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The map label for this gene is 158337890

Identifier: 158337890

GI number: 158337890

Start: 4816796

End: 4817368

Strand: Reverse

Name: 158337890

Synonym: AM1_4777

Alternate gene names: NA

Gene position: 4817368-4816796 (Counterclockwise)

Preceding gene: 158337891

Following gene: 158337889

Centisome position: 74.07

GC content: 52.88

Gene sequence:

>573_bases
ATGGTCAGCCAAACCAATGAGAAAGCCCTAGAAAACTGCATCGAAAACGCACTAGTACAGGGGGCAGGCTACGAAAAAGG
ATCACCGGCTGACTTTGACCGCGAATTTGCCATCGATACAGAAAAATTCTGGCGCTTTCTAGAGACTACCCAGCCCAACG
AACTCGCCAAAGTCCAGGACCAGCCCAACTGGCAACGCCTCATCCTCGAACGCTTTCACCGCAAGGCAAAAAAAGACGGT
GTCCTGGCCGTGCTCAAAAAAGGCATTTCCATCAACGATGCCGACTTTACCCTGCTCTACAGTCTCCCCTACAACGACGC
CAACCCTGCCATCCGCGAAAATTTCGAGCGCAATATCTTTTCTGTCACTCGCCAAGTCCACTACTCCGAAAGCGATCCGG
GCCTGTCCCTCGATATGGTGCTGTTCGTCAACGGTATCGCCCTGGCCACCATGGAGCTAAAGAACCCCTGGTCTGGCCAG
ACCGTCTACCACGCTAAAAAGCAATACTGCCAGGACCGCGACCCCAAAGAAACCCTGGGTAACTCATCGACTGTATTTTC
ACGGCACCATTGA

Upstream 100 bases:

>100_bases
CTCCTATTGCTGGTCTACGCTAAATCAGACCAAGCTGATGTCAGAATCAACGAGATTCAAACTGCCGTAACCGAAGCCCT
AGAAGAGTGAGAAACAATTC

Downstream 100 bases:

>100_bases
TGAACGACTGCTCTCTGACGAAGGAACTGCAGAGGTCCGCGCTGAAAAAATCGAAGAGGAGAATGGGAAGTTGCGATCTT
TTGAGGGAAAATCGCTCAAT

Product: type I restriction enzyme R protein

Products: NA

Alternate protein names: Type I Restriction- System Restriction Subunit; Type III Restriction Res Subunit; Type I Restriction- System Endonuclease; Type I Restriction- System R Subunit; DEAD/DEAH Box Helicase; Type I Restriction HsdR; Type I Restriction R Protein; Type I Site-Specific Restriction- System R Subunit; Type I Restriction R Subunit; Type I Restriction Protein; Type I Restriction- System; Type I Site-Specific Deoxyribonuclease Chain R; DEAD/DEAH Box Helicase-Like; Type I Site-Specific Deoxyribonuclease; Type 1 Restriction- System R Subunit; Type I Restriction- System Subunit R; Type I Restriction- Deoxyribonuclease R Subunit; HsdR Protein; Type I Endonuclease Restriction R Subunit; Type III Restriction Res Subunit Family; Type I Restriction System Restriction Protein HsdR; Type I Restriction- Subunit R; Type III Restriction; Type I Restriction- System Restriction Subunit R; Type I Site-Specific Restriction- System; Restriction Type I Helicase Subunit; Type I Restriction- System Restriction Subunity; Type-1 Restriction System Restriction Subunit

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MVSQTNEKALENCIENALVQGAGYEKGSPADFDREFAIDTEKFWRFLETTQPNELAKVQDQPNWQRLILERFHRKAKKDG
VLAVLKKGISINDADFTLLYSLPYNDANPAIRENFERNIFSVTRQVHYSESDPGLSLDMVLFVNGIALATMELKNPWSGQ
TVYHAKKQYCQDRDPKETLGNSSTVFSRHH

Sequences:

>Translated_190_residues
MVSQTNEKALENCIENALVQGAGYEKGSPADFDREFAIDTEKFWRFLETTQPNELAKVQDQPNWQRLILERFHRKAKKDG
VLAVLKKGISINDADFTLLYSLPYNDANPAIRENFERNIFSVTRQVHYSESDPGLSLDMVLFVNGIALATMELKNPWSGQ
TVYHAKKQYCQDRDPKETLGNSSTVFSRHH
>Mature_190_residues
MVSQTNEKALENCIENALVQGAGYEKGSPADFDREFAIDTEKFWRFLETTQPNELAKVQDQPNWQRLILERFHRKAKKDG
VLAVLKKGISINDADFTLLYSLPYNDANPAIRENFERNIFSVTRQVHYSESDPGLSLDMVLFVNGIALATMELKNPWSGQ
TVYHAKKQYCQDRDPKETLGNSSTVFSRHH

Specific function: Unknown

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21756; Mature: 21756

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSQTNEKALENCIENALVQGAGYEKGSPADFDREFAIDTEKFWRFLETTQPNELAKVQD
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCHHHHCCC
QPNWQRLILERFHRKAKKDGVLAVLKKGISINDADFTLLYSLPYNDANPAIRENFERNIF
CCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
SVTRQVHYSESDPGLSLDMVLFVNGIALATMELKNPWSGQTVYHAKKQYCQDRDPKETLG
HHHHHHHCCCCCCCCCCHHHHHHCCHHHEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHC
NSSTVFSRHH
CCCCEECCCC
>Mature Secondary Structure
MVSQTNEKALENCIENALVQGAGYEKGSPADFDREFAIDTEKFWRFLETTQPNELAKVQD
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCHHHHCCC
QPNWQRLILERFHRKAKKDGVLAVLKKGISINDADFTLLYSLPYNDANPAIRENFERNIF
CCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
SVTRQVHYSESDPGLSLDMVLFVNGIALATMELKNPWSGQTVYHAKKQYCQDRDPKETLG
HHHHHHHCCCCCCCCCCHHHHHHCCHHHEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHC
NSSTVFSRHH
CCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA