15638; Mature: 15638

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEADIASYFLADTGIEVKFVACPEDVEYKDDNGFSCDLETVDGKKIKISAVVDADADQVS
CCCCHHEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCEE
WEVKTGLLSSIKLEQIIKEEFNSSESISVKPDCGSTDIIAYQGDLIKCTVLNSENQKGIV
EEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCEEEEEEECCCCCCCEE
QLVVTDNHGGVRLQDLSSVKWQT
EEEEECCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MEADIASYFLADTGIEVKFVACPEDVEYKDDNGFSCDLETVDGKKIKISAVVDADADQVS
CCCCHHEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCEE
WEVKTGLLSSIKLEQIIKEEFNSSESISVKPDCGSTDIIAYQGDLIKCTVLNSENQKGIV
EEECCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCEEEEEEECCCCCCCEE
QLVVTDNHGGVRLQDLSSVKWQT
EEEEECCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA