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The map label for this gene is 158338404

Identifier: 158338404

GI number: 158338404

Start: 5366508

End: 5367740

Strand: Reverse

Name: 158338404

Synonym: AM1_5303

Alternate gene names: NA

Gene position: 5367740-5366508 (Counterclockwise)

Preceding gene: 158338407

Following gene: 158338401

Centisome position: 82.53

GC content: 49.23

Gene sequence:

>1233_bases
ATGGCAAAGCGTTTTTGGTTGGGAATTGCAGCAGTACAAGTGCTGGCACTCGGGCTGCTCTATTTCACCTGGCCGCCAGT
TGTCCTGACCCTGCTTGTACCAGAGGATGAAGCGCAAGCGTGGAAACCCTTAATCCAAAAATTTGAGGCCAAACATCCCA
AAACCAAAATTAGTCTGATCACCACGAAGAACTTAGGTGGCTTTTTATCCAAGCAGCTCAAGGAAGGCTCCTGTTTGCCC
CAAGGGTCTCCCGACTTGGTGTATATCGATGTGATTTGGGTGCCTGAATTTGCGGTTCGAGGCTGTCTTCAAGATCTGTC
GGGGCGGTTTGATACAGAGATGCGATCTCAATTCACTCCCCAAGCCGTCAAGGATGGAGAATATTTCGGCAAGTCCTATC
GCATCCCCTTGCGTTCCGATATGGGCATGCTCTATTACCGCTCTGATTTACTCGCCCAGGCTGGCTACCAGAAACCGCCC
CAGACCTTTACGGACTTAATGAAAATCTCCCAAACCCTCAAACAAAAGCAGCTAGTGGAATGGGGCTTTCTCTGGCAAGG
CGATCAGTACGAAGGCAAAATTGCCACCTTTGTCGAAATACTGGCAGGACATGGGGGTTATTGGATTGATGAAGAAACGC
GCCAGGTTGGGCTTGATCAACCCGAGGCTATTCAGGCCGTTCAGTTTCTACGCAACACCTTAACCAGCAAAGTGTCTCCC
ACCAGCGTTCTTACCTATAGCGAAGCAGAATCCCTCGCTCAATTTAGGACCGGGAAAAGCATGTTTCTGCGACATTGGCC
CAGGGCAAAGTTGTTTCTGGCTAAAGACAAGATGGTTAAATCAGTGCCGATGCAACTACAGGTCCAGGGGCATTCAGGTG
GCCCTTGCAATGGCAGTTGGGGGTTAGGGATTGCCAAAAAAACACAGCATTCTGATCAAGCCTGGCGAGCCATTCGATTT
TTCACCAGTGAGAAATCCCAGCGCCAATTTACCCAAGCCACTCAATTTATTCCCAGTCATAAAGCCGTGCTCAAACAAGG
ATCCCCTGAGGTCCAGGAGGCGATCACCAAGGTCATTTATCGACCTCGCATTCCAGAATATGATCAAGCCTCAGAAATCT
TACAAACGGCTCTTAGTCAAGCTCTTAATCCTGACACCTCTGATCAGGCTGTCGAAGAAATCATGGAAAAAGCAACATCA
GAAACCGACCAGCTACTGAATCCCCCTTCATAG

Upstream 100 bases:

>100_bases
AGCGTCAACCAGACCAGGAGTGAGTCTAAATCATGAGATCCTGACTATAGGCTGAAATCCTATCTTTTCACCTGGTTTCC
ATCACTGAGCAGTACGGTTA

Downstream 100 bases:

>100_bases
TCTCAGGGATGGAAGATGATGCTGCACCTGTTGATTTGTCTCCTCAGCTGGTTGACTATTCTCATGGGCTTGCCACCACA
ACAGGCCACTAATGAGCAGG

Product: sugar ABC transporter periplasmic sugar-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MAKRFWLGIAAVQVLALGLLYFTWPPVVLTLLVPEDEAQAWKPLIQKFEAKHPKTKISLITTKNLGGFLSKQLKEGSCLP
QGSPDLVYIDVIWVPEFAVRGCLQDLSGRFDTEMRSQFTPQAVKDGEYFGKSYRIPLRSDMGMLYYRSDLLAQAGYQKPP
QTFTDLMKISQTLKQKQLVEWGFLWQGDQYEGKIATFVEILAGHGGYWIDEETRQVGLDQPEAIQAVQFLRNTLTSKVSP
TSVLTYSEAESLAQFRTGKSMFLRHWPRAKLFLAKDKMVKSVPMQLQVQGHSGGPCNGSWGLGIAKKTQHSDQAWRAIRF
FTSEKSQRQFTQATQFIPSHKAVLKQGSPEVQEAITKVIYRPRIPEYDQASEILQTALSQALNPDTSDQAVEEIMEKATS
ETDQLLNPPS

Sequences:

>Translated_410_residues
MAKRFWLGIAAVQVLALGLLYFTWPPVVLTLLVPEDEAQAWKPLIQKFEAKHPKTKISLITTKNLGGFLSKQLKEGSCLP
QGSPDLVYIDVIWVPEFAVRGCLQDLSGRFDTEMRSQFTPQAVKDGEYFGKSYRIPLRSDMGMLYYRSDLLAQAGYQKPP
QTFTDLMKISQTLKQKQLVEWGFLWQGDQYEGKIATFVEILAGHGGYWIDEETRQVGLDQPEAIQAVQFLRNTLTSKVSP
TSVLTYSEAESLAQFRTGKSMFLRHWPRAKLFLAKDKMVKSVPMQLQVQGHSGGPCNGSWGLGIAKKTQHSDQAWRAIRF
FTSEKSQRQFTQATQFIPSHKAVLKQGSPEVQEAITKVIYRPRIPEYDQASEILQTALSQALNPDTSDQAVEEIMEKATS
ETDQLLNPPS
>Mature_409_residues
AKRFWLGIAAVQVLALGLLYFTWPPVVLTLLVPEDEAQAWKPLIQKFEAKHPKTKISLITTKNLGGFLSKQLKEGSCLPQ
GSPDLVYIDVIWVPEFAVRGCLQDLSGRFDTEMRSQFTPQAVKDGEYFGKSYRIPLRSDMGMLYYRSDLLAQAGYQKPPQ
TFTDLMKISQTLKQKQLVEWGFLWQGDQYEGKIATFVEILAGHGGYWIDEETRQVGLDQPEAIQAVQFLRNTLTSKVSPT
SVLTYSEAESLAQFRTGKSMFLRHWPRAKLFLAKDKMVKSVPMQLQVQGHSGGPCNGSWGLGIAKKTQHSDQAWRAIRFF
TSEKSQRQFTQATQFIPSHKAVLKQGSPEVQEAITKVIYRPRIPEYDQASEILQTALSQALNPDTSDQAVEEIMEKATSE
TDQLLNPPS

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46256; Mature: 46124

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRFWLGIAAVQVLALGLLYFTWPPVVLTLLVPEDEAQAWKPLIQKFEAKHPKTKISLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEE
TTKNLGGFLSKQLKEGSCLPQGSPDLVYIDVIWVPEFAVRGCLQDLSGRFDTEMRSQFTP
EECCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCHHHHHCCCC
QAVKDGEYFGKSYRIPLRSDMGMLYYRSDLLAQAGYQKPPQTFTDLMKISQTLKQKQLVE
HHHCCHHHCCCEECCCHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
WGFLWQGDQYEGKIATFVEILAGHGGYWIDEETRQVGLDQPEAIQAVQFLRNTLTSKVSP
HCCEECCCCCCCHHHHHHHHHHCCCCCEECCHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
TSVLTYSEAESLAQFRTGKSMFLRHWPRAKLFLAKDKMVKSVPMQLQVQGHSGGPCNGSW
CCEEEHHHHHHHHHHHCCHHHHHHHCCCCEEEEHHHHHHHHCCCEEEEECCCCCCCCCCC
GLGIAKKTQHSDQAWRAIRFFTSEKSQRQFTQATQFIPSHKAVLKQGSPEVQEAITKVIY
CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH
RPRIPEYDQASEILQTALSQALNPDTSDQAVEEIMEKATSETDQLLNPPS
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHCCCCC
>Mature Secondary Structure 
AKRFWLGIAAVQVLALGLLYFTWPPVVLTLLVPEDEAQAWKPLIQKFEAKHPKTKISLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEE
TTKNLGGFLSKQLKEGSCLPQGSPDLVYIDVIWVPEFAVRGCLQDLSGRFDTEMRSQFTP
EECCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCHHHHHCCCC
QAVKDGEYFGKSYRIPLRSDMGMLYYRSDLLAQAGYQKPPQTFTDLMKISQTLKQKQLVE
HHHCCHHHCCCEECCCHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
WGFLWQGDQYEGKIATFVEILAGHGGYWIDEETRQVGLDQPEAIQAVQFLRNTLTSKVSP
HCCEECCCCCCCHHHHHHHHHHCCCCCEECCHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
TSVLTYSEAESLAQFRTGKSMFLRHWPRAKLFLAKDKMVKSVPMQLQVQGHSGGPCNGSW
CCEEEHHHHHHHHHHHCCHHHHHHHCCCCEEEEHHHHHHHHCCCEEEEECCCCCCCCCCC
GLGIAKKTQHSDQAWRAIRFFTSEKSQRQFTQATQFIPSHKAVLKQGSPEVQEAITKVIY
CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH
RPRIPEYDQASEILQTALSQALNPDTSDQAVEEIMEKATSETDQLLNPPS
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]