| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158338345
Identifier: 158338345
GI number: 158338345
Start: 5308216
End: 5308632
Strand: Direct
Name: 158338345
Synonym: AM1_5241
Alternate gene names: NA
Gene position: 5308216-5308632 (Clockwise)
Preceding gene: 158338344
Following gene: 158338346
Centisome position: 81.62
GC content: 48.44
Gene sequence:
>417_bases TTGGGAATTGCAGCGTTGGCCTATCTAAGTACGGTATCCGACTACCCTCTGATTGCGGCTCCCTTTGGTGCCGCTGCAGT GCTCGTATTTGCGGTGCCGAATAGCCCCCTAGCTCAACCCCGAAATTTAATTTTTGGCAATTTATTAGGGGCAATTGTCA GTGTGGTGATGGTTTATCTGTTTGGTTCTGAACCCTGGGTAATGGCGTTATCCGTTGCGACAGCCATTAAAGTGATGCAG CTAACCAAAACCCTCCACCCTCCTGGAGGCGCTGTGGCTCTAGTGGGGGTCATGAGTCAAGCAACCTGGAATTTTGTACT CACACCTGTTGTCGCCGGATCAATTGTTTTACTCTTCTGCACGTTTGCGTTTAATAATCTAATGCCAGAACGGTCTTATC CTCGTCACTGGTTATAA
Upstream 100 bases:
>100_bases GTTGAAATTCAAGAAATTCATATCAAGTATCCACGGTAGTTCAAAGGTTCAACCACGTTTTTCTCTAAGCCAAATTCTGT TTACGTATATCGGGAGTTTC
Downstream 100 bases:
>100_bases AGCCTTTAGTGTTGAACATTATTTAGATCTCGGATAGGTATCGATTGGCACATCAATTAAGAAGAATAAGAAAAAGGGTT CGTGTTGATATTTTAGGGGT
Product: HPP family protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; CBS Domain Containing Membrane Protein; HPP Family Protein+B; CBS-Domain-Containing Membrane Protein; HPP Domain-Containing Protein; HPP Family Membrane Protein; Cbs Domain Containing Membrane Protein; HPP Family/CBS Domain-Containing Protein; Transmembrane Protein; CBS Domain-Containing Membrane Protein; CbsHpp; CBS Domain Pair Family; Signal Transduction Protein; Conserved Protein; HPP Family; HPP Domain Protein
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MGIAALAYLSTVSDYPLIAAPFGAAAVLVFAVPNSPLAQPRNLIFGNLLGAIVSVVMVYLFGSEPWVMALSVATAIKVMQ LTKTLHPPGGAVALVGVMSQATWNFVLTPVVAGSIVLLFCTFAFNNLMPERSYPRHWL
Sequences:
>Translated_138_residues MGIAALAYLSTVSDYPLIAAPFGAAAVLVFAVPNSPLAQPRNLIFGNLLGAIVSVVMVYLFGSEPWVMALSVATAIKVMQ LTKTLHPPGGAVALVGVMSQATWNFVLTPVVAGSIVLLFCTFAFNNLMPERSYPRHWL >Mature_137_residues GIAALAYLSTVSDYPLIAAPFGAAAVLVFAVPNSPLAQPRNLIFGNLLGAIVSVVMVYLFGSEPWVMALSVATAIKVMQL TKTLHPPGGAVALVGVMSQATWNFVLTPVVAGSIVLLFCTFAFNNLMPERSYPRHWL
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14663; Mature: 14531
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIAALAYLSTVSDYPLIAAPFGAAAVLVFAVPNSPLAQPRNLIFGNLLGAIVSVVMVYL CCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH FGSEPWVMALSVATAIKVMQLTKTLHPPGGAVALVGVMSQATWNFVLTPVVAGSIVLLFC HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFAFNNLMPERSYPRHWL HHHHHHCCCCCCCCCCCC >Mature Secondary Structure GIAALAYLSTVSDYPLIAAPFGAAAVLVFAVPNSPLAQPRNLIFGNLLGAIVSVVMVYL CHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH FGSEPWVMALSVATAIKVMQLTKTLHPPGGAVALVGVMSQATWNFVLTPVVAGSIVLLFC HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFAFNNLMPERSYPRHWL HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA