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The map label for this gene is 158338162

Identifier: 158338162

GI number: 158338162

Start: 5100514

End: 5100954

Strand: Reverse

Name: 158338162

Synonym: AM1_5054

Alternate gene names: NA

Gene position: 5100954-5100514 (Counterclockwise)

Preceding gene: 158338170

Following gene: 158338161

Centisome position: 78.43

GC content: 47.62

Gene sequence:

>441_bases
ATGCCTTTGAGATTAGTACCAACCTTATGTTTAGTAATTGTCTTTAATAGCGTTCTACCTGGAATAGCAACGGCAACACC
TGCAGAGCAGCACCGCAGCTTTAAAAGACCCATCACCGTTCGCCAGCCTCTACCTGACACGCTACAAACGGCTCAGGACT
GGCAAACGGTGGGAATGAATGCTTTGATTGTCGAGGATTATATCAATAGCCTCCAAGCCTTTAATAAAGCGGTAGATCTC
TCCGCTGGACAAAACCCACAAATTCTGGAGCAGCGAGGTTGGGTTCATTATTTGCAAGAGCAATATGAACGTGCGATCTC
AGATTTAAACCAAGCGGCAGCCCTTTACCAAGCGCAATCCCAGGCCGCCAACTATCGCAACGTTCGTCGCATGCGGCTGT
TTATTGAAACCCAAGCCGACGAACTCAATCTTTCCAGCTAA

Upstream 100 bases:

>100_bases
CCATCTCTATCTTTGGAGAGAGACATAATCCTGTCTTTTAGAAGATGTATGAAGCTCCTGAATTTTCTAAGGTGGAGATT
AGTAATGACACGAGCTATTT

Downstream 100 bases:

>100_bases
ACGACACTATGTATACTCCAACCAAATCGAATTGGCTAGCAACCACTTTCAGACTCGACGGCTCCGTCGCGGGCATTATC
CTGCCTCGAATTCTGGCCTT

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MPLRLVPTLCLVIVFNSVLPGIATATPAEQHRSFKRPITVRQPLPDTLQTAQDWQTVGMNALIVEDYINSLQAFNKAVDL
SAGQNPQILEQRGWVHYLQEQYERAISDLNQAAALYQAQSQAANYRNVRRMRLFIETQADELNLSS

Sequences:

>Translated_146_residues
MPLRLVPTLCLVIVFNSVLPGIATATPAEQHRSFKRPITVRQPLPDTLQTAQDWQTVGMNALIVEDYINSLQAFNKAVDL
SAGQNPQILEQRGWVHYLQEQYERAISDLNQAAALYQAQSQAANYRNVRRMRLFIETQADELNLSS
>Mature_145_residues
PLRLVPTLCLVIVFNSVLPGIATATPAEQHRSFKRPITVRQPLPDTLQTAQDWQTVGMNALIVEDYINSLQAFNKAVDLS
AGQNPQILEQRGWVHYLQEQYERAISDLNQAAALYQAQSQAANYRNVRRMRLFIETQADELNLSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16524; Mature: 16393

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRLVPTLCLVIVFNSVLPGIATATPAEQHRSFKRPITVRQPLPDTLQTAQDWQTVGMN
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
ALIVEDYINSLQAFNKAVDLSAGQNPQILEQRGWVHYLQEQYERAISDLNQAAALYQAQS
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAANYRNVRRMRLFIETQADELNLSS
HHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PLRLVPTLCLVIVFNSVLPGIATATPAEQHRSFKRPITVRQPLPDTLQTAQDWQTVGMN
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
ALIVEDYINSLQAFNKAVDLSAGQNPQILEQRGWVHYLQEQYERAISDLNQAAALYQAQS
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAANYRNVRRMRLFIETQADELNLSS
HHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA