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The map label for this gene is ugpC [H]

Identifier: 158338467

GI number: 158338467

Start: 5428060

End: 5429418

Strand: Direct

Name: ugpC [H]

Synonym: AM1_5369

Alternate gene names: 158338467

Gene position: 5428060-5429418 (Clockwise)

Preceding gene: 158338465

Following gene: 158338468

Centisome position: 83.46

GC content: 48.86

Gene sequence:

>1359_bases
ATGGATACCGATGTTGTCGTGGCTCAGGTTATCTTTGAGGATGTCTACAAAAGTTTCCCGGCTCGTAAAGGTGATCGCAC
AGCCAATCCCACGTCCGTTGACCCCAGTTTAAGTTCAACAACCTCCACTCAGCCTAAATCTAAGGACGATACCAAAAGCG
ATACCGTTACCATATTGCGCCACATCAATTTTTCCGTTGAAGATGGGGAGTTTATGGTGCTGGTGGGTCCCTCAGGATGT
GGGAAAAGCACGCTCTTACGCCTGATTGCAGGATTAGAGGACTTAACCGGGGGCAGTATCAGGATTGGCGATCGCAAAAT
CAATCACCTCCCCCCAAAAGCACGAGACATCGCCATGGTGTTTCAAAGTTACGCCCTTTATCCCCACATGAGCGTCTATA
ACAATTTGGCCTTTGGTCTGCGTCGTACCCAATCTCAGCGAGACCCTAAACGGCATTCTATTTCTGCATCCCTGCGAAGA
AAACTGGAATCTGGCTTAGTATCCGCGACCCGAATATTACCCAAGCCCTTCAGATATCGCTCCAAGCGAGAAAAATTAAT
TGAACAGACCGTCCATCAAGTTGCCGAAATCTTACAAATTGAGACTTTACTGGACCGCCTGCCCAAGCAACTTTCCGGGG
GGCAAAAGCAACGAGTGGCCTTGGGACGAGCCATGGCTCGTGATCCCCAAGTTTTTTTGATGGATGAACCCCTATCTAAC
CTAGACGCCAAGCTACGGACTCAAACTCGGGCTCAGATCGTCAAACTCCAGCGACAACTCGGAACAACAACAGTCTATGT
TACCCATGACCAAACGGAAGCCATGACCATGGGGGATCGAATTGCCGTTATGAATGCTGGCCAAATTCAGCAAATTGCTA
GCCCTTTAGAACTCTATAACCAGCCGATTAACCGATTTGTAGCCCAGTTCATTGGTTCTCCCCCCATGAACTTTATCTCC
GTCCAGGTTCGATCGTCTCGAAGCTTACAACATCCACAATTCACCCTCACCCTACCAGAAGTGTGGGAAATGGTCCTCCA
GAATTATCAAGGCCAAACCCTAACCTTAGGGATCCGCCCAGAACATCTGGATCTAGCATCTCCCAATTCCAGCAATATTC
CCACCCAAGTCGAACTGGTTGAAGCTTTAGGCCATGAAACCTATCTGTCTTTACAGTTGACCCAGAACAGTCAAATGGCC
CATGCACCTGCCCCATTAATTGCCCGCATCAATCCTTATCAGCAAGTCAGCCTTGGCGAGCAGCTATGGTTCTCGGTTCA
ACTAGACAAGATTCACTTGTTTGATCAACAGACTGAAGCGGCAATCCGCCCCAGTCATTTACCAGCCCCAACCCATTAG

Upstream 100 bases:

>100_bases
AATAATGGATTTCCCTGAAGGAATCTTAACAAATACTTCTGGTTGACCGGTAAATTCCCTTGACTGATATCGAGCAGCAC
AATAGGCTGAGAGCGATGTA

Downstream 100 bases:

>100_bases
CTTTTTATCGTTTTCCATCTGTACTTTCTTTTACTCTGTGTTGTCGAATACGGAACTTGAGGCGGGGCTCAATTAAGTTA
CCTCCCAGCATCTTCGGGTT

Product: sugar ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MDTDVVVAQVIFEDVYKSFPARKGDRTANPTSVDPSLSSTTSTQPKSKDDTKSDTVTILRHINFSVEDGEFMVLVGPSGC
GKSTLLRLIAGLEDLTGGSIRIGDRKINHLPPKARDIAMVFQSYALYPHMSVYNNLAFGLRRTQSQRDPKRHSISASLRR
KLESGLVSATRILPKPFRYRSKREKLIEQTVHQVAEILQIETLLDRLPKQLSGGQKQRVALGRAMARDPQVFLMDEPLSN
LDAKLRTQTRAQIVKLQRQLGTTTVYVTHDQTEAMTMGDRIAVMNAGQIQQIASPLELYNQPINRFVAQFIGSPPMNFIS
VQVRSSRSLQHPQFTLTLPEVWEMVLQNYQGQTLTLGIRPEHLDLASPNSSNIPTQVELVEALGHETYLSLQLTQNSQMA
HAPAPLIARINPYQQVSLGEQLWFSVQLDKIHLFDQQTEAAIRPSHLPAPTH

Sequences:

>Translated_452_residues
MDTDVVVAQVIFEDVYKSFPARKGDRTANPTSVDPSLSSTTSTQPKSKDDTKSDTVTILRHINFSVEDGEFMVLVGPSGC
GKSTLLRLIAGLEDLTGGSIRIGDRKINHLPPKARDIAMVFQSYALYPHMSVYNNLAFGLRRTQSQRDPKRHSISASLRR
KLESGLVSATRILPKPFRYRSKREKLIEQTVHQVAEILQIETLLDRLPKQLSGGQKQRVALGRAMARDPQVFLMDEPLSN
LDAKLRTQTRAQIVKLQRQLGTTTVYVTHDQTEAMTMGDRIAVMNAGQIQQIASPLELYNQPINRFVAQFIGSPPMNFIS
VQVRSSRSLQHPQFTLTLPEVWEMVLQNYQGQTLTLGIRPEHLDLASPNSSNIPTQVELVEALGHETYLSLQLTQNSQMA
HAPAPLIARINPYQQVSLGEQLWFSVQLDKIHLFDQQTEAAIRPSHLPAPTH
>Mature_452_residues
MDTDVVVAQVIFEDVYKSFPARKGDRTANPTSVDPSLSSTTSTQPKSKDDTKSDTVTILRHINFSVEDGEFMVLVGPSGC
GKSTLLRLIAGLEDLTGGSIRIGDRKINHLPPKARDIAMVFQSYALYPHMSVYNNLAFGLRRTQSQRDPKRHSISASLRR
KLESGLVSATRILPKPFRYRSKREKLIEQTVHQVAEILQIETLLDRLPKQLSGGQKQRVALGRAMARDPQVFLMDEPLSN
LDAKLRTQTRAQIVKLQRQLGTTTVYVTHDQTEAMTMGDRIAVMNAGQIQQIASPLELYNQPINRFVAQFIGSPPMNFIS
VQVRSSRSLQHPQFTLTLPEVWEMVLQNYQGQTLTLGIRPEHLDLASPNSSNIPTQVELVEALGHETYLSLQLTQNSQMA
HAPAPLIARINPYQQVSLGEQLWFSVQLDKIHLFDQQTEAAIRPSHLPAPTH

Specific function: Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system [H]

COG id: COG3839

COG function: function code G; ABC-type sugar transport systems, ATPase components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27477115, Length=249, Percent_Identity=27.710843373494, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI21536378, Length=259, Percent_Identity=26.6409266409266, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI9665248, Length=238, Percent_Identity=26.890756302521, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI1790467, Length=393, Percent_Identity=43.0025445292621, Blast_Score=310, Evalue=1e-85,
Organism=Escherichia coli, GI87082267, Length=384, Percent_Identity=41.40625, Blast_Score=302, Evalue=3e-83,
Organism=Escherichia coli, GI1787370, Length=322, Percent_Identity=39.7515527950311, Blast_Score=222, Evalue=3e-59,
Organism=Escherichia coli, GI1787712, Length=361, Percent_Identity=36.01108033241, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI87081709, Length=256, Percent_Identity=42.1875, Blast_Score=205, Evalue=5e-54,
Organism=Escherichia coli, GI1788761, Length=385, Percent_Identity=33.7662337662338, Blast_Score=202, Evalue=4e-53,
Organism=Escherichia coli, GI87081791, Length=252, Percent_Identity=40.0793650793651, Blast_Score=197, Evalue=2e-51,
Organism=Escherichia coli, GI1789032, Length=258, Percent_Identity=33.7209302325581, Blast_Score=151, Evalue=7e-38,
Organism=Escherichia coli, GI1788450, Length=267, Percent_Identity=32.9588014981273, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1786563, Length=229, Percent_Identity=33.6244541484716, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1787029, Length=260, Percent_Identity=29.6153846153846, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1789672, Length=249, Percent_Identity=30.1204819277108, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1789891, Length=240, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1786253, Length=243, Percent_Identity=32.0987654320988, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1787758, Length=312, Percent_Identity=29.1666666666667, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787500, Length=270, Percent_Identity=27.037037037037, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787089, Length=251, Percent_Identity=32.6693227091633, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1786703, Length=245, Percent_Identity=31.8367346938775, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1788053, Length=216, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1789962, Length=265, Percent_Identity=27.9245283018868, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1788225, Length=265, Percent_Identity=30.5660377358491, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1786872, Length=233, Percent_Identity=30.0429184549356, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1786398, Length=267, Percent_Identity=27.7153558052434, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI145693107, Length=270, Percent_Identity=28.5185185185185, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786981, Length=248, Percent_Identity=29.0322580645161, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1786698, Length=238, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787547, Length=268, Percent_Identity=25.7462686567164, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789873, Length=217, Percent_Identity=30.8755760368664, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI48994883, Length=278, Percent_Identity=25.8992805755396, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1789864, Length=250, Percent_Identity=26.8, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI48995001, Length=249, Percent_Identity=29.3172690763052, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1787164, Length=82, Percent_Identity=48.780487804878, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788644, Length=264, Percent_Identity=26.5151515151515, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788506, Length=270, Percent_Identity=25.5555555555556, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1790525, Length=243, Percent_Identity=26.3374485596708, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789963, Length=251, Percent_Identity=27.0916334661355, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787112, Length=241, Percent_Identity=29.4605809128631, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI48994997, Length=229, Percent_Identity=27.9475982532751, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787548, Length=287, Percent_Identity=23.6933797909408, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787759, Length=271, Percent_Identity=24.7232472324723, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787182, Length=245, Percent_Identity=25.3061224489796, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=246, Percent_Identity=31.3008130081301, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI193211017, Length=246, Percent_Identity=31.3008130081301, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71996809, Length=246, Percent_Identity=30.8943089430894, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17558664, Length=253, Percent_Identity=27.6679841897233, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI193209708, Length=249, Percent_Identity=28.1124497991968, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6321720, Length=246, Percent_Identity=24.390243902439, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320296, Length=216, Percent_Identity=25.462962962963, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI85726357, Length=248, Percent_Identity=30.6451612903226, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI28574150, Length=261, Percent_Identity=25.2873563218391, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI116007328, Length=261, Percent_Identity=25.2873563218391, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24659289, Length=246, Percent_Identity=28.0487804878049, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24643674, Length=245, Percent_Identity=24.8979591836735, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221512771, Length=232, Percent_Identity=26.7241379310345, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR017922
- InterPro:   IPR008995
- InterPro:   IPR013611 [H]

Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]

EC number: =3.6.3.20 [H]

Molecular weight: Translated: 50623; Mature: 50623

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTDVVVAQVIFEDVYKSFPARKGDRTANPTSVDPSLSSTTSTQPKSKDDTKSDTVTILR
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
HINFSVEDGEFMVLVGPSGCGKSTLLRLIAGLEDLTGGSIRIGDRKINHLPPKARDIAMV
HHCCEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHH
FQSYALYPHMSVYNNLAFGLRRTQSQRDPKRHSISASLRRKLESGLVSATRILPKPFRYR
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
SKREKLIEQTVHQVAEILQIETLLDRLPKQLSGGQKQRVALGRAMARDPQVFLMDEPLSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCHHH
LDAKLRTQTRAQIVKLQRQLGTTTVYVTHDQTEAMTMGDRIAVMNAGQIQQIASPLELYN
HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHCCCEEEEECCCHHHHHHHHHHHHH
QPINRFVAQFIGSPPMNFISVQVRSSRSLQHPQFTLTLPEVWEMVLQNYQGQTLTLGIRP
HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEECCC
EHLDLASPNSSNIPTQVELVEALGHETYLSLQLTQNSQMAHAPAPLIARINPYQQVSLGE
CCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEECCCHHHHCCCC
QLWFSVQLDKIHLFDQQTEAAIRPSHLPAPTH
CEEEEEEEEEEEEECCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDTDVVVAQVIFEDVYKSFPARKGDRTANPTSVDPSLSSTTSTQPKSKDDTKSDTVTILR
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
HINFSVEDGEFMVLVGPSGCGKSTLLRLIAGLEDLTGGSIRIGDRKINHLPPKARDIAMV
HHCCEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHH
FQSYALYPHMSVYNNLAFGLRRTQSQRDPKRHSISASLRRKLESGLVSATRILPKPFRYR
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
SKREKLIEQTVHQVAEILQIETLLDRLPKQLSGGQKQRVALGRAMARDPQVFLMDEPLSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECCCHHH
LDAKLRTQTRAQIVKLQRQLGTTTVYVTHDQTEAMTMGDRIAVMNAGQIQQIASPLELYN
HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHCCCEEEEECCCHHHHHHHHHHHHH
QPINRFVAQFIGSPPMNFISVQVRSSRSLQHPQFTLTLPEVWEMVLQNYQGQTLTLGIRP
HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEECCC
EHLDLASPNSSNIPTQVELVEALGHETYLSLQLTQNSQMAHAPAPLIARINPYQQVSLGE
CCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEECCCHHHHCCCC
QLWFSVQLDKIHLFDQQTEAAIRPSHLPAPTH
CEEEEEEEEEEEEECCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA