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The map label for this gene is recA [H]

Identifier: 158338139

GI number: 158338139

Start: 5078111

End: 5079169

Strand: Direct

Name: recA [H]

Synonym: AM1_5031

Alternate gene names: 158338139

Gene position: 5078111-5079169 (Clockwise)

Preceding gene: 158338135

Following gene: 158338140

Centisome position: 78.08

GC content: 51.75

Gene sequence:

>1059_bases
ATGGCCACCCATACCGACGCTTCCGAAAAGCAAAAAGCCCTGGACTTGGTGATGAAAAATGTGGAACGGACCTTTGGTAA
AGGGTCAATTATGCGTCTTGGGGATGCCACGCGGATGCAGATTGAAACCATTTCTACAGGCGCTTTGACTCTGGATCTGG
CGTTGGGGGGCGGGCTACCCAGGGGACGAGTGATTGAGATCTATGGTCCTGAAAGTTCTGGAAAAACCACCGTAGCGTTA
CATGCGATCGCACAGATCCAAAAAAACGGCGGAGTCGCGGCCTTCGTCGATGCTGAACATGCCCTAGACCCGGTCTATGC
CGCTGCCTTGGGGGTCGATGTTTCTGAACTTCTGGTCAGCCAGCCTGACTCCGGCGAGATGGCCCTAGAAATTGTCGATC
AGCTGGTCCGCTCTAGTGCCGTTGATCTGGTGGTGGTGGATTCCGTGGCTGCCCTCACCCCCCGTGCTGAAATCGAAGGG
GATATGGGCGATTCCCACATGGGATTACAGGCTCGGTTAATGAGTCAGGCCCTCAGAAAAATCACCAGTAATATTTCCAA
ATCCGGCAGTACTGTTATTTTCCTCAACCAGCTTCGCCAGAAGATTGGTGTGACCTACGGTAGCCCCGAAGTCACCACAG
GCGGAAACGCCCTCAAATTCTATGCTTCCGTTCGCCTCGATATCCGCCGCATTCAAACCCTCAAAAAAGGCACGGATATG
TTTGGGATTCGGGCCAAAGTCAAAGTCGCCAAGAACAAAGTGGCTCCTCCGTTTCGAATTGCCGAGTTTGACATTCTGTT
CGGCCAAGGCATTTCCACTACAGGATGCCTGGTTGATATGGCCGAAGAAACAGATGTGATTGTTCGCAAAGGGGCTTGGT
ATAGCTTCGATGGCAACAATATTGGCCAGGGACGAGAAAATACGATTCAGTACTTTATCGATAATCCGGAATTCGCTGAG
AATGTCGAGCAACAAGTCCGCCAGAAGTTGGAGTTAGGGGCTGAAGTCTCTGCCAATTCGATCACAGCTGTGGAAGTTGA
GGAAGAAGAGGCCGCATAA

Upstream 100 bases:

>100_bases
AAGAGGAAAAAGAAACTTTTTTTGCCCTGTTGACACAAGACTAGTACAAGTATACTATACTAGTCGAACAACCTCAAATT
ATCCTTTTGGAGACCCAATC

Downstream 100 bases:

>100_bases
TACCGGCTTAATCTCCATCCCCTATCATTTCAACGCTTAATTTGTCCGACCTGATTCTTACATTGAGGAACATTCAATGA
TTGGATATGTGACTTTAGGT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MATHTDASEKQKALDLVMKNVERTFGKGSIMRLGDATRMQIETISTGALTLDLALGGGLPRGRVIEIYGPESSGKTTVAL
HAIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVSQPDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEG
DMGDSHMGLQARLMSQALRKITSNISKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLKKGTDM
FGIRAKVKVAKNKVAPPFRIAEFDILFGQGISTTGCLVDMAEETDVIVRKGAWYSFDGNNIGQGRENTIQYFIDNPEFAE
NVEQQVRQKLELGAEVSANSITAVEVEEEEAA

Sequences:

>Translated_352_residues
MATHTDASEKQKALDLVMKNVERTFGKGSIMRLGDATRMQIETISTGALTLDLALGGGLPRGRVIEIYGPESSGKTTVAL
HAIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVSQPDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEG
DMGDSHMGLQARLMSQALRKITSNISKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLKKGTDM
FGIRAKVKVAKNKVAPPFRIAEFDILFGQGISTTGCLVDMAEETDVIVRKGAWYSFDGNNIGQGRENTIQYFIDNPEFAE
NVEQQVRQKLELGAEVSANSITAVEVEEEEAA
>Mature_351_residues
ATHTDASEKQKALDLVMKNVERTFGKGSIMRLGDATRMQIETISTGALTLDLALGGGLPRGRVIEIYGPESSGKTTVALH
AIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVSQPDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEGD
MGDSHMGLQARLMSQALRKITSNISKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLKKGTDMF
GIRAKVKVAKNKVAPPFRIAEFDILFGQGISTTGCLVDMAEETDVIVRKGAWYSFDGNNIGQGRENTIQYFIDNPEFAEN
VEQQVRQKLELGAEVSANSITAVEVEEEEAA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=322, Percent_Identity=60.8695652173913, Blast_Score=415, Evalue=1e-117,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37818; Mature: 37686

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATHTDASEKQKALDLVMKNVERTFGKGSIMRLGDATRMQIETISTGALTLDLALGGGLP
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCEEEEEEEECCCCC
RGRVIEIYGPESSGKTTVALHAIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVS
CCCEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECHHHHCHHHHHHHCCCHHHHHHC
QPDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRK
CCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHH
ITSNISKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLKKGTDM
HHHHHCCCCCEEEEHHHHHHHHCCCCCCCCEECCCCEEEEEEEHHHHHHHHHHHHCCCCE
FGIRAKVKVAKNKVAPPFRIAEFDILFGQGISTTGCLVDMAEETDVIVRKGAWYSFDGNN
EEEEEEEEEHHCCCCCCEEEEEEEEEECCCCCCCCCEEECCCCCCEEEECCCEEEECCCC
IGQGRENTIQYFIDNPEFAENVEQQVRQKLELGAEVSANSITAVEVEEEEAA
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
ATHTDASEKQKALDLVMKNVERTFGKGSIMRLGDATRMQIETISTGALTLDLALGGGLP
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCEEEEEEEECCCCC
RGRVIEIYGPESSGKTTVALHAIAQIQKNGGVAAFVDAEHALDPVYAAALGVDVSELLVS
CCCEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECHHHHCHHHHHHHCCCHHHHHHC
QPDSGEMALEIVDQLVRSSAVDLVVVDSVAALTPRAEIEGDMGDSHMGLQARLMSQALRK
CCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHH
ITSNISKSGSTVIFLNQLRQKIGVTYGSPEVTTGGNALKFYASVRLDIRRIQTLKKGTDM
HHHHHCCCCCEEEEHHHHHHHHCCCCCCCCEECCCCEEEEEEEHHHHHHHHHHHHCCCCE
FGIRAKVKVAKNKVAPPFRIAEFDILFGQGISTTGCLVDMAEETDVIVRKGAWYSFDGNN
EEEEEEEEEHHCCCCCCEEEEEEEEEECCCCCCCCCEEECCCCCCEEEECCCEEEECCCC
IGQGRENTIQYFIDNPEFAENVEQQVRQKLELGAEVSANSITAVEVEEEEAA
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA