| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338489
Identifier: 158338489
GI number: 158338489
Start: 5453070
End: 5453735
Strand: Reverse
Name: 158338489
Synonym: AM1_5391
Alternate gene names: NA
Gene position: 5453735-5453070 (Counterclockwise)
Preceding gene: 158338493
Following gene: 158338488
Centisome position: 83.86
GC content: 39.19
Gene sequence:
>666_bases ATGTCCCAGTCCCAATCTGAACTACCTTCTGGGTATGTCATTCGGCGTTGCCAAAAAACGGATGAGGATTACCTCAAACT TTTAATGATGCCAAAAAGTCCTTCTTCTATGCCTTCTTGGGTTTCCATAAATTTTTTGATAACCCTGTTTGAAATAAGAA GTGGGATCGTAATATTTTTATTTTTGCAAGTCCTTGTATTATGTATGGCAGTATTTTTTTACGGTTTACATATAGGATTG CTAGGCGCAACTATACATGTCGACAACGTTTCAATAATAATCTATCTAATATCTTGCTTCTTGATTGCTTTTATGGGAAC AGCAATAGTCATGGCACAAGGGGGGAGAGGTTGGATTAAGGACTATCCTTGGCGTTATTGGGTGATCGAACAGGAAGATC GTTTCTTGGGCTCAGCTTATTTTCAAAACTATGAAACTTTCTCAGTTATCAGAAGTTTACGCATATGCTCAAAGTGGAGA GGCAAAGGTCTTGGTACTGCAATCGTCAAAAAACTGATTCAGATAGGGAAGAAGCCTATCTACTTATCACCTGCTTTAGG GACTTCAAAATTCTATAGACGCATTGGGTCTCGGAGAGTTCGCTTTCAAAAATTACCTCCAAAAGCCCAAAGATTTCTGA TTCCTACCTACTGCATGGCCCACTAA
Upstream 100 bases:
>100_bases TTTTATTGGTGAAGAAAAGACTTGTTGAGAATCAAGAAGTTACTTTAGCGTGATGATATTTGAGGCCAATACTAAGTCTA TAAAGTGCAGTAGTAAATTA
Downstream 100 bases:
>100_bases TTGATGTTTGATTTGGATATTCTCTTTTAAAGTAGATTGTTTGATTGGAATGTATAAGAGCTATTAATGGCAAATCACTC ATCAAATCTGCCATTTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSQSQSELPSGYVIRRCQKTDEDYLKLLMMPKSPSSMPSWVSINFLITLFEIRSGIVIFLFLQVLVLCMAVFFYGLHIGL LGATIHVDNVSIIIYLISCFLIAFMGTAIVMAQGGRGWIKDYPWRYWVIEQEDRFLGSAYFQNYETFSVIRSLRICSKWR GKGLGTAIVKKLIQIGKKPIYLSPALGTSKFYRRIGSRRVRFQKLPPKAQRFLIPTYCMAH
Sequences:
>Translated_221_residues MSQSQSELPSGYVIRRCQKTDEDYLKLLMMPKSPSSMPSWVSINFLITLFEIRSGIVIFLFLQVLVLCMAVFFYGLHIGL LGATIHVDNVSIIIYLISCFLIAFMGTAIVMAQGGRGWIKDYPWRYWVIEQEDRFLGSAYFQNYETFSVIRSLRICSKWR GKGLGTAIVKKLIQIGKKPIYLSPALGTSKFYRRIGSRRVRFQKLPPKAQRFLIPTYCMAH >Mature_220_residues SQSQSELPSGYVIRRCQKTDEDYLKLLMMPKSPSSMPSWVSINFLITLFEIRSGIVIFLFLQVLVLCMAVFFYGLHIGLL GATIHVDNVSIIIYLISCFLIAFMGTAIVMAQGGRGWIKDYPWRYWVIEQEDRFLGSAYFQNYETFSVIRSLRICSKWRG KGLGTAIVKKLIQIGKKPIYLSPALGTSKFYRRIGSRRVRFQKLPPKAQRFLIPTYCMAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25430; Mature: 25298
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSQSELPSGYVIRRCQKTDEDYLKLLMMPKSPSSMPSWVSINFLITLFEIRSGIVIFL CCCCCHHCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH FLQVLVLCMAVFFYGLHIGLLGATIHVDNVSIIIYLISCFLIAFMGTAIVMAQGGRGWIK HHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC DYPWRYWVIEQEDRFLGSAYFQNYETFSVIRSLRICSKWRGKGLGTAIVKKLIQIGKKPI CCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCE YLSPALGTSKFYRRIGSRRVRFQKLPPKAQRFLIPTYCMAH EECCCCCHHHHHHHHHHHCCCHHCCCCHHHHEECCHHHHCC >Mature Secondary Structure SQSQSELPSGYVIRRCQKTDEDYLKLLMMPKSPSSMPSWVSINFLITLFEIRSGIVIFL CCCCHHCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH FLQVLVLCMAVFFYGLHIGLLGATIHVDNVSIIIYLISCFLIAFMGTAIVMAQGGRGWIK HHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC DYPWRYWVIEQEDRFLGSAYFQNYETFSVIRSLRICSKWRGKGLGTAIVKKLIQIGKKPI CCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCE YLSPALGTSKFYRRIGSRRVRFQKLPPKAQRFLIPTYCMAH EECCCCCHHHHHHHHHHHCCCHHCCCCHHHHEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA