| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338276
Identifier: 158338276
GI number: 158338276
Start: 5235634
End: 5237655
Strand: Direct
Name: 158338276
Synonym: AM1_5172
Alternate gene names: NA
Gene position: 5235634-5237655 (Clockwise)
Preceding gene: 158338274
Following gene: 158338277
Centisome position: 80.5
GC content: 51.68
Gene sequence:
>2022_bases ATGACGGTTCCCGCCACTAACTTTGATGACATTCTGGTCATTATCCCTGTTTTAAACGAGGAAGAAACGGTTGGAACCGT TATTCATTCCTTACAGGATCTTGGACTACAGCAAATTCGAGTCGTTGATAATGGTAGTTGCGATCGCACTGCCGAAACCG CCCTCAATGCAGGTGCAGACGTTCTCTCTGAACCTATTCCTGGCTATGGTCGCGCCTGTTGGCAGGGAATGCAGAATATC CCCGAACATATCCACTGGATTTTGTTTTGTGATGGCGATGGCAGCGATGATCTATCCGTATTGCCAAAGTTTTTTGCTCA ACGCCAAGATTTCGACTTAATTTTAGGCAATCGCCGCGTCCGGCCAGAAAGTCGGGCCGCCATGACCCCTGTTCAGAACT GGGGAAATGGATTAGCCACAACCCTGATCCGCTGGGGCTGGGGACATCCCTTTCAAGACTTAGGTCCTCTTAGGCTGATT CGCCGCTCTCGCCTTGAACAGCTCAATATGCAAGATCGTGGCTTTGGCTGGACGGTGGAAATGCAGGCTAAGGCCGCCGA ACATAAATTGCGGACCTGCGAGATTCCCCAAGGCTACCGCCCTCGCCAGGGGGGACGCTCCAAAATTAGCGGCACGATTA AGGGAAGTATCCAGGCTGGCAGCATTATTTTGAGCACCCTGGCGGTCCTCTACGGGCAGCATTTACAACTGCTCTACGCA AAATCTCCTCTGCGGAAATACTCTGTATGGCTAAGCGCCATTCTGCTGATGGCAGGCTGCGCCATGATCGTTCCTTATGG TGATTTTACCCAGCCAGGAATGGTACCGCCGTTTTGGCGAGGGGTAAGCGTGATGGGATTGGGGTTTGTTATGTCTTGGA CATTGCCCCAAGTGTCAAAGGTGTGGTTTTGGATGGTTGCGATCGCAACCCGATGCATCCTCTTAGCCATGGCTCCTGGC AATGATATATGGCGCTATCTCTGGGAAGGACGATTGCAAAACTTGGGCATTAGTCCCTTTGAACTTGCCCCCACTGCTCC TGAACTCACGCCATTACGCACAGCATGGTGGTCAATGATCAATAATGCGGATGTCTCTGCCATTTACCCACCCATTACTC AGCTAGGCTTTCGAGGACTGGCTGCAATTGCCACCTCCATATTGCTCTTCAAGCTTGCGTTTGTAGCAGCAGACTTAGGG GTTTGTTGGTTGCTGCAGCGGCGCTTCGGCCGCCTAAGAGCCCTGATCTATGCCTGGAACCCACTGATCCTTTACTCCTT TGCAGGCGGAGCCCATTACGATAGCTGGTTTATTTTGCCCCTAGTCTGGGCTTGGCTCTGTTTGGACACTCAACCCCGTC GGGCTGCTATCACCCTTGCCGGATTAGGGTTGCTGGGGGTCAGTATTGCCACCAAATGGATTTCTCTACCTATCATTGGG TTTGTAGGTTGGATCTTTGTGAGAAAGCGAGAGTGGACGTGGGCGAGCATCTCCGTTCTGGTGCCAGTCATGCCTATGCT GATCAGTGCCTTACCATTCTGTTCTCTGACCAGTTGCCCCCTCATTCCCACCAGTTCCTCCTTTGTCACCAAAGGCCGTA GTGCCGAGTTTTTACCCATTGGCACATTGTTATCGGCCCCCGAATGGCACAATGCGGTTTTGTTGATACCCCTTGCGATC GCACTCCTCTTTCTCCTTTGGCGCTCCACCCAGGTCGGTGACTTTACCGAAAGCTATCTAGGAATCTTGCTTTTACTCTC GCCAGTGGTTCATGCCTGGTACTTTACTTGGCTGGTCCCTTTTGCAGTCGCGAGTAGAAACTGGGGAACCCGTCTGGTCA GTCTCTCAGCCTTTGTTTATTTTGCCCTTCCCCACCGCGAAAGCTTGGGGGCAGGTAATTGGTTATTGACCTCTAGTGAG CGCATTTGGCTATGGACTCCCTTTGTTTTGGGATGGCTGTGGACTTGGTATTTTCGACGTTCCCAATCACTTTTTAAGAC CAGCCCAGGGACATCTCAGTAA
Upstream 100 bases:
>100_bases TCTCATTCAACTCTCAGGGAACACTCAGCTAAGTCAGGTCTTCAATTTAAGCTTAATAAGGTTGACTAGCTGTATAACGT GCTGTAATCACTCCTTCTGA
Downstream 100 bases:
>100_bases ATTCTCAGTTCCATCGGGCTACATAGAAGCATATAGTTTTTTCTGAGATGCCTGGAGATAAATAGATATGAAGAAGATCA AACCCTTTTCTATTTTGTTG
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 673; Mature: 672
Protein sequence:
>673_residues MTVPATNFDDILVIIPVLNEEETVGTVIHSLQDLGLQQIRVVDNGSCDRTAETALNAGADVLSEPIPGYGRACWQGMQNI PEHIHWILFCDGDGSDDLSVLPKFFAQRQDFDLILGNRRVRPESRAAMTPVQNWGNGLATTLIRWGWGHPFQDLGPLRLI RRSRLEQLNMQDRGFGWTVEMQAKAAEHKLRTCEIPQGYRPRQGGRSKISGTIKGSIQAGSIILSTLAVLYGQHLQLLYA KSPLRKYSVWLSAILLMAGCAMIVPYGDFTQPGMVPPFWRGVSVMGLGFVMSWTLPQVSKVWFWMVAIATRCILLAMAPG NDIWRYLWEGRLQNLGISPFELAPTAPELTPLRTAWWSMINNADVSAIYPPITQLGFRGLAAIATSILLFKLAFVAADLG VCWLLQRRFGRLRALIYAWNPLILYSFAGGAHYDSWFILPLVWAWLCLDTQPRRAAITLAGLGLLGVSIATKWISLPIIG FVGWIFVRKREWTWASISVLVPVMPMLISALPFCSLTSCPLIPTSSSFVTKGRSAEFLPIGTLLSAPEWHNAVLLIPLAI ALLFLLWRSTQVGDFTESYLGILLLLSPVVHAWYFTWLVPFAVASRNWGTRLVSLSAFVYFALPHRESLGAGNWLLTSSE RIWLWTPFVLGWLWTWYFRRSQSLFKTSPGTSQ
Sequences:
>Translated_673_residues MTVPATNFDDILVIIPVLNEEETVGTVIHSLQDLGLQQIRVVDNGSCDRTAETALNAGADVLSEPIPGYGRACWQGMQNI PEHIHWILFCDGDGSDDLSVLPKFFAQRQDFDLILGNRRVRPESRAAMTPVQNWGNGLATTLIRWGWGHPFQDLGPLRLI RRSRLEQLNMQDRGFGWTVEMQAKAAEHKLRTCEIPQGYRPRQGGRSKISGTIKGSIQAGSIILSTLAVLYGQHLQLLYA KSPLRKYSVWLSAILLMAGCAMIVPYGDFTQPGMVPPFWRGVSVMGLGFVMSWTLPQVSKVWFWMVAIATRCILLAMAPG NDIWRYLWEGRLQNLGISPFELAPTAPELTPLRTAWWSMINNADVSAIYPPITQLGFRGLAAIATSILLFKLAFVAADLG VCWLLQRRFGRLRALIYAWNPLILYSFAGGAHYDSWFILPLVWAWLCLDTQPRRAAITLAGLGLLGVSIATKWISLPIIG FVGWIFVRKREWTWASISVLVPVMPMLISALPFCSLTSCPLIPTSSSFVTKGRSAEFLPIGTLLSAPEWHNAVLLIPLAI ALLFLLWRSTQVGDFTESYLGILLLLSPVVHAWYFTWLVPFAVASRNWGTRLVSLSAFVYFALPHRESLGAGNWLLTSSE RIWLWTPFVLGWLWTWYFRRSQSLFKTSPGTSQ >Mature_672_residues TVPATNFDDILVIIPVLNEEETVGTVIHSLQDLGLQQIRVVDNGSCDRTAETALNAGADVLSEPIPGYGRACWQGMQNIP EHIHWILFCDGDGSDDLSVLPKFFAQRQDFDLILGNRRVRPESRAAMTPVQNWGNGLATTLIRWGWGHPFQDLGPLRLIR RSRLEQLNMQDRGFGWTVEMQAKAAEHKLRTCEIPQGYRPRQGGRSKISGTIKGSIQAGSIILSTLAVLYGQHLQLLYAK SPLRKYSVWLSAILLMAGCAMIVPYGDFTQPGMVPPFWRGVSVMGLGFVMSWTLPQVSKVWFWMVAIATRCILLAMAPGN DIWRYLWEGRLQNLGISPFELAPTAPELTPLRTAWWSMINNADVSAIYPPITQLGFRGLAAIATSILLFKLAFVAADLGV CWLLQRRFGRLRALIYAWNPLILYSFAGGAHYDSWFILPLVWAWLCLDTQPRRAAITLAGLGLLGVSIATKWISLPIIGF VGWIFVRKREWTWASISVLVPVMPMLISALPFCSLTSCPLIPTSSSFVTKGRSAEFLPIGTLLSAPEWHNAVLLIPLAIA LLFLLWRSTQVGDFTESYLGILLLLSPVVHAWYFTWLVPFAVASRNWGTRLVSLSAFVYFALPHRESLGAGNWLLTSSER IWLWTPFVLGWLWTWYFRRSQSLFKTSPGTSQ
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 75376; Mature: 75245
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPATNFDDILVIIPVLNEEETVGTVIHSLQDLGLQQIRVVDNGSCDRTAETALNAGAD CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHCCHH VLSEPIPGYGRACWQGMQNIPEHIHWILFCDGDGSDDLSVLPKFFAQRQDFDLILGNRRV HHCCCCCCCHHHHHHHHHHCHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCC RPESRAAMTPVQNWGNGLATTLIRWGWGHPFQDLGPLRLIRRSRLEQLNMQDRGFGWTVE CCCHHHHCCCHHHHCCHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCEEEE MQAKAAEHKLRTCEIPQGYRPRQGGRSKISGTIKGSIQAGSIILSTLAVLYGQHLQLLYA EEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH KSPLRKYSVWLSAILLMAGCAMIVPYGDFTQPGMVPPFWRGVSVMGLGFVMSWTLPQVSK HCHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCHHHHH VWFWMVAIATRCILLAMAPGNDIWRYLWEGRLQNLGISPFELAPTAPELTPLRTAWWSMI HHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH NNADVSAIYPPITQLGFRGLAAIATSILLFKLAFVAADLGVCWLLQRRFGRLRALIYAWN CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLILYSFAGGAHYDSWFILPLVWAWLCLDTQPRRAAITLAGLGLLGVSIATKWISLPIIG CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH FVGWIFVRKREWTWASISVLVPVMPMLISALPFCSLTSCPLIPTSSSFVTKGRSAEFLPI HHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEE GTLLSAPEWHNAVLLIPLAIALLFLLWRSTQVGDFTESYLGILLLLSPVVHAWYFTWLVP HHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FAVASRNWGTRLVSLSAFVYFALPHRESLGAGNWLLTSSERIWLWTPFVLGWLWTWYFRR HHHHCCCCCHHHHHEEEEEEEEECCCCCCCCCCEEEECCCEEEEECHHHHHHHHHHHHHH SQSLFKTSPGTSQ CCHHHCCCCCCCC >Mature Secondary Structure TVPATNFDDILVIIPVLNEEETVGTVIHSLQDLGLQQIRVVDNGSCDRTAETALNAGAD CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHHHHCCHH VLSEPIPGYGRACWQGMQNIPEHIHWILFCDGDGSDDLSVLPKFFAQRQDFDLILGNRRV HHCCCCCCCHHHHHHHHHHCHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCC RPESRAAMTPVQNWGNGLATTLIRWGWGHPFQDLGPLRLIRRSRLEQLNMQDRGFGWTVE CCCHHHHCCCHHHHCCHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCEEEE MQAKAAEHKLRTCEIPQGYRPRQGGRSKISGTIKGSIQAGSIILSTLAVLYGQHLQLLYA EEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH KSPLRKYSVWLSAILLMAGCAMIVPYGDFTQPGMVPPFWRGVSVMGLGFVMSWTLPQVSK HCHHHHHHHHHHHHHHHHCHHEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCHHHHH VWFWMVAIATRCILLAMAPGNDIWRYLWEGRLQNLGISPFELAPTAPELTPLRTAWWSMI HHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH NNADVSAIYPPITQLGFRGLAAIATSILLFKLAFVAADLGVCWLLQRRFGRLRALIYAWN CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PLILYSFAGGAHYDSWFILPLVWAWLCLDTQPRRAAITLAGLGLLGVSIATKWISLPIIG CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH FVGWIFVRKREWTWASISVLVPVMPMLISALPFCSLTSCPLIPTSSSFVTKGRSAEFLPI HHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEE GTLLSAPEWHNAVLLIPLAIALLFLLWRSTQVGDFTESYLGILLLLSPVVHAWYFTWLVP HHHHCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FAVASRNWGTRLVSLSAFVYFALPHRESLGAGNWLLTSSERIWLWTPFVLGWLWTWYFRR HHHHCCCCCHHHHHEEEEEEEEECCCCCCCCCCEEEECCCEEEEECHHHHHHHHHHHHHH SQSLFKTSPGTSQ CCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]