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The map label for this gene is 158337709

Identifier: 158337709

GI number: 158337709

Start: 4628957

End: 4629322

Strand: Reverse

Name: 158337709

Synonym: AM1_4593

Alternate gene names: NA

Gene position: 4629322-4628957 (Counterclockwise)

Preceding gene: 158337710

Following gene: 158337707

Centisome position: 71.18

GC content: 51.09

Gene sequence:

>366_bases
ATGCCCACTTTGATTGCCCAGCCGACGATTATCACTGCTGCAGGGAATAAACCCAAACGGATTGAAGAATTTTTTGGACG
GGTCAATTCCAAGCATGACCATATCAGCGTTGCCCGCATGGTATCGCCTGCAGGCTGGCAAGAACCTGGACAAAAGCCCG
AATTCCAAGAAATGACCGTTGTCCTGCAAGGACTATTGCGAGTTGAGTATGAGGGGGGTGTTTTGGACGTGCAGGCAGGG
CAAGCTATCGTTACAGAACCGGGGGAATGGATTCGGTATGGCACGCCGGATGGTGCAGAGTATATTGCAGTTTGCTTACC
CGCCTTTTCACCAGAGACGGTCCACCGGGATGTTGATGATATCTAA

Upstream 100 bases:

>100_bases
ATTCTGGTTTGCAGCGTGTGGACGCCCATCGGTTTTACCAGCGGGAGGGCCTGCAAATCAACAGCTATCATTTTTCCCTC
AAGCTCTAAAGGAGACTGTT

Downstream 100 bases:

>100_bases
ACGTTGCGGTTGCTCAAGGCCCGGCAGGTTATTCGATTCTGACAAAACCTGCTTTTTCAATGAGTTGCTGGCCCTGCTCG
CTCAACATCATGTCCGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MPTLIAQPTIITAAGNKPKRIEEFFGRVNSKHDHISVARMVSPAGWQEPGQKPEFQEMTVVLQGLLRVEYEGGVLDVQAG
QAIVTEPGEWIRYGTPDGAEYIAVCLPAFSPETVHRDVDDI

Sequences:

>Translated_121_residues
MPTLIAQPTIITAAGNKPKRIEEFFGRVNSKHDHISVARMVSPAGWQEPGQKPEFQEMTVVLQGLLRVEYEGGVLDVQAG
QAIVTEPGEWIRYGTPDGAEYIAVCLPAFSPETVHRDVDDI
>Mature_120_residues
PTLIAQPTIITAAGNKPKRIEEFFGRVNSKHDHISVARMVSPAGWQEPGQKPEFQEMTVVLQGLLRVEYEGGVLDVQAGQ
AIVTEPGEWIRYGTPDGAEYIAVCLPAFSPETVHRDVDDI

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR023091
- InterPro:   IPR014710
- InterPro:   IPR020549
- InterPro:   IPR002036 [H]

Pfam domain/function: PF07883 Cupin_2; PF02130 UPF0054 [H]

EC number: NA

Molecular weight: Translated: 13315; Mature: 13184

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLIAQPTIITAAGNKPKRIEEFFGRVNSKHDHISVARMVSPAGWQEPGQKPEFQEMTV
CCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHH
VLQGLLRVEYEGGVLDVQAGQAIVTEPGEWIRYGTPDGAEYIAVCLPAFSPETVHRDVDD
HHHHHHHEECCCCEEEECCCCEEEECCCCEEECCCCCCCCEEEEEECCCCCHHHCCCCCC
I
C
>Mature Secondary Structure 
PTLIAQPTIITAAGNKPKRIEEFFGRVNSKHDHISVARMVSPAGWQEPGQKPEFQEMTV
CCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHH
VLQGLLRVEYEGGVLDVQAGQAIVTEPGEWIRYGTPDGAEYIAVCLPAFSPETVHRDVDD
HHHHHHHEECCCCEEEECCCCEEEECCCCEEECCCCCCCCEEEEEECCCCCHHHCCCCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA