| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338399
Identifier: 158338399
GI number: 158338399
Start: 5362305
End: 5362766
Strand: Reverse
Name: 158338399
Synonym: AM1_5299
Alternate gene names: NA
Gene position: 5362766-5362305 (Counterclockwise)
Preceding gene: 158338400
Following gene: 158338396
Centisome position: 82.46
GC content: 48.92
Gene sequence:
>462_bases ATGCCTCTTCAGTTGGATCCAGTTCTAGAAAGAAAAGGGGACAATACACCACCTATCGGTATTGTTTATGATTCAGCACT CATCCCGACATCGGCAATTTTGGCTACGGGATTATCTCAAAGAAATGTTTCCCAGAAAACGCCTCCCTTTTCCAATTTCC CCTTCGGCCAATCGATTGCGGTGGCATCAAACTCGGAGCGTCGCCAACCCCGCTCGTCCAGTCAACCTTCTTCTGACTGG ATTTGGCTGATCGGCATTCTAGGCTTTAGTGGCTTTGTTCTTTGGCGATTTCTAACTAATCTGTCCAGTGGCAACCAAGG GAGTAGCAACAACTGGTTCGATTTTGAGAGCCACGACAGAAGCAGCGATTCTAGCAACCCTAGCGATTATGGGAACTATA GCGATAGTAGCGATTTCGGTGGTGGAAGCAGTGACGGTGGCGGCGGTGGTGGAGATTGGTAA
Upstream 100 bases:
>100_bases TATCCAGTATATCTCCTAAAAAGTTATGGGGATTGGAATTGGTGTTGTGATTGCAGCTGTGCCTTTATATACTTCAGCGT CAGTCCACCAGGGAGTTTCA
Downstream 100 bases:
>100_bases GTCGTCCTCCCTGTCAGCTCAATGTTCCCATTAGGGAGCAGAAGGGGATTGAGCCGTTTCCTGCCCACGCTTTTTCCTAG TTCAAAAACCACGTTTTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MPLQLDPVLERKGDNTPPIGIVYDSALIPTSAILATGLSQRNVSQKTPPFSNFPFGQSIAVASNSERRQPRSSSQPSSDW IWLIGILGFSGFVLWRFLTNLSSGNQGSSNNWFDFESHDRSSDSSNPSDYGNYSDSSDFGGGSSDGGGGGGDW
Sequences:
>Translated_153_residues MPLQLDPVLERKGDNTPPIGIVYDSALIPTSAILATGLSQRNVSQKTPPFSNFPFGQSIAVASNSERRQPRSSSQPSSDW IWLIGILGFSGFVLWRFLTNLSSGNQGSSNNWFDFESHDRSSDSSNPSDYGNYSDSSDFGGGSSDGGGGGGDW >Mature_152_residues PLQLDPVLERKGDNTPPIGIVYDSALIPTSAILATGLSQRNVSQKTPPFSNFPFGQSIAVASNSERRQPRSSSQPSSDWI WLIGILGFSGFVLWRFLTNLSSGNQGSSNNWFDFESHDRSSDSSNPSDYGNYSDSSDFGGGSSDGGGGGGDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16372; Mature: 16241
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLQLDPVLERKGDNTPPIGIVYDSALIPTSAILATGLSQRNVSQKTPPFSNFPFGQSIA CCCCCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE VASNSERRQPRSSSQPSSDWIWLIGILGFSGFVLWRFLTNLSSGNQGSSNNWFDFESHDR ECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC SSDSSNPSDYGNYSDSSDFGGGSSDGGGGGGDW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLQLDPVLERKGDNTPPIGIVYDSALIPTSAILATGLSQRNVSQKTPPFSNFPFGQSIA CCCCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE VASNSERRQPRSSSQPSSDWIWLIGILGFSGFVLWRFLTNLSSGNQGSSNNWFDFESHDR ECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC SSDSSNPSDYGNYSDSSDFGGGSSDGGGGGGDW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA