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The map label for this gene is crp [H]

Identifier: 158338244

GI number: 158338244

Start: 5202509

End: 5203210

Strand: Reverse

Name: crp [H]

Synonym: AM1_5140

Alternate gene names: 158338244

Gene position: 5203210-5202509 (Counterclockwise)

Preceding gene: 158338246

Following gene: 158338243

Centisome position: 80.0

GC content: 47.44

Gene sequence:

>702_bases
ATGGATGATCGGCACAGTTCCCGTGACGACAAACTAGAAACTCAGCTTCGTTCAACGCCCTTTTTTGCTGGTCTACCTGA
TCCAGTAGTTGATCAAGCGGTTGCTCAAGTTGTGACCCGCGAACATCCTGCAAATAGGGTGATTCTTCTAGAAAATGATT
GGGGAAGTTCCGTTTACTTCATTTTGAATGGATGGGTCAAAATCCGGACCTATAACATCGATGGCAAAGAAGTCACCTTA
AATATTGTCGGCAAGGGTGAGATTTTTGGCGAAATGGCTCCCTTAGATGAGGTTCCCCGTTCTACAGATGTGATTACCCT
TACCCCCACAACTGTAGCGAATATGCCTTCTACGGATTTTGTGAACTTAATGCAGACGCAGCCTCAAGCTGGCATCCGTC
TGGCCAAGCTAATGGCTCGTCGTTTGCGGCAGCTTAATCGGCGGTTACGATTGAGAGAGGCAGATGCTCAATCCCGCGTG
GCCGATATCCTTCTGTTCTTAGCAGAAGGTCAAGGAATAGAAGGGAAAGGGGGCATAGAGATTCCCAATTTACCTCATCG
AGAGTTAAGCAGCCTTAGCGGCATGGCCCGAGAGACGGTGACTCGCCAATTAGGTAAGCTGGAAAACAAAGGCCTTATTC
AACGCAATCAGGATGTGCTGTGCATCATTGATACTGATGCCCTAGAAGATTTGATTCTATAG

Upstream 100 bases:

>100_bases
TTTCCTCAAGGAGGGAAGTTTGTTTGTTATGGTTGCTTCAAGCCAGTAATTGTGCTTCACTCCTTTTGATACCGTCTCAT
TTCTCCCCCCTAAAACGTCT

Downstream 100 bases:

>100_bases
CTGTTGGGTTATCCATCTGTAGACTGGCCTATTCCAGTCGGATCGAAACGTTGATGCTTGCGTATGGGTGAGCATACTCT
TGGGGGTTTGATCCACCAGC

Product: Crp/FNR family transcriptional regulator

Products: NA

Alternate protein names: cAMP receptor protein; cAMP regulatory protein [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MDDRHSSRDDKLETQLRSTPFFAGLPDPVVDQAVAQVVTREHPANRVILLENDWGSSVYFILNGWVKIRTYNIDGKEVTL
NIVGKGEIFGEMAPLDEVPRSTDVITLTPTTVANMPSTDFVNLMQTQPQAGIRLAKLMARRLRQLNRRLRLREADAQSRV
ADILLFLAEGQGIEGKGGIEIPNLPHRELSSLSGMARETVTRQLGKLENKGLIQRNQDVLCIIDTDALEDLIL

Sequences:

>Translated_233_residues
MDDRHSSRDDKLETQLRSTPFFAGLPDPVVDQAVAQVVTREHPANRVILLENDWGSSVYFILNGWVKIRTYNIDGKEVTL
NIVGKGEIFGEMAPLDEVPRSTDVITLTPTTVANMPSTDFVNLMQTQPQAGIRLAKLMARRLRQLNRRLRLREADAQSRV
ADILLFLAEGQGIEGKGGIEIPNLPHRELSSLSGMARETVTRQLGKLENKGLIQRNQDVLCIIDTDALEDLIL
>Mature_233_residues
MDDRHSSRDDKLETQLRSTPFFAGLPDPVVDQAVAQVVTREHPANRVILLENDWGSSVYFILNGWVKIRTYNIDGKEVTL
NIVGKGEIFGEMAPLDEVPRSTDVITLTPTTVANMPSTDFVNLMQTQPQAGIRLAKLMARRLRQLNRRLRLREADAQSRV
ADILLFLAEGQGIEGKGGIEIPNLPHRELSSLSGMARETVTRQLGKLENKGLIQRNQDVLCIIDTDALEDLIL

Specific function: This protein complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of one or more genes involved in the induction of competence [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789756, Length=202, Percent_Identity=27.2277227722772, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR018488
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 26036; Mature: 26036

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDRHSSRDDKLETQLRSTPFFAGLPDPVVDQAVAQVVTREHPANRVILLENDWGSSVYF
CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEE
ILNGWVKIRTYNIDGKEVTLNIVGKGEIFGEMAPLDEVPRSTDVITLTPTTVANMPSTDF
EEECEEEEEEEECCCCEEEEEEEECCCHHCCCCCHHHCCCCCCEEEECCCCCCCCCCHHH
VNLMQTQPQAGIRLAKLMARRLRQLNRRLRLREADAQSRVADILLFLAEGQGIEGKGGIE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
IPNLPHRELSSLSGMARETVTRQLGKLENKGLIQRNQDVLCIIDTDALEDLIL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECHHHHHHCC
>Mature Secondary Structure
MDDRHSSRDDKLETQLRSTPFFAGLPDPVVDQAVAQVVTREHPANRVILLENDWGSSVYF
CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEE
ILNGWVKIRTYNIDGKEVTLNIVGKGEIFGEMAPLDEVPRSTDVITLTPTTVANMPSTDF
EEECEEEEEEEECCCCEEEEEEEECCCHHCCCCCHHHCCCCCCEEEECCCCCCCCCCHHH
VNLMQTQPQAGIRLAKLMARRLRQLNRRLRLREADAQSRVADILLFLAEGQGIEGKGGIE
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
IPNLPHRELSSLSGMARETVTRQLGKLENKGLIQRNQDVLCIIDTDALEDLIL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1542653; 7542800 [H]