| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337719
Identifier: 158337719
GI number: 158337719
Start: 4635843
End: 4636568
Strand: Direct
Name: 158337719
Synonym: AM1_4603
Alternate gene names: NA
Gene position: 4635843-4636568 (Clockwise)
Preceding gene: 158337718
Following gene: 158337720
Centisome position: 71.28
GC content: 46.01
Gene sequence:
>726_bases ATGCACACTCGTCTAATACTTTGTGCATCAGTTGTGAGTTTGTGCGCAATTTCTTCCCAGTCTGCGCTTGCCCAAACCAC CACAAACAATATCGATGCACCTAATAATGCAACTTCAACAGCTAATCCGGCGGTAGATTTGAACCAGCAAGGTTCATTAG TCAATACTCAAGTCAATACCCATCCATTAGGACGCAGCATTGTCGGTCGAGGGGTCGCAGATTGCACGAGTAATGGCATT GCTGTTTCTGCTTTTGGAAACGGGATTGGGCCTTTTGACACAGGTACGCTGGGCGGTTCGTTTACCTATACCCATTCTTT TGGGATGGCAACCTGTAACGAATATGCTCAAACTCAACTTTCCAAATCAAAACTGGAAAACTGCTTGTTGCTCATTAGCA ACTATTCCAAGATGGTCAAAGCTGGCGTCAAAGTCAGTTACCAAGCATTAAAAGCTATTGGTGGTGTTGATTGTCCACCT GTAGTTGTTCAAAGTGCAGTGGCCCCAGCAAATGGTCCCCTAGGTCGTAATGCTGTTCCTCCGCATCAAAACCAATCCCA ACCTGTTGTGAGTCAACAGAACCAGTTACAGCGCCAGCAGCAACAGATTACGCCGAATCGCCATCAGGTTCAGCAGCGGC AAAATATACCTCAACATCAACAAAAACCTCATCACTCAATTCCATCAACTCCAGTGGCTTCTTCGCAACCAGCACCTGCA TATTAA
Upstream 100 bases:
>100_bases AGGATCACAGAGTCACCAGTGGTTTCTCGTTCTAACTGAATTTAGTTAGTTCCTTGGGGCAACACATCGTTGCCCCTCTG TTATTCAGGAGAAAACACTC
Downstream 100 bases:
>100_bases AGATAGCAGCGGTGATTATTTTGCAATTGTCAATACTCTCATTGATGATGTAGCAAGCTAGCGATTGTTGCTGAATTTTG TATGTAAAAAATGTGAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MHTRLILCASVVSLCAISSQSALAQTTTNNIDAPNNATSTANPAVDLNQQGSLVNTQVNTHPLGRSIVGRGVADCTSNGI AVSAFGNGIGPFDTGTLGGSFTYTHSFGMATCNEYAQTQLSKSKLENCLLLISNYSKMVKAGVKVSYQALKAIGGVDCPP VVVQSAVAPANGPLGRNAVPPHQNQSQPVVSQQNQLQRQQQQITPNRHQVQQRQNIPQHQQKPHHSIPSTPVASSQPAPA Y
Sequences:
>Translated_241_residues MHTRLILCASVVSLCAISSQSALAQTTTNNIDAPNNATSTANPAVDLNQQGSLVNTQVNTHPLGRSIVGRGVADCTSNGI AVSAFGNGIGPFDTGTLGGSFTYTHSFGMATCNEYAQTQLSKSKLENCLLLISNYSKMVKAGVKVSYQALKAIGGVDCPP VVVQSAVAPANGPLGRNAVPPHQNQSQPVVSQQNQLQRQQQQITPNRHQVQQRQNIPQHQQKPHHSIPSTPVASSQPAPA Y >Mature_241_residues MHTRLILCASVVSLCAISSQSALAQTTTNNIDAPNNATSTANPAVDLNQQGSLVNTQVNTHPLGRSIVGRGVADCTSNGI AVSAFGNGIGPFDTGTLGGSFTYTHSFGMATCNEYAQTQLSKSKLENCLLLISNYSKMVKAGVKVSYQALKAIGGVDCPP VVVQSAVAPANGPLGRNAVPPHQNQSQPVVSQQNQLQRQQQQITPNRHQVQQRQNIPQHQQKPHHSIPSTPVASSQPAPA Y
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25411; Mature: 25411
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTRLILCASVVSLCAISSQSALAQTTTNNIDAPNNATSTANPAVDLNQQGSLVNTQVNT CCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC HPLGRSIVGRGVADCTSNGIAVSAFGNGIGPFDTGTLGGSFTYTHSFGMATCNEYAQTQL CCCCHHHHHCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH SKSKLENCLLLISNYSKMVKAGVKVSYQALKAIGGVDCPPVVVQSAVAPANGPLGRNAVP HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCC PHQNQSQPVVSQQNQLQRQQQQITPNRHQVQQRQNIPQHQQKPHHSIPSTPVASSQPAPA CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCC Y C >Mature Secondary Structure MHTRLILCASVVSLCAISSQSALAQTTTNNIDAPNNATSTANPAVDLNQQGSLVNTQVNT CCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC HPLGRSIVGRGVADCTSNGIAVSAFGNGIGPFDTGTLGGSFTYTHSFGMATCNEYAQTQL CCCCHHHHHCCHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH SKSKLENCLLLISNYSKMVKAGVKVSYQALKAIGGVDCPPVVVQSAVAPANGPLGRNAVP HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCC PHQNQSQPVVSQQNQLQRQQQQITPNRHQVQQRQNIPQHQQKPHHSIPSTPVASSQPAPA CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA