| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is eda [H]
Identifier: 158338002
GI number: 158338002
Start: 4938357
End: 4939004
Strand: Reverse
Name: eda [H]
Synonym: AM1_4889
Alternate gene names: 158338002
Gene position: 4939004-4938357 (Counterclockwise)
Preceding gene: 158338003
Following gene: 158338001
Centisome position: 75.94
GC content: 51.54
Gene sequence:
>648_bases TTGACGCAAAATCTTTGGTTAAAGACGGTGAGACATCATCGTGCAATTGGTGTAGTTCGGGCTCCTGAGTTAACCCTTGG TGTTCGCATGGCGGAGGCGATTGCTCAAGCTGGGATGACGCTAATCGAAATTGCCTGGAATAGCTATCAATCCGCGACCC TGGTGACTCAGCTCCGTGAAATTCTACCCAACTGTCAAATTGGTGTGGGAACGATTCTGACGGTTGATCAGCTACATTTT GCGATCGCAGCGGGCGCACAGTTTTGTTTCTGCCCACATGTCAACTTGAACATTATTCAGGCAGCGGTGGCCCAAGATAT CCCCATTATCCCTGGAGCCTTATCTCCCACTGAGATCGTTACGGCCTGGCAGGCAGGGGCCAGTAGTGTCAAGATTTTTC CGGTGGAAATGATGGGAGGCAGCCAATATATCCAGAGTTTGCAGGGGCCTTTAGGGCATATCCCTGTGATTCCCACGGGG GGCGTAACCCTAGAAAACGCGGTGGCCCTGATACAAGCAGGAGCAGTGGGTGTGGGGCTATCGAGTTACTTATTTCCCAA AGAAGCACTCCAAGCTGAGGATTGGCCAGCTATCACCCGCCGAACAGAGCAGCTATTGCAACAATTACAGGACCTCTGCT GCGATTAA
Upstream 100 bases:
>100_bases CACGAGTGTTGAGATCGACCTTTAAGCATCTCTACATCCGCTGGATTAAAGAACCGATGGCAGCCTATGCTCAGCGGTAG GTGACGATAGCTTTTTCACT
Downstream 100 bases:
>100_bases TGGAGCGGCACAACTGGTCCAACAGCGCTCTCGTGAGGTTGGTTACAATGACGGGGAGCGATATGTTGGGAATGGATGAT TATCGTGTTGATACTGGGGA
Product: keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase
Products: NA
Alternate protein names: KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTQNLWLKTVRHHRAIGVVRAPELTLGVRMAEAIAQAGMTLIEIAWNSYQSATLVTQLREILPNCQIGVGTILTVDQLHF AIAAGAQFCFCPHVNLNIIQAAVAQDIPIIPGALSPTEIVTAWQAGASSVKIFPVEMMGGSQYIQSLQGPLGHIPVIPTG GVTLENAVALIQAGAVGVGLSSYLFPKEALQAEDWPAITRRTEQLLQQLQDLCCD
Sequences:
>Translated_215_residues MTQNLWLKTVRHHRAIGVVRAPELTLGVRMAEAIAQAGMTLIEIAWNSYQSATLVTQLREILPNCQIGVGTILTVDQLHF AIAAGAQFCFCPHVNLNIIQAAVAQDIPIIPGALSPTEIVTAWQAGASSVKIFPVEMMGGSQYIQSLQGPLGHIPVIPTG GVTLENAVALIQAGAVGVGLSSYLFPKEALQAEDWPAITRRTEQLLQQLQDLCCD >Mature_214_residues TQNLWLKTVRHHRAIGVVRAPELTLGVRMAEAIAQAGMTLIEIAWNSYQSATLVTQLREILPNCQIGVGTILTVDQLHFA IAAGAQFCFCPHVNLNIIQAAVAQDIPIIPGALSPTEIVTAWQAGASSVKIFPVEMMGGSQYIQSLQGPLGHIPVIPTGG VTLENAVALIQAGAVGVGLSSYLFPKEALQAEDWPAITRRTEQLLQQLQDLCCD
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
GO:0003824: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
GO:0008152: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1788156, Length=180, Percent_Identity=28.8888888888889, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI48994954, Length=155, Percent_Identity=35.4838709677419, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.2.14 [H]
Molecular weight: Translated: 23043; Mature: 22912
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNLWLKTVRHHRAIGVVRAPELTLGVRMAEAIAQAGMTLIEIAWNSYQSATLVTQLRE CCCCHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH ILPNCQIGVGTILTVDQLHFAIAAGAQFCFCPHVNLNIIQAAVAQDIPIIPGALSPTEIV HCCCCCCCCCCEEHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHH TAWQAGASSVKIFPVEMMGGSQYIQSLQGPLGHIPVIPTGGVTLENAVALIQAGAVGVGL HHHHCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHCCH SSYLFPKEALQAEDWPAITRRTEQLLQQLQDLCCD HHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQNLWLKTVRHHRAIGVVRAPELTLGVRMAEAIAQAGMTLIEIAWNSYQSATLVTQLRE CCCHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH ILPNCQIGVGTILTVDQLHFAIAAGAQFCFCPHVNLNIIQAAVAQDIPIIPGALSPTEIV HCCCCCCCCCCEEHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHH TAWQAGASSVKIFPVEMMGGSQYIQSLQGPLGHIPVIPTGGVTLENAVALIQAGAVGVGL HHHHCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHCCH SSYLFPKEALQAEDWPAITRRTEQLLQQLQDLCCD HHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]