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The map label for this gene is yebA [C]

Identifier: 158338472

GI number: 158338472

Start: 5432985

End: 5434220

Strand: Direct

Name: yebA [C]

Synonym: AM1_5374

Alternate gene names: 158338472

Gene position: 5432985-5434220 (Clockwise)

Preceding gene: 158338470

Following gene: 158338474

Centisome position: 83.54

GC content: 48.38

Gene sequence:

>1236_bases
ATGCCTCGGCGATCTTCTCTCCACGCTAGCTCCAGAACGAGAAATCTCTCAACAGCAAGAGATTTGACCAGAATAGTGGG
CGTAATCGTTGGTCTATGCCTAGCTGTATTTCTCTTCACCCTTAGCGAGTACCCAAGCTTCGCTCAAAATTCGTCGGATC
TGAATGATCTACAGGAACGTCGGATACAAGTTGAGGAACAGCGTTCCAAAGTCACCAAACAACGACAGCAAATTGAGAAT
CTTGAGGGGGCAGCAAAAAAACGATTAGGCGGGCTAGAGCGCAATATTCAGTTTACGGAAGGCCAAATCAAAGAGAACGA
AGCCAAACTCAAGCAGGCCAACGACAAGCTGCAGAAGATAGAAGCAGACTTGACCAAAGCTGAGACGGCCTATAAAAAGA
AGCAGGGCAATACCGTTGCTCGACTCCGAGTCTTACAACGACAACGAGATTCCAGTACCTGGGTGGCTCTCTTACAGAGT
AAATCCATAGAAGAACTGCTAGATCGCCGGTATCAACTGCAACTCGTTTATAAATCCGATCGCACGTCCCTACTGGCCCT
CAAAGATGAGAAAGAAAAGATTAACGACAAAAAGCTGTTAGCAGAGATCCAGAAAAACCAAATTTCCCTGTTATCAGAAC
AACTCCTCTATCAAAAAGCCAATTTCAAAGCTCAAGCCTCTGTTCAAAGTCAATTGGTCACCCGGTTAAAAAGCGATCGA
CGCGCTTTACAGGCAGCAGAACAGCAACTCTCCCGAGATGTTAACAATATTTCTCAGGTGATTGCCCAGCGCATCGCTGA
ACAACAAGTGGCTTTCCGCTCCAATGCACCTGGCTTTCAGCAAATTTTAGGGACGGGACAAATGGTCCGACCCGTGGTTG
GTCCCATTACGAGTAATTTTGGCTATCGCTCCCATCCCATTTTTGGAACGGGACGATTTCATGCGGGGACTGATTTTGGC
GCACCCACAGGCGCACCCATTTTTGCATCAGATAGCGGCACTGTGATTGTAGCGGAATGGTATGGCGGCTATGGAAATGC
TGTCATTATCGACCATGGCAATGGGTTAACGACCCTCTATGGACACTGTAGTGAACTCTATGTCACCGTCGGCCAGGGCG
TCCAACGGGGGCAAACCATTGCTGCAGTGGGTTCAACAGGTTTGTCTACTGGCCCTCACCTCCATTTTGAAGTTCGAGTA
CAAGGCGAACCCACGGAGCCGTTGGCCTACTTGTAA

Upstream 100 bases:

>100_bases
AGGCATTGCCAAGGGGCAATATCTTGAGCTGATGCCACCGATTACCCATATTGCAGTCGACGTCTGAGAGATCTTGCTAA
AACTCCTTCTCCTAAAACTA

Downstream 100 bases:

>100_bases
GCGCTATTCTGTAGAATTCAACCGCTGCTGCCATTCAGCATCAATGGCGTCTGCACGCTCATATTCCTGTTCTAGTAGGT
CTTTTTCAGTGGTGTAGGCC

Product: peptidase M23 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MPRRSSLHASSRTRNLSTARDLTRIVGVIVGLCLAVFLFTLSEYPSFAQNSSDLNDLQERRIQVEEQRSKVTKQRQQIEN
LEGAAKKRLGGLERNIQFTEGQIKENEAKLKQANDKLQKIEADLTKAETAYKKKQGNTVARLRVLQRQRDSSTWVALLQS
KSIEELLDRRYQLQLVYKSDRTSLLALKDEKEKINDKKLLAEIQKNQISLLSEQLLYQKANFKAQASVQSQLVTRLKSDR
RALQAAEQQLSRDVNNISQVIAQRIAEQQVAFRSNAPGFQQILGTGQMVRPVVGPITSNFGYRSHPIFGTGRFHAGTDFG
APTGAPIFASDSGTVIVAEWYGGYGNAVIIDHGNGLTTLYGHCSELYVTVGQGVQRGQTIAAVGSTGLSTGPHLHFEVRV
QGEPTEPLAYL

Sequences:

>Translated_411_residues
MPRRSSLHASSRTRNLSTARDLTRIVGVIVGLCLAVFLFTLSEYPSFAQNSSDLNDLQERRIQVEEQRSKVTKQRQQIEN
LEGAAKKRLGGLERNIQFTEGQIKENEAKLKQANDKLQKIEADLTKAETAYKKKQGNTVARLRVLQRQRDSSTWVALLQS
KSIEELLDRRYQLQLVYKSDRTSLLALKDEKEKINDKKLLAEIQKNQISLLSEQLLYQKANFKAQASVQSQLVTRLKSDR
RALQAAEQQLSRDVNNISQVIAQRIAEQQVAFRSNAPGFQQILGTGQMVRPVVGPITSNFGYRSHPIFGTGRFHAGTDFG
APTGAPIFASDSGTVIVAEWYGGYGNAVIIDHGNGLTTLYGHCSELYVTVGQGVQRGQTIAAVGSTGLSTGPHLHFEVRV
QGEPTEPLAYL
>Mature_410_residues
PRRSSLHASSRTRNLSTARDLTRIVGVIVGLCLAVFLFTLSEYPSFAQNSSDLNDLQERRIQVEEQRSKVTKQRQQIENL
EGAAKKRLGGLERNIQFTEGQIKENEAKLKQANDKLQKIEADLTKAETAYKKKQGNTVARLRVLQRQRDSSTWVALLQSK
SIEELLDRRYQLQLVYKSDRTSLLALKDEKEKINDKKLLAEIQKNQISLLSEQLLYQKANFKAQASVQSQLVTRLKSDRR
ALQAAEQQLSRDVNNISQVIAQRIAEQQVAFRSNAPGFQQILGTGQMVRPVVGPITSNFGYRSHPIFGTGRFHAGTDFGA
PTGAPIFASDSGTVIVAEWYGGYGNAVIIDHGNGLTTLYGHCSELYVTVGQGVQRGQTIAAVGSTGLSTGPHLHFEVRVQ
GEPTEPLAYL

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=114, Percent_Identity=43.859649122807, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87082297, Length=126, Percent_Identity=39.6825396825397, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI87082174, Length=97, Percent_Identity=40.2061855670103, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789099, Length=97, Percent_Identity=40.2061855670103, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 45678; Mature: 45547

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRSSLHASSRTRNLSTARDLTRIVGVIVGLCLAVFLFTLSEYPSFAQNSSDLNDLQER
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHH
RIQVEEQRSKVTKQRQQIENLEGAAKKRLGGLERNIQFTEGQIKENEAKLKQANDKLQKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEECCCCCHHHHHHHHHHHHHHHHH
EADLTKAETAYKKKQGNTVARLRVLQRQRDSSTWVALLQSKSIEELLDRRYQLQLVYKSD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCEEEEEEEECC
RTSLLALKDEKEKINDKKLLAEIQKNQISLLSEQLLYQKANFKAQASVQSQLVTRLKSDR
CCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RALQAAEQQLSRDVNNISQVIAQRIAEQQVAFRSNAPGFQQILGTGQMVRPVVGPITSNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCC
GYRSHPIFGTGRFHAGTDFGAPTGAPIFASDSGTVIVAEWYGGYGNAVIIDHGNGLTTLY
CCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCEEEEECCCCHHHHH
GHCSELYVTVGQGVQRGQTIAAVGSTGLSTGPHLHFEVRVQGEPTEPLAYL
HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
PRRSSLHASSRTRNLSTARDLTRIVGVIVGLCLAVFLFTLSEYPSFAQNSSDLNDLQER
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHH
RIQVEEQRSKVTKQRQQIENLEGAAKKRLGGLERNIQFTEGQIKENEAKLKQANDKLQKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEECCCCCHHHHHHHHHHHHHHHHH
EADLTKAETAYKKKQGNTVARLRVLQRQRDSSTWVALLQSKSIEELLDRRYQLQLVYKSD
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCEEEEEEEECC
RTSLLALKDEKEKINDKKLLAEIQKNQISLLSEQLLYQKANFKAQASVQSQLVTRLKSDR
CCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
RALQAAEQQLSRDVNNISQVIAQRIAEQQVAFRSNAPGFQQILGTGQMVRPVVGPITSNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCC
GYRSHPIFGTGRFHAGTDFGAPTGAPIFASDSGTVIVAEWYGGYGNAVIIDHGNGLTTLY
CCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCEEEEECCCCHHHHH
GHCSELYVTVGQGVQRGQTIAAVGSTGLSTGPHLHFEVRVQGEPTEPLAYL
HHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]