Click here to switch to the map view.

The map label for this gene is yegE [C]

Identifier: 158338106

GI number: 158338106

Start: 5044587

End: 5046323

Strand: Direct

Name: yegE [C]

Synonym: AM1_4996

Alternate gene names: 158338106

Gene position: 5044587-5046323 (Clockwise)

Preceding gene: 158338103

Following gene: 158338107

Centisome position: 77.56

GC content: 51.12

Gene sequence:

>1737_bases
ATGAACTCCGATTCTCAAGTCCCGCCCTCTCCGTCTCCAGGCCGATCACAGCCCGGCCAGAATAGCGCTCAGACTCAGCC
CGTCCAGCCCCAGCAAATCCTAGATGCTTTGCCGGTTGTGGTCTGGCAAGCAGATAGCCAAGGAAGCATTATTTCCTTGA
GTGCTCGGTGGCAAACTTTTACCGGATACTCCTCCCAACTCTCCCTGGGAGAGGCATTTTGGGATAGGGTGGCAGAACAA
GAAGTAGCGTTAAGTCGGCAACAGTGGCAGACGTTCTGCCAACAACAGCAGCCTTTTACTCTTTATCTGAATGTGGTTCA
GACAGGGGGGACGTTTAGTCGGGTTCTTGTCATGGGGGAACCCCTGCAAGATGAACAAGCACAGCCGATTGGTTGGGTGG
GGACAATGCAGTTGGTTGATGAGTTGGAACCGGCGTCACCTGAGTTGGATTATGGTCAACATTTCTTGGCGGCCGTTTTA
GATAACCTCTCCAATGGCATTGTGGCCTGTGATTCCCAAGGCGTTTTGACCCTTACTAATCGGGCCACCCAGGAAATCCA
TCAAAAACCCTTTCGTCAAATTCCGGCGGAACAATGGGCGGATTACTATCAGTTGTACCGACCAGATGGCATCACCGTTC
TCGAACGGGATGAAAACCCTTTGTATCAAGCGCTGTTAGGGGAGTCGGTGCAAAATGCCGAGGTGATGATTAAGCCTGCT
CAGGGACCACCCCATACGGTGCTGGCGAGTGGAGATCCCATCATTGCGAAAGATGGCCAAACCTTGGGGGCCGTGGTGAT
TCTGCAGGATATCACCGAACGGAAAAAGGCTGAACAGGAATTACAAGAAAGTGAAGAACGCTGGCAGTTGGCGTTGCAAG
GGGCTGGTGACGGTATTTTTGATTGGAGTCTCGTCACCAATAAAGCGTTTCTCTCCCTACCCTGGAAGCAGACCTTAGGT
TATGAAGCCCATGAGGTAGAGAACAGCTTTGAAGGCTGGCGATCCTTAGTACACCCGGATGATTTAGAGGATGCAGCGGC
AGCGTTGGAAGCGCACTTTAAACAAGAAGAACCCTTGTACCAATCAGAGTTTCGGATGCGGTGCAAGGATGGTACGTATA
AGTGGATTCTCGCCCGAGGTCAGACCCAAAGGGATGCAGATGGACAACCGATCCGCATGTTGGGATTGCACCAGGATATA
ACCCCTCAGAAACTGGCAGAACAAAAGCTGGCTGAAATGAACCGGGCATTAGAGTCTCGCGTCAACACCCAAGACTCCCA
GTTAGCGGAGGCCAATCACCAAAACGAAGCATTAGCGGCCCAAGAACAGACGGCCCGTCAGCAGGCCCAAGTTGCCCAAG
CAGAAACTGAACTCTACGAAAAAATTGTCAACAATATTCAAGTGGGTTTCCTGGTTTGGCATTCGACCGATTTAACCTCT
ATTGAATCCTTTGAGTTGCTCATGGCTAACCCAGCAGCAGAGCGGCTGCTAGAAATGGAACTGCAGGACAAAATAGGGGA
TCTGATTGGTGCTGTTTTCCCCGATTATGTCCAAAATCATCCCAACAACTTGTTGGCACTTTTGCAAGTGATTCGGAGTC
AGCAACCCCGCACCATGGGCAATGCCAGTATTTTGCTACCAACCGGAGCAACACGAGTTCTGTGCTTGCGGGCTTTTCCC
TTACCAGATGCGTGTGTTGGTATTGCATTTGAACCCACGGCTGATGCTTCGGTTTGA

Upstream 100 bases:

>100_bases
AATGTTACCAATTGGTCCTAGAAGCTAAAGAATTATCAGGTAATTTCTTAGAGGCTGAAGGGTTTGGATGGAGAATTTTA
ACTAGCGCTTCGCCAATACC

Downstream 100 bases:

>100_bases
AGGGTGAGAGGGTAGCCGTCGATGTCTACTTCTTTCGGTAGATGCCGTGCAGAAGCAAACTCCTTCTCTTGCCAGATGGA
ATGCTAGGCAGAATTCCCTA

Product: PAS/PAC domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MNSDSQVPPSPSPGRSQPGQNSAQTQPVQPQQILDALPVVVWQADSQGSIISLSARWQTFTGYSSQLSLGEAFWDRVAEQ
EVALSRQQWQTFCQQQQPFTLYLNVVQTGGTFSRVLVMGEPLQDEQAQPIGWVGTMQLVDELEPASPELDYGQHFLAAVL
DNLSNGIVACDSQGVLTLTNRATQEIHQKPFRQIPAEQWADYYQLYRPDGITVLERDENPLYQALLGESVQNAEVMIKPA
QGPPHTVLASGDPIIAKDGQTLGAVVILQDITERKKAEQELQESEERWQLALQGAGDGIFDWSLVTNKAFLSLPWKQTLG
YEAHEVENSFEGWRSLVHPDDLEDAAAALEAHFKQEEPLYQSEFRMRCKDGTYKWILARGQTQRDADGQPIRMLGLHQDI
TPQKLAEQKLAEMNRALESRVNTQDSQLAEANHQNEALAAQEQTARQQAQVAQAETELYEKIVNNIQVGFLVWHSTDLTS
IESFELLMANPAAERLLEMELQDKIGDLIGAVFPDYVQNHPNNLLALLQVIRSQQPRTMGNASILLPTGATRVLCLRAFP
LPDACVGIAFEPTADASV

Sequences:

>Translated_578_residues
MNSDSQVPPSPSPGRSQPGQNSAQTQPVQPQQILDALPVVVWQADSQGSIISLSARWQTFTGYSSQLSLGEAFWDRVAEQ
EVALSRQQWQTFCQQQQPFTLYLNVVQTGGTFSRVLVMGEPLQDEQAQPIGWVGTMQLVDELEPASPELDYGQHFLAAVL
DNLSNGIVACDSQGVLTLTNRATQEIHQKPFRQIPAEQWADYYQLYRPDGITVLERDENPLYQALLGESVQNAEVMIKPA
QGPPHTVLASGDPIIAKDGQTLGAVVILQDITERKKAEQELQESEERWQLALQGAGDGIFDWSLVTNKAFLSLPWKQTLG
YEAHEVENSFEGWRSLVHPDDLEDAAAALEAHFKQEEPLYQSEFRMRCKDGTYKWILARGQTQRDADGQPIRMLGLHQDI
TPQKLAEQKLAEMNRALESRVNTQDSQLAEANHQNEALAAQEQTARQQAQVAQAETELYEKIVNNIQVGFLVWHSTDLTS
IESFELLMANPAAERLLEMELQDKIGDLIGAVFPDYVQNHPNNLLALLQVIRSQQPRTMGNASILLPTGATRVLCLRAFP
LPDACVGIAFEPTADASV
>Mature_578_residues
MNSDSQVPPSPSPGRSQPGQNSAQTQPVQPQQILDALPVVVWQADSQGSIISLSARWQTFTGYSSQLSLGEAFWDRVAEQ
EVALSRQQWQTFCQQQQPFTLYLNVVQTGGTFSRVLVMGEPLQDEQAQPIGWVGTMQLVDELEPASPELDYGQHFLAAVL
DNLSNGIVACDSQGVLTLTNRATQEIHQKPFRQIPAEQWADYYQLYRPDGITVLERDENPLYQALLGESVQNAEVMIKPA
QGPPHTVLASGDPIIAKDGQTLGAVVILQDITERKKAEQELQESEERWQLALQGAGDGIFDWSLVTNKAFLSLPWKQTLG
YEAHEVENSFEGWRSLVHPDDLEDAAAALEAHFKQEEPLYQSEFRMRCKDGTYKWILARGQTQRDADGQPIRMLGLHQDI
TPQKLAEQKLAEMNRALESRVNTQDSQLAEANHQNEALAAQEQTARQQAQVAQAETELYEKIVNNIQVGFLVWHSTDLTS
IESFELLMANPAAERLLEMELQDKIGDLIGAVFPDYVQNHPNNLLALLQVIRSQQPRTMGNASILLPTGATRVLCLRAFP
LPDACVGIAFEPTADASV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788381, Length=151, Percent_Identity=29.1390728476821, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 64298; Mature: 64298

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSDSQVPPSPSPGRSQPGQNSAQTQPVQPQQILDALPVVVWQADSQGSIISLSARWQTF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCEEEEECCCCCCEEEEEECEEEE
TGYSSQLSLGEAFWDRVAEQEVALSRQQWQTFCQQQQPFTLYLNVVQTGGTFSRVLVMGE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECC
PLQDEQAQPIGWVGTMQLVDELEPASPELDYGQHFLAAVLDNLSNGIVACDSQGVLTLTN
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEECH
RATQEIHQKPFRQIPAEQWADYYQLYRPDGITVLERDENPLYQALLGESVQNAEVMIKPA
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCEEEEECC
QGPPHTVLASGDPIIAKDGQTLGAVVILQDITERKKAEQELQESEERWQLALQGAGDGIF
CCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEE
DWSLVTNKAFLSLPWKQTLGYEAHEVENSFEGWRSLVHPDDLEDAAAALEAHFKQEEPLY
EEHHHHCCCEEECCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCH
QSEFRMRCKDGTYKWILARGQTQRDADGQPIRMLGLHQDITPQKLAEQKLAEMNRALESR
HHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
VNTQDSQLAEANHQNEALAAQEQTARQQAQVAQAETELYEKIVNNIQVGFLVWHSTDLTS
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC
IESFELLMANPAAERLLEMELQDKIGDLIGAVFPDYVQNHPNNLLALLQVIRSQQPRTMG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCCCC
NASILLPTGATRVLCLRAFPLPDACVGIAFEPTADASV
CCEEEECCCCCEEEEEECCCCCCHHEEEEECCCCCCCC
>Mature Secondary Structure
MNSDSQVPPSPSPGRSQPGQNSAQTQPVQPQQILDALPVVVWQADSQGSIISLSARWQTF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCEEEEECCCCCCEEEEEECEEEE
TGYSSQLSLGEAFWDRVAEQEVALSRQQWQTFCQQQQPFTLYLNVVQTGGTFSRVLVMGE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEECC
PLQDEQAQPIGWVGTMQLVDELEPASPELDYGQHFLAAVLDNLSNGIVACDSQGVLTLTN
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEECH
RATQEIHQKPFRQIPAEQWADYYQLYRPDGITVLERDENPLYQALLGESVQNAEVMIKPA
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCEEEEECC
QGPPHTVLASGDPIIAKDGQTLGAVVILQDITERKKAEQELQESEERWQLALQGAGDGIF
CCCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEE
DWSLVTNKAFLSLPWKQTLGYEAHEVENSFEGWRSLVHPDDLEDAAAALEAHFKQEEPLY
EEHHHHCCCEEECCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCH
QSEFRMRCKDGTYKWILARGQTQRDADGQPIRMLGLHQDITPQKLAEQKLAEMNRALESR
HHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
VNTQDSQLAEANHQNEALAAQEQTARQQAQVAQAETELYEKIVNNIQVGFLVWHSTDLTS
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC
IESFELLMANPAAERLLEMELQDKIGDLIGAVFPDYVQNHPNNLLALLQVIRSQQPRTMG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCCCC
NASILLPTGATRVLCLRAFPLPDACVGIAFEPTADASV
CCEEEECCCCCEEEEEECCCCCCHHEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]