| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337872
Identifier: 158337872
GI number: 158337872
Start: 4799953
End: 4800684
Strand: Direct
Name: 158337872
Synonym: AM1_4758
Alternate gene names: NA
Gene position: 4799953-4800684 (Clockwise)
Preceding gene: 158337869
Following gene: 158337873
Centisome position: 73.8
GC content: 43.31
Gene sequence:
>732_bases GTGAGTAATACAAGTAATTTTCGTAACGCTATTCAAGAGGCCAGACAGAACGCCCTTGTTGGCCCCAATGTTATTCCAAA TGCTCTACCTTACCTAGGTGCAGGCTTAGTTTTAACTGCTGTCGGCGCATGGGGTGGTCTAGGAGTTATTTCTAGCTTTG GCCCCCAAACTTACAGGGCCACTAGTCTGCCAGCGATGATTCTGTTCTTTGTACTCTTCTTCGTGTCACAAAGAGCAGCC ACTAAAGTCAATAACAACGTTGCTTTGCCCCTGTTGGCAACATTCAGCTTAGTTACTGGCTATACCCTATCCTTGCTTGT TGACATCGCTCTAAAAACATCCGGAGTAGGTGAAACGGGGTTAGCGATTGCTGCATTGAGTTGTGGCATTACCTTTATTG CCGCTCGTCCTATTGGAGCAAATCTATCAGATGAAGATGGATTTGCCCTCACCAAAACAATTCAACTAGGGGTGATCGCT TTACTAGTTGTCATGTTTGCCCAAGTCATATGTATGTGGTTTGGCATTATTTCTCCTAGCTGGTTGGAAATTGGGATTTC CGGCATTGGCGTACTGTTGTTTGTTGGAGCAGCTGTTGTTGACTTCTTTGTTCTGCCTAGAACTTATGAAGATGAGCAAT ATTTATCTGCTGCTCTATCCATGTACTTGACCTACGTCAATCTGTTTATCTTTATCCTCAGATTCTTAATCGCAATTAAT AGTAGAGATTAA
Upstream 100 bases:
>100_bases TACGGATAACCCTAAATTTGTTCCTCCCTACTAAAGAGGGAGATAAGGCAAAATGAGAGGTAGCAGACCAGTCAAAGAGT TTGTTTAAAAGAGGAAGTCC
Downstream 100 bases:
>100_bases CGATTGCAGCCGCTAGTGCTTTAGTTTCAGGGGGTTGGATAATTATCCAACCCCCTGAAACTTTTAAATTTCGAACAGAG TCTTTATAAATGAATAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSNTSNFRNAIQEARQNALVGPNVIPNALPYLGAGLVLTAVGAWGGLGVISSFGPQTYRATSLPAMILFFVLFFVSQRAA TKVNNNVALPLLATFSLVTGYTLSLLVDIALKTSGVGETGLAIAALSCGITFIAARPIGANLSDEDGFALTKTIQLGVIA LLVVMFAQVICMWFGIISPSWLEIGISGIGVLLFVGAAVVDFFVLPRTYEDEQYLSAALSMYLTYVNLFIFILRFLIAIN SRD
Sequences:
>Translated_243_residues MSNTSNFRNAIQEARQNALVGPNVIPNALPYLGAGLVLTAVGAWGGLGVISSFGPQTYRATSLPAMILFFVLFFVSQRAA TKVNNNVALPLLATFSLVTGYTLSLLVDIALKTSGVGETGLAIAALSCGITFIAARPIGANLSDEDGFALTKTIQLGVIA LLVVMFAQVICMWFGIISPSWLEIGISGIGVLLFVGAAVVDFFVLPRTYEDEQYLSAALSMYLTYVNLFIFILRFLIAIN SRD >Mature_242_residues SNTSNFRNAIQEARQNALVGPNVIPNALPYLGAGLVLTAVGAWGGLGVISSFGPQTYRATSLPAMILFFVLFFVSQRAAT KVNNNVALPLLATFSLVTGYTLSLLVDIALKTSGVGETGLAIAALSCGITFIAARPIGANLSDEDGFALTKTIQLGVIAL LVVMFAQVICMWFGIISPSWLEIGISGIGVLLFVGAAVVDFFVLPRTYEDEQYLSAALSMYLTYVNLFIFILRFLIAINS RD
Specific function: Unknown
COG id: COG0670
COG function: function code R; Integral membrane protein, interacts with FtsH
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25913; Mature: 25782
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTSNFRNAIQEARQNALVGPNVIPNALPYLGAGLVLTAVGAWGGLGVISSFGPQTYRA CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TSLPAMILFFVLFFVSQRAATKVNNNVALPLLATFSLVTGYTLSLLVDIALKTSGVGETG HCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LAIAALSCGITFIAARPIGANLSDEDGFALTKTIQLGVIALLVVMFAQVICMWFGIISPS HHHHHHHHCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH WLEIGISGIGVLLFVGAAVVDFFVLPRTYEDEQYLSAALSMYLTYVNLFIFILRFLIAIN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SRD CCC >Mature Secondary Structure SNTSNFRNAIQEARQNALVGPNVIPNALPYLGAGLVLTAVGAWGGLGVISSFGPQTYRA CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TSLPAMILFFVLFFVSQRAATKVNNNVALPLLATFSLVTGYTLSLLVDIALKTSGVGETG HCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LAIAALSCGITFIAARPIGANLSDEDGFALTKTIQLGVIALLVVMFAQVICMWFGIISPS HHHHHHHHCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH WLEIGISGIGVLLFVGAAVVDFFVLPRTYEDEQYLSAALSMYLTYVNLFIFILRFLIAIN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SRD CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA