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The map label for this gene is epsN [H]

Identifier: 158337949

GI number: 158337949

Start: 4873324

End: 4874544

Strand: Reverse

Name: epsN [H]

Synonym: AM1_4836

Alternate gene names: 158337949

Gene position: 4874544-4873324 (Counterclockwise)

Preceding gene: 158337951

Following gene: 158337943

Centisome position: 74.95

GC content: 47.17

Gene sequence:

>1221_bases
TTGCAACACTTTCAATCTGAAACCTCAGATAATAGAACTCCCGATACCAGCGAACCTAATATTGCTGACCATTCAGACCT
TGATATCCAAAAAACAGCACCCCCAATTCTTCTATCTCCACCACATTTGGGTACAGATGAGTTGGGCTTTGTGGTGAATG
CGTTTGAAACCAATTGGATTGCGCCTGCAGGGCCACATTTAGATGCCTTTGAACAGGAATTTAGTGAAGCAGTGGGAATT
TCCCATGCAGCAGCCCTGAGTTCAGGTACGGCTGGCATACATCTAGCGTTGCAGCTGGTAGGCGTTGAACCGGGTGACGA
AGTATTTTGTTCGACGCTAACCTTTGTTGCTAGCGCGAATCCGATTCTGTATCAAGGGGCAGTGCCTGTTTTTATAGACA
GCGAACGCACCTCCTGGAATATGGATCCTAACTTACTCTCGCAGGCCTTAAGACAGCGAGCTCGCCTAGGTAAATTACCA
AAGGCCGTTGTCTTAGTCCATTTATACGGTCAAAGTGCGGATCTTGGACCGATTTTAGAACTCTGCAATGAGTACGATAT
TCCCCTGATTGAGGATGCTGCTGAATCTCTGGGAGCAACCTATCAGGGCAAAGCTACGGGCACCTTTGGCCGACTGGGAG
TGTTCTCTTTTAATGGCAATAAAATTATCACTACTTCTGGTGGAGGAATGTTGGTTTCAGAAGATGCCACGTTAATTGCC
AAAGCTCGTTTCTTGTCGACACAAGCCAGAGATATAGCTCCTCATTACCAACATTCCCACTTGGGATATAACTATCGTCT
TAGTAATGTCTTAGCGGGTATAGGTCGGGGCCAACTCAGGCTCTTATCCAAAAAAGTCGCTGCCCGACGTCGCATCTATC
ATCGATATCTTCAAGATCTGGGGTCATTACCTGGGTTAACCTTAATGCCGGAGCCCACTTTCGGACGGGCAACGCACTGG
TTATCCTGTATGCTGATTGACCCTCGCAAATTTGGAGTGAGCCGAAATAGGGTCCAAGAAGCTCTACGGGATCATCAAAT
TGAGTCCCGACCCGTTTGGAAACCTTTGCACCTGCAGCCACTGTTTGCTCAATGCGACCATATTGGCGGTACAGTGTCCG
AAGATTTGTTTAATAATGGTATTTGCTTGCCGTCTGGTTCTGGCATGACAGATGCAGATTTGGATCGCGTCATTGCCATT
ATTTCATCCCTTGCCTCATGA

Upstream 100 bases:

>100_bases
AATTTCTGAAATTCTCCAAGTTCAGGAGCAGTCTGATCTCAAATTTGGGGAAATTTCTGTGCGAAAAGGTTGGATTCAGC
AAGATACCGTTAACTTTTTC

Downstream 100 bases:

>100_bases
GGGTTGAGATAATTTGATAGTTTCATCTCTACAGCGATGGGAAAACTATCCTTCCGGCCAGGCGTAAATTTTCTATGAGG
TCTTCAATCTTGAGAGATTT

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MQHFQSETSDNRTPDTSEPNIADHSDLDIQKTAPPILLSPPHLGTDELGFVVNAFETNWIAPAGPHLDAFEQEFSEAVGI
SHAAALSSGTAGIHLALQLVGVEPGDEVFCSTLTFVASANPILYQGAVPVFIDSERTSWNMDPNLLSQALRQRARLGKLP
KAVVLVHLYGQSADLGPILELCNEYDIPLIEDAAESLGATYQGKATGTFGRLGVFSFNGNKIITTSGGGMLVSEDATLIA
KARFLSTQARDIAPHYQHSHLGYNYRLSNVLAGIGRGQLRLLSKKVAARRRIYHRYLQDLGSLPGLTLMPEPTFGRATHW
LSCMLIDPRKFGVSRNRVQEALRDHQIESRPVWKPLHLQPLFAQCDHIGGTVSEDLFNNGICLPSGSGMTDADLDRVIAI
ISSLAS

Sequences:

>Translated_406_residues
MQHFQSETSDNRTPDTSEPNIADHSDLDIQKTAPPILLSPPHLGTDELGFVVNAFETNWIAPAGPHLDAFEQEFSEAVGI
SHAAALSSGTAGIHLALQLVGVEPGDEVFCSTLTFVASANPILYQGAVPVFIDSERTSWNMDPNLLSQALRQRARLGKLP
KAVVLVHLYGQSADLGPILELCNEYDIPLIEDAAESLGATYQGKATGTFGRLGVFSFNGNKIITTSGGGMLVSEDATLIA
KARFLSTQARDIAPHYQHSHLGYNYRLSNVLAGIGRGQLRLLSKKVAARRRIYHRYLQDLGSLPGLTLMPEPTFGRATHW
LSCMLIDPRKFGVSRNRVQEALRDHQIESRPVWKPLHLQPLFAQCDHIGGTVSEDLFNNGICLPSGSGMTDADLDRVIAI
ISSLAS
>Mature_406_residues
MQHFQSETSDNRTPDTSEPNIADHSDLDIQKTAPPILLSPPHLGTDELGFVVNAFETNWIAPAGPHLDAFEQEFSEAVGI
SHAAALSSGTAGIHLALQLVGVEPGDEVFCSTLTFVASANPILYQGAVPVFIDSERTSWNMDPNLLSQALRQRARLGKLP
KAVVLVHLYGQSADLGPILELCNEYDIPLIEDAAESLGATYQGKATGTFGRLGVFSFNGNKIITTSGGGMLVSEDATLIA
KARFLSTQARDIAPHYQHSHLGYNYRLSNVLAGIGRGQLRLLSKKVAARRRIYHRYLQDLGSLPGLTLMPEPTFGRATHW
LSCMLIDPRKFGVSRNRVQEALRDHQIESRPVWKPLHLQPLFAQCDHIGGTVSEDLFNNGICLPSGSGMTDADLDRVIAI
ISSLAS

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=380, Percent_Identity=32.1052631578947, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI2367285, Length=273, Percent_Identity=28.2051282051282, Blast_Score=116, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR002129
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 44124; Mature: 44124

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHFQSETSDNRTPDTSEPNIADHSDLDIQKTAPPILLSPPHLGTDELGFVVNAFETNWI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCEEEECCCCCC
APAGPHLDAFEQEFSEAVGISHAAALSSGTAGIHLALQLVGVEPGDEVFCSTLTFVASAN
CCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCC
PILYQGAVPVFIDSERTSWNMDPNLLSQALRQRARLGKLPKAVVLVHLYGQSADLGPILE
CEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHH
LCNEYDIPLIEDAAESLGATYQGKATGTFGRLGVFSFNGNKIITTSGGGMLVSEDATLIA
HHCCCCCCHHHHHHHHHCCEECCCCCCCCCCEEEEEECCCEEEEECCCCEEEECCCHHHH
KARFLSTQARDIAPHYQHSHLGYNYRLSNVLAGIGRGQLRLLSKKVAARRRIYHRYLQDL
HHHHHHHHHHHCCCCCHHCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GSLPGLTLMPEPTFGRATHWLSCMLIDPRKFGVSRNRVQEALRDHQIESRPVWKPLHLQP
HCCCCCEECCCCCCCCHHHEEEEEEECHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
LFAQCDHIGGTVSEDLFNNGICLPSGSGMTDADLDRVIAIISSLAS
HHHHHHHCCCCHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQHFQSETSDNRTPDTSEPNIADHSDLDIQKTAPPILLSPPHLGTDELGFVVNAFETNWI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCCCCCCCEEEECCCCCC
APAGPHLDAFEQEFSEAVGISHAAALSSGTAGIHLALQLVGVEPGDEVFCSTLTFVASAN
CCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCC
PILYQGAVPVFIDSERTSWNMDPNLLSQALRQRARLGKLPKAVVLVHLYGQSADLGPILE
CEEEECCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHH
LCNEYDIPLIEDAAESLGATYQGKATGTFGRLGVFSFNGNKIITTSGGGMLVSEDATLIA
HHCCCCCCHHHHHHHHHCCEECCCCCCCCCCEEEEEECCCEEEEECCCCEEEECCCHHHH
KARFLSTQARDIAPHYQHSHLGYNYRLSNVLAGIGRGQLRLLSKKVAARRRIYHRYLQDL
HHHHHHHHHHHCCCCCHHCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GSLPGLTLMPEPTFGRATHWLSCMLIDPRKFGVSRNRVQEALRDHQIESRPVWKPLHLQP
HCCCCCEECCCCCCCCHHHEEEEEEECHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
LFAQCDHIGGTVSEDLFNNGICLPSGSGMTDADLDRVIAIISSLAS
HHHHHHHCCCCHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]