Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158338356

Identifier: 158338356

GI number: 158338356

Start: 5321443

End: 5321601

Strand: Reverse

Name: 158338356

Synonym: AM1_5252

Alternate gene names: NA

Gene position: 5321601-5321443 (Counterclockwise)

Preceding gene: 158338357

Following gene: 158338353

Centisome position: 81.82

GC content: 43.4

Gene sequence:

>159_bases
ATGCCTGCTGTTGTTTTTATTGTCCTTTTAGCAATTAGCATTCAAATCACCAAAATGATGCTGTTTTGGCCCATTGATGC
CTTTCACGCTCTGAGCATTCCCAAGCTGTTAACGGCGGGTCTAGTTCTTGGTCTTTTTGCCTGGCTGTTTGGAGAATAG

Upstream 100 bases:

>100_bases
CAAATCAACCAGCAACGACTGAGCCATCAGAGCCAAAATAAAGAACCGACTTGAACTCACTTACATTGAAGTTGCAAACC
TGCAGTAACCGAGGGGAAGT

Downstream 100 bases:

>100_bases
CTAAAAACTTAACCTCCCCCGCAGCCCCCACAACCGCCTCCACAACCGCCTCCACAGCCTCCCCCACATCCACTACCACA
CCCTCCCCCACAGTTGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 51

Protein sequence:

>52_residues
MPAVVFIVLLAISIQITKMMLFWPIDAFHALSIPKLLTAGLVLGLFAWLFGE

Sequences:

>Translated_52_residues
MPAVVFIVLLAISIQITKMMLFWPIDAFHALSIPKLLTAGLVLGLFAWLFGE
>Mature_51_residues
PAVVFIVLLAISIQITKMMLFWPIDAFHALSIPKLLTAGLVLGLFAWLFGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5758; Mature: 5627

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVVFIVLLAISIQITKMMLFWPIDAFHALSIPKLLTAGLVLGLFAWLFGE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PAVVFIVLLAISIQITKMMLFWPIDAFHALSIPKLLTAGLVLGLFAWLFGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA