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The map label for this gene is yfgC [C]

Identifier: 158338357

GI number: 158338357

Start: 5321661

End: 5322785

Strand: Reverse

Name: yfgC [C]

Synonym: AM1_5253

Alternate gene names: 158338357

Gene position: 5322785-5321661 (Counterclockwise)

Preceding gene: 158338358

Following gene: 158338356

Centisome position: 81.84

GC content: 47.29

Gene sequence:

>1125_bases
TTGAATCCAGATCATACAGAAGCCTCGGAGTTTGTACGCTTATCGGAAGAGTATCAGGATCGGTTCCGGGCCCGTCTGCG
TACACAGATTACGAATAATACGATTGGTAGTTTTATCACAGGGGCTTTGGGGATTGCGATTACAGGGAGCCCGATACCTG
GTTTGTCCGCTTTGCAGACTTCTATTCTGTTGTTGAGGGGAGAGTCGGCAGTGGGAGATGCGATCGCAGATCGTGCCAAA
CGCCAACTCCCTCTGATTGAAAACCCAGAAGTTCAAGCCTATGTGGATCGAATTGCCCAAAAACTAACGCCAATAGCCGG
ACGGGAATTCAATTATCAGTTTTATGTCGTCAACAATGAGAAGCTCAATGCCTTCGCATTACCAGGAGGGAAAATCTTTA
TTAATGGCGGCGCCATCCTCAAAAGCAACTCGGAAGCTGAGTTAGCGGGATTAATTGCCCATGAACTGTCCCATGCAGTC
CTCTCCCATGGATTTCAAATTGCCACGGAGAGCGCTGAAGCTGGTGGACTGACTCGATTAATCCCTTATGTCGGTGGATT
ATTTACTAGCGTAGTAGTGGCTGACTATAGCCGGGAGATGGAACGACAGGCAGATGTTTTAGGAACTCGCTTGTTAGCAT
CTGCGAACTATGCAGCAGATGGTCTTCGCAATTTGATGGTGACCTTAAGTAAGGAAGATAAACCCTTTGTTGCCCCGTGG
TTCTCGACTCATCCGGGTAGTCTGGAGCGGGTTCAGTACCTCGAAACTTTAATTACGGATAATGGCTATAATCGCTATGC
CTATGAAGGTATTGAGGAGCATCAGCGGATTCAAGCGTTGGTGCGAGCCGAACTAAAAAAAGCCAAGGAGGAGGAACAAT
CAGCAGAATCTTCGGATCAATCTGAGAGTGATACCCCTCCAACCGATAGCGATACCAAAAACGATACCAACTCTGATACG
GAATCGAAATCCCCTGCTACTTCCCCACCAAAAGGGGTTCCATCAGTCGAAGAACCACAAACTAACCCTAAGGAGAATAC
ACCTAAGTCATCTGTAGAAGATCCAACCTCTGATCCGGTTTTAACAAATCAACCAGCAACGACTGAGCCATCAGAGCCAA
AATAA

Upstream 100 bases:

>100_bases
TTATCCCAATCAACCTGAGTTGCAAAAAGGACTCATGCAACAGCAAACTCGGGCTAAACAATGGCTAGAGGCTTCGATCA
CGGCCCGCCAGTTTTCGCTA

Downstream 100 bases:

>100_bases
AGAACCGACTTGAACTCACTTACATTGAAGTTGCAAACCTGCAGTAACCGAGGGGAAGTATGCCTGCTGTTGTTTTTATT
GTCCTTTTAGCAATTAGCAT

Product: M48 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MNPDHTEASEFVRLSEEYQDRFRARLRTQITNNTIGSFITGALGIAITGSPIPGLSALQTSILLLRGESAVGDAIADRAK
RQLPLIENPEVQAYVDRIAQKLTPIAGREFNYQFYVVNNEKLNAFALPGGKIFINGGAILKSNSEAELAGLIAHELSHAV
LSHGFQIATESAEAGGLTRLIPYVGGLFTSVVVADYSREMERQADVLGTRLLASANYAADGLRNLMVTLSKEDKPFVAPW
FSTHPGSLERVQYLETLITDNGYNRYAYEGIEEHQRIQALVRAELKKAKEEEQSAESSDQSESDTPPTDSDTKNDTNSDT
ESKSPATSPPKGVPSVEEPQTNPKENTPKSSVEDPTSDPVLTNQPATTEPSEPK

Sequences:

>Translated_374_residues
MNPDHTEASEFVRLSEEYQDRFRARLRTQITNNTIGSFITGALGIAITGSPIPGLSALQTSILLLRGESAVGDAIADRAK
RQLPLIENPEVQAYVDRIAQKLTPIAGREFNYQFYVVNNEKLNAFALPGGKIFINGGAILKSNSEAELAGLIAHELSHAV
LSHGFQIATESAEAGGLTRLIPYVGGLFTSVVVADYSREMERQADVLGTRLLASANYAADGLRNLMVTLSKEDKPFVAPW
FSTHPGSLERVQYLETLITDNGYNRYAYEGIEEHQRIQALVRAELKKAKEEEQSAESSDQSESDTPPTDSDTKNDTNSDT
ESKSPATSPPKGVPSVEEPQTNPKENTPKSSVEDPTSDPVLTNQPATTEPSEPK
>Mature_374_residues
MNPDHTEASEFVRLSEEYQDRFRARLRTQITNNTIGSFITGALGIAITGSPIPGLSALQTSILLLRGESAVGDAIADRAK
RQLPLIENPEVQAYVDRIAQKLTPIAGREFNYQFYVVNNEKLNAFALPGGKIFINGGAILKSNSEAELAGLIAHELSHAV
LSHGFQIATESAEAGGLTRLIPYVGGLFTSVVVADYSREMERQADVLGTRLLASANYAADGLRNLMVTLSKEDKPFVAPW
FSTHPGSLERVQYLETLITDNGYNRYAYEGIEEHQRIQALVRAELKKAKEEEQSAESSDQSESDTPPTDSDTKNDTNSDT
ESKSPATSPPKGVPSVEEPQTNPKENTPKSSVEDPTSDPVLTNQPATTEPSEPK

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=181, Percent_Identity=28.7292817679558, Blast_Score=79, Evalue=5e-15,
Organism=Escherichia coli, GI1788840, Length=176, Percent_Identity=26.1363636363636, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87082185, Length=184, Percent_Identity=27.7173913043478, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 40703; Mature: 40703

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPDHTEASEFVRLSEEYQDRFRARLRTQITNNTIGSFITGALGIAITGSPIPGLSALQT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHH
SILLLRGESAVGDAIADRAKRQLPLIENPEVQAYVDRIAQKLTPIAGREFNYQFYVVNNE
HHHEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
KLNAFALPGGKIFINGGAILKSNSEAELAGLIAHELSHAVLSHGFQIATESAEAGGLTRL
CCEEEECCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHH
IPYVGGLFTSVVVADYSREMERQADVLGTRLLASANYAADGLRNLMVTLSKEDKPFVAPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEECCC
FSTHPGSLERVQYLETLITDNGYNRYAYEGIEEHQRIQALVRAELKKAKEEEQSAESSDQ
CCCCCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SESDTPPTDSDTKNDTNSDTESKSPATSPPKGVPSVEEPQTNPKENTPKSSVEDPTSDPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
LTNQPATTEPSEPK
ECCCCCCCCCCCCC
>Mature Secondary Structure
MNPDHTEASEFVRLSEEYQDRFRARLRTQITNNTIGSFITGALGIAITGSPIPGLSALQT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHH
SILLLRGESAVGDAIADRAKRQLPLIENPEVQAYVDRIAQKLTPIAGREFNYQFYVVNNE
HHHEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
KLNAFALPGGKIFINGGAILKSNSEAELAGLIAHELSHAVLSHGFQIATESAEAGGLTRL
CCEEEECCCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHH
IPYVGGLFTSVVVADYSREMERQADVLGTRLLASANYAADGLRNLMVTLSKEDKPFVAPW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEECCC
FSTHPGSLERVQYLETLITDNGYNRYAYEGIEEHQRIQALVRAELKKAKEEEQSAESSDQ
CCCCCCHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SESDTPPTDSDTKNDTNSDTESKSPATSPPKGVPSVEEPQTNPKENTPKSSVEDPTSDPV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
LTNQPATTEPSEPK
ECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]