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The map label for this gene is 158337862

Identifier: 158337862

GI number: 158337862

Start: 4785684

End: 4787615

Strand: Reverse

Name: 158337862

Synonym: AM1_4748

Alternate gene names: NA

Gene position: 4787615-4785684 (Counterclockwise)

Preceding gene: 158337863

Following gene: 158337859

Centisome position: 73.61

GC content: 47.98

Gene sequence:

>1932_bases
ATGCGTCGATTGGCTTTTCCACTCGCTTTGGTTTTGGCCTTATCTGCCATGCCTGGCCGGTCTCAGTCACAACTGAAGAT
TAGTGGCCCTCAGTTTCCTCAACCGACAGAAGCTGAATGTGATCAAGATTGGGCGGGGATGCGTCAAGAGCTGGAAAAGG
CATTAGAAAAAACGCCCAAACATGAAATAGCGGGGGGATATCACGCCCTGGGGCAGGCGTTAGAAAGCTGTCAAAAATAT
GATGAAGCGATTGCTGCTTTTGAACGGGGGAAAACCTTACAAAGCTGGCATGCCCAGTACAAGTTCGATATTGCTAGAGT
CCGTATTAGACAGCAAAAATTAACCCAAGCCCTCAATATTTACCGTCAATATCATCAATCTGAATCGAAGCAGCTCTCTG
CTAAGGAAATTGATGGGCTTGCCTACAATGATTTAGGTGAAAATTTGGTTTCGGTGGGTGAGTTGGATCGTGCGATCGCA
ACCTTCGATTACGCGACCCGGCTCACGCCTAAAAATGCTGCGATTTGGAGGAACCTGGGTAAAACCCAAGTCAAAGCCCA
GAAATATGACCCAGCCATCCAGTCTTTCCGTCAGGCAGTCCTCATCAAAGAATCGGCGTCGTTAACGGATAGGCAACTTG
ATGCACGGGCTTACCTGCAGGTGGGACACTATTTAACCTCGACTCAAAAGGTCAAAGAGGGTGTACCGTTTCTAGAAAAT
GCCATTGCCCTCGATCCGCAATACTCAGATGCCTATTTGGTCTTGGGGCAAAATTATGCCCAGCAAAGACGATGGGATGA
AGCGATTACCAATTACACCCAACGGCTTAAACTTTCCCCGAAAAGCGTCTATACCCATACCCTGATGGGCGATGCCCTGA
TTCGAAAACAAGATTTTGAGGGCGCGTTTACCCAATATCGGCAGTTCTTAGGTTCAAACGCGACTAAACCCGATGCTGAG
CTAGATGCTGATGCTTATAAGTGGTTAGCGAAAGCGCTCAAAAAACTCAATCGCTTAGGACCTGCGGTTGAGGCTTATCA
GAAGATCGCAGCTCTACAACCTAAAAACGCCCATGTACTGAATGAAATGGGGGTTGTACTCACAACATTGGAGCGGTGGG
AAGAGGCGATTGTTGTCCTGAGAAAAGCTCAGGATGTTTTTCAGGCGAATCAGGCCGAGCAGTCCGCCCCCTTTGGTTCA
GATATGATTGTGATTAATCTGGGTGGGGCTTTAGCTGGTAATGGTCAAGTAGAGGAGGCGCTGACGGTTCTACGTCCAGT
TGTACAGGACTCACCAGAGAATCCTTTTATACGGATGACCCTCGGTAAGGTTCTACTCCAAGCAGGTCAAAAGCAAGAAG
CTCGCCAACTGTTGCAAACAGGATTGAAAAAGGTGAGTTTCCCCCTGGCTTTTGTGGGAATTGAGACAACCCCTAACGCG
AAATTAGAGACGGTACTCGGACAGCTCTACTTTGAACTCAAACAATATGACTTGGCACTCGCACATTATCAAAAGGCAGT
TCAGATCGACCCTGATTTTGCGGTAGGTCATTTCGCGGTGGGGAATATTCTGCGTCGACAGGGTAAATCCGATCAGGCGA
TTCCAGCCTATGAAAAAGCGCTAAAACTACAACCACGCAATTTATTTTTTACTCACCAGTTCTACAGTGGACGGGGGTTG
GCGTTGTTGGCGCAAGGCAAGGAGGCGGCGGCTATTGCTGATTTTGAACGAGCAACTCAGCTAAATGCCATCAATGTTGA
GGCACTACACGGGCTAGGGAAAGCGTTGCTTCAGCAAAATAAACCATCGGCAGCGATTCCCCATTTGGAAGCGGCTTATG
ATTTGAATCCTGGCTATCCCCAAGTTGCTGAAGATTTGCGGCTTGCGAAGAGCCAAACTTCTGTAGAGTCTAATCCACCT
CAAACGGAATAA

Upstream 100 bases:

>100_bases
ACTTGAAGAGGAACGTCTGATGCCGGTGCCTTCTTCTAAAAGGAAAACGCTCTGTTGAATACAAACCCTTTCCCATCCGC
TGTATACGAAGGATTAAAAT

Downstream 100 bases:

>100_bases
TTGCATGGCTCAAGGGACAGAGTGGATTTGCTGAGGATGATTATCGAGGTGGCAAGAGCTGATCACGAATCCGCTGTAAG
TTCAGAGCTGTAAAGGGTTC

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Sulfotransferase; Tetratricopeptide Repeat Domain Protein; Peptidase; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Repeat Family; Glycosyl Transferase Family Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; O-Linked GlcNAc Transferase; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Protein; TPR Repeat Protein; TPR Domain Containing Protein; PEP-CTERM System TPR-Repeat Lipoprotein; Serine/Threonine Protein Kinase With TPR Repeats; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; TPR Repeat- And Protein Kinase Domain-Containing Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Protein Kinase

Number of amino acids: Translated: 643; Mature: 643

Protein sequence:

>643_residues
MRRLAFPLALVLALSAMPGRSQSQLKISGPQFPQPTEAECDQDWAGMRQELEKALEKTPKHEIAGGYHALGQALESCQKY
DEAIAAFERGKTLQSWHAQYKFDIARVRIRQQKLTQALNIYRQYHQSESKQLSAKEIDGLAYNDLGENLVSVGELDRAIA
TFDYATRLTPKNAAIWRNLGKTQVKAQKYDPAIQSFRQAVLIKESASLTDRQLDARAYLQVGHYLTSTQKVKEGVPFLEN
AIALDPQYSDAYLVLGQNYAQQRRWDEAITNYTQRLKLSPKSVYTHTLMGDALIRKQDFEGAFTQYRQFLGSNATKPDAE
LDADAYKWLAKALKKLNRLGPAVEAYQKIAALQPKNAHVLNEMGVVLTTLERWEEAIVVLRKAQDVFQANQAEQSAPFGS
DMIVINLGGALAGNGQVEEALTVLRPVVQDSPENPFIRMTLGKVLLQAGQKQEARQLLQTGLKKVSFPLAFVGIETTPNA
KLETVLGQLYFELKQYDLALAHYQKAVQIDPDFAVGHFAVGNILRRQGKSDQAIPAYEKALKLQPRNLFFTHQFYSGRGL
ALLAQGKEAAAIADFERATQLNAINVEALHGLGKALLQQNKPSAAIPHLEAAYDLNPGYPQVAEDLRLAKSQTSVESNPP
QTE

Sequences:

>Translated_643_residues
MRRLAFPLALVLALSAMPGRSQSQLKISGPQFPQPTEAECDQDWAGMRQELEKALEKTPKHEIAGGYHALGQALESCQKY
DEAIAAFERGKTLQSWHAQYKFDIARVRIRQQKLTQALNIYRQYHQSESKQLSAKEIDGLAYNDLGENLVSVGELDRAIA
TFDYATRLTPKNAAIWRNLGKTQVKAQKYDPAIQSFRQAVLIKESASLTDRQLDARAYLQVGHYLTSTQKVKEGVPFLEN
AIALDPQYSDAYLVLGQNYAQQRRWDEAITNYTQRLKLSPKSVYTHTLMGDALIRKQDFEGAFTQYRQFLGSNATKPDAE
LDADAYKWLAKALKKLNRLGPAVEAYQKIAALQPKNAHVLNEMGVVLTTLERWEEAIVVLRKAQDVFQANQAEQSAPFGS
DMIVINLGGALAGNGQVEEALTVLRPVVQDSPENPFIRMTLGKVLLQAGQKQEARQLLQTGLKKVSFPLAFVGIETTPNA
KLETVLGQLYFELKQYDLALAHYQKAVQIDPDFAVGHFAVGNILRRQGKSDQAIPAYEKALKLQPRNLFFTHQFYSGRGL
ALLAQGKEAAAIADFERATQLNAINVEALHGLGKALLQQNKPSAAIPHLEAAYDLNPGYPQVAEDLRLAKSQTSVESNPP
QTE
>Mature_643_residues
MRRLAFPLALVLALSAMPGRSQSQLKISGPQFPQPTEAECDQDWAGMRQELEKALEKTPKHEIAGGYHALGQALESCQKY
DEAIAAFERGKTLQSWHAQYKFDIARVRIRQQKLTQALNIYRQYHQSESKQLSAKEIDGLAYNDLGENLVSVGELDRAIA
TFDYATRLTPKNAAIWRNLGKTQVKAQKYDPAIQSFRQAVLIKESASLTDRQLDARAYLQVGHYLTSTQKVKEGVPFLEN
AIALDPQYSDAYLVLGQNYAQQRRWDEAITNYTQRLKLSPKSVYTHTLMGDALIRKQDFEGAFTQYRQFLGSNATKPDAE
LDADAYKWLAKALKKLNRLGPAVEAYQKIAALQPKNAHVLNEMGVVLTTLERWEEAIVVLRKAQDVFQANQAEQSAPFGS
DMIVINLGGALAGNGQVEEALTVLRPVVQDSPENPFIRMTLGKVLLQAGQKQEARQLLQTGLKKVSFPLAFVGIETTPNA
KLETVLGQLYFELKQYDLALAHYQKAVQIDPDFAVGHFAVGNILRRQGKSDQAIPAYEKALKLQPRNLFFTHQFYSGRGL
ALLAQGKEAAAIADFERATQLNAINVEALHGLGKALLQQNKPSAAIPHLEAAYDLNPGYPQVAEDLRLAKSQTSVESNPP
QTE

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=443, Percent_Identity=23.4762979683973, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI32307150, Length=443, Percent_Identity=23.4762979683973, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI83415184, Length=405, Percent_Identity=25.679012345679, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI301336134, Length=438, Percent_Identity=24.4292237442922, Blast_Score=74, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115532690, Length=427, Percent_Identity=25.0585480093677, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI115532692, Length=411, Percent_Identity=25.7907542579075, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI17647755, Length=431, Percent_Identity=23.8979118329466, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24585827, Length=431, Percent_Identity=23.8979118329466, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24585829, Length=431, Percent_Identity=23.8979118329466, Blast_Score=92, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71586; Mature: 71586

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLAFPLALVLALSAMPGRSQSQLKISGPQFPQPTEAECDQDWAGMRQELEKALEKTPK
CCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
HEIAGGYHALGQALESCQKYDEAIAAFERGKTLQSWHAQYKFDIARVRIRQQKLTQALNI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRQYHQSESKQLSAKEIDGLAYNDLGENLVSVGELDRAIATFDYATRLTPKNAAIWRNLG
HHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
KTQVKAQKYDPAIQSFRQAVLIKESASLTDRQLDARAYLQVGHYLTSTQKVKEGVPFLEN
HHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AIALDPQYSDAYLVLGQNYAQQRRWDEAITNYTQRLKLSPKSVYTHTLMGDALIRKQDFE
HEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
GAFTQYRQFLGSNATKPDAELDADAYKWLAKALKKLNRLGPAVEAYQKIAALQPKNAHVL
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHH
NEMGVVLTTLERWEEAIVVLRKAQDVFQANQAEQSAPFGSDMIVINLGGALAGNGQVEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHH
LTVLRPVVQDSPENPFIRMTLGKVLLQAGQKQEARQLLQTGLKKVSFPLAFVGIETTPNA
HHHHHHHHHCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCH
KLETVLGQLYFELKQYDLALAHYQKAVQIDPDFAVGHFAVGNILRRQGKSDQAIPAYEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
LKLQPRNLFFTHQFYSGRGLALLAQGKEAAAIADFERATQLNAINVEALHGLGKALLQQN
HHCCCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
KPSAAIPHLEAAYDLNPGYPQVAEDLRLAKSQTSVESNPPQTE
CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRRLAFPLALVLALSAMPGRSQSQLKISGPQFPQPTEAECDQDWAGMRQELEKALEKTPK
CCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
HEIAGGYHALGQALESCQKYDEAIAAFERGKTLQSWHAQYKFDIARVRIRQQKLTQALNI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRQYHQSESKQLSAKEIDGLAYNDLGENLVSVGELDRAIATFDYATRLTPKNAAIWRNLG
HHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
KTQVKAQKYDPAIQSFRQAVLIKESASLTDRQLDARAYLQVGHYLTSTQKVKEGVPFLEN
HHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AIALDPQYSDAYLVLGQNYAQQRRWDEAITNYTQRLKLSPKSVYTHTLMGDALIRKQDFE
HEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
GAFTQYRQFLGSNATKPDAELDADAYKWLAKALKKLNRLGPAVEAYQKIAALQPKNAHVL
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHH
NEMGVVLTTLERWEEAIVVLRKAQDVFQANQAEQSAPFGSDMIVINLGGALAGNGQVEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHH
LTVLRPVVQDSPENPFIRMTLGKVLLQAGQKQEARQLLQTGLKKVSFPLAFVGIETTPNA
HHHHHHHHHCCCCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCH
KLETVLGQLYFELKQYDLALAHYQKAVQIDPDFAVGHFAVGNILRRQGKSDQAIPAYEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
LKLQPRNLFFTHQFYSGRGLALLAQGKEAAAIADFERATQLNAINVEALHGLGKALLQQN
HHCCCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
KPSAAIPHLEAAYDLNPGYPQVAEDLRLAKSQTSVESNPPQTE
CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA