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The map label for this gene is 158337789

Identifier: 158337789

GI number: 158337789

Start: 4706490

End: 4707254

Strand: Reverse

Name: 158337789

Synonym: AM1_4673

Alternate gene names: NA

Gene position: 4707254-4706490 (Counterclockwise)

Preceding gene: 158337791

Following gene: 158337788

Centisome position: 72.38

GC content: 52.03

Gene sequence:

>765_bases
TTGATTGATGCCATTGGAGAGTTGAATCCCTGGCTCCTCGCTGCCTTGTTAAATACAGGGTTAGGCTTGGTGGGCTGGAA
ACTCGTCTCCAAGCTTTTAACACCTACAGGATTAGTCCATGCCTGGATTTTAGGGGTAATCGTCTGGGGTGTTTTGGGTT
GGCCAGGCTATGGGGTCGTTCTATTCTACTTTTTGGCTGGATCCGCTGTAACGAAAATCGGCATGGCGGAAAAAGAAGCC
GCTGGTATTGCAGAGAAACGGTCTGGGGCTAGAGGCCCTGAGAATGTTTGGGGGTCTGCCGCCAGCTCAACCCTATGTGC
TCTGGCTACCTTAGTGGTTCCCCTACCCTACCGGCCTTTGCTGTGCCTGGGTTATGTGAGCGGTTTTAGTACGAAGCTTT
CTGATACAACGGCCAGTGAAATTGGCAAAGCCTATGGCAATCGCACCTTTCTGATTACAACCTTGCGGCTCGTGCCCCGG
GGAACCGAGGGGGCCGTTAGTTTAGAAGGGACCGTCGCCGGTATGCTAGCTTCGGTCGTGATTGCTCTTTTGGCTTGGGC
AGTAGGCTTAATCGACTGGATTGGCGTGGTCTGGTGCGTAATTGCGGCTTTTATTGCGACTAATTTAGAAAGTGTGATTG
GAGCCACGGTGCAATCACAGTTCAAGTGGCTGACCAATGAAGTGGTGAATGGGATTAATACGTTGATTGGATCAGTCGCT
GCCATGGGGATGGCCCTCGCTTGGGCAGGACTGCTAGTACGGTAA

Upstream 100 bases:

>100_bases
GTCTCTGGGATGTTCGTGACAGGAAAAGCCAGGTGGAATAGGATGAAGTCAGTGGTGGGCGGTTGTGTATCCATAGTTTC
AATAGTTCCCAAAAATGACT

Downstream 100 bases:

>100_bases
CGCATTCCTCCTCATAGATGTGTAGGGGAAGAAAATGCGATAGGATGATGCATCAATAACATACGGAGGCCAAAAAAGGA
TGGCTTCAAAATCTGGGATC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MIDAIGELNPWLLAALLNTGLGLVGWKLVSKLLTPTGLVHAWILGVIVWGVLGWPGYGVVLFYFLAGSAVTKIGMAEKEA
AGIAEKRSGARGPENVWGSAASSTLCALATLVVPLPYRPLLCLGYVSGFSTKLSDTTASEIGKAYGNRTFLITTLRLVPR
GTEGAVSLEGTVAGMLASVVIALLAWAVGLIDWIGVVWCVIAAFIATNLESVIGATVQSQFKWLTNEVVNGINTLIGSVA
AMGMALAWAGLLVR

Sequences:

>Translated_254_residues
MIDAIGELNPWLLAALLNTGLGLVGWKLVSKLLTPTGLVHAWILGVIVWGVLGWPGYGVVLFYFLAGSAVTKIGMAEKEA
AGIAEKRSGARGPENVWGSAASSTLCALATLVVPLPYRPLLCLGYVSGFSTKLSDTTASEIGKAYGNRTFLITTLRLVPR
GTEGAVSLEGTVAGMLASVVIALLAWAVGLIDWIGVVWCVIAAFIATNLESVIGATVQSQFKWLTNEVVNGINTLIGSVA
AMGMALAWAGLLVR
>Mature_254_residues
MIDAIGELNPWLLAALLNTGLGLVGWKLVSKLLTPTGLVHAWILGVIVWGVLGWPGYGVVLFYFLAGSAVTKIGMAEKEA
AGIAEKRSGARGPENVWGSAASSTLCALATLVVPLPYRPLLCLGYVSGFSTKLSDTTASEIGKAYGNRTFLITTLRLVPR
GTEGAVSLEGTVAGMLASVVIALLAWAVGLIDWIGVVWCVIAAFIATNLESVIGATVQSQFKWLTNEVVNGINTLIGSVA
AMGMALAWAGLLVR

Specific function: Unknown

COG id: COG1836

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM19 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002794 [H]

Pfam domain/function: PF01940 DUF92 [H]

EC number: NA

Molecular weight: Translated: 26512; Mature: 26512

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDAIGELNPWLLAALLNTGLGLVGWKLVSKLLTPTGLVHAWILGVIVWGVLGWPGYGVV
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHH
LFYFLAGSAVTKIGMAEKEAAGIAEKRSGARGPENVWGSAASSTLCALATLVVPLPYRPL
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHH
LCLGYVSGFSTKLSDTTASEIGKAYGNRTFLITTLRLVPRGTEGAVSLEGTVAGMLASVV
HHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCEEEHHHHHHHHHHHH
IALLAWAVGLIDWIGVVWCVIAAFIATNLESVIGATVQSQFKWLTNEVVNGINTLIGSVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMGMALAWAGLLVR
HHHHHHHHHHHHCC
>Mature Secondary Structure
MIDAIGELNPWLLAALLNTGLGLVGWKLVSKLLTPTGLVHAWILGVIVWGVLGWPGYGVV
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHH
LFYFLAGSAVTKIGMAEKEAAGIAEKRSGARGPENVWGSAASSTLCALATLVVPLPYRPL
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHH
LCLGYVSGFSTKLSDTTASEIGKAYGNRTFLITTLRLVPRGTEGAVSLEGTVAGMLASVV
HHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCEEEHHHHHHHHHHHH
IALLAWAVGLIDWIGVVWCVIAAFIATNLESVIGATVQSQFKWLTNEVVNGINTLIGSVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMGMALAWAGLLVR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]