| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338436
Identifier: 158338436
GI number: 158338436
Start: 5399026
End: 5399565
Strand: Direct
Name: 158338436
Synonym: AM1_5336
Alternate gene names: NA
Gene position: 5399026-5399565 (Clockwise)
Preceding gene: 158338434
Following gene: 158338437
Centisome position: 83.01
GC content: 50.74
Gene sequence:
>540_bases ATGATGACTTTCGCTCAATCCACTTCACCCAAATTACTGATGGGCCATACAGCCCCACTCTTAGTGGTTCAGACCTTAGA TCACGGGCTGTGGCGGTTGGCCGATCAAACCCCTGAGCACTATACGATGGTGGTTTTCTATCGCGGGCTCCATTGCCCAG TCTGTGAGCAATACCTGACGGAACTCGACCAAAAGTTGTCAGCCTTTGCCCAACTTGGCGTCCAGGTGATTGCCTTGAGT GGTGATGGCATAGATAAAACCCAGCAACTTAAAACTCAAGCCAACCTCCAACAGCTATCCCTCGGTTATGGCTTAACTCC CGAGCAGATGCGGGACTGGGGCCTATACCTGAGTCAAGGCCATTTTGAACAAGAACCCGCGCTGTTTAGCGAACCCGCCG TATTCCTGATTCAGCCAGATGGTCGGTTGTACTTCGCCAATATTGGCACCCATCCCTTCTCCCGTATCGATTTTGATTCT CTGTTGGCTGGCTTAGCCTACGTCATTCCCAATAACTATCCTTTACGAGGTACAGCGTAA
Upstream 100 bases:
>100_bases TTTCAATAATAAAAATAGTCTTGCTCTATAGATTAGCCTACTCCAGGATAGAAAGTGTGAATCGTAACTGCGATCGCACC CTCTACCCAGGACTATTCCT
Downstream 100 bases:
>100_bases AGCAATCTGTCCCTTCTCTATCTGCAAACGTTCAATCATCTTAAGGAGCGCATTATGAACTCTGCCCTTTTCTATCTGGC TGCCAGTGGCATGCTCTGTG
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: Thioredoxin Peroxidase; Redoxin Domain-Containing Protein; AhpC/TSA Family Protein; Antioxidant AhpC/TSA Family
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MMTFAQSTSPKLLMGHTAPLLVVQTLDHGLWRLADQTPEHYTMVVFYRGLHCPVCEQYLTELDQKLSAFAQLGVQVIALS GDGIDKTQQLKTQANLQQLSLGYGLTPEQMRDWGLYLSQGHFEQEPALFSEPAVFLIQPDGRLYFANIGTHPFSRIDFDS LLAGLAYVIPNNYPLRGTA
Sequences:
>Translated_179_residues MMTFAQSTSPKLLMGHTAPLLVVQTLDHGLWRLADQTPEHYTMVVFYRGLHCPVCEQYLTELDQKLSAFAQLGVQVIALS GDGIDKTQQLKTQANLQQLSLGYGLTPEQMRDWGLYLSQGHFEQEPALFSEPAVFLIQPDGRLYFANIGTHPFSRIDFDS LLAGLAYVIPNNYPLRGTA >Mature_179_residues MMTFAQSTSPKLLMGHTAPLLVVQTLDHGLWRLADQTPEHYTMVVFYRGLHCPVCEQYLTELDQKLSAFAQLGVQVIALS GDGIDKTQQLKTQANLQQLSLGYGLTPEQMRDWGLYLSQGHFEQEPALFSEPAVFLIQPDGRLYFANIGTHPFSRIDFDS LLAGLAYVIPNNYPLRGTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20016; Mature: 20016
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTFAQSTSPKLLMGHTAPLLVVQTLDHGLWRLADQTPEHYTMVVFYRGLHCPVCEQYLT CCCCCCCCCCCEEECCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHH ELDQKLSAFAQLGVQVIALSGDGIDKTQQLKTQANLQQLSLGYGLTPEQMRDWGLYLSQG HHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCC HFEQEPALFSEPAVFLIQPDGRLYFANIGTHPFSRIDFDSLLAGLAYVIPNNYPLRGTA CCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MMTFAQSTSPKLLMGHTAPLLVVQTLDHGLWRLADQTPEHYTMVVFYRGLHCPVCEQYLT CCCCCCCCCCCEEECCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHH ELDQKLSAFAQLGVQVIALSGDGIDKTQQLKTQANLQQLSLGYGLTPEQMRDWGLYLSQG HHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCC HFEQEPALFSEPAVFLIQPDGRLYFANIGTHPFSRIDFDSLLAGLAYVIPNNYPLRGTA CCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA