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The map label for this gene is ydaM [H]

Identifier: 158337692

GI number: 158337692

Start: 4612718

End: 4614091

Strand: Reverse

Name: ydaM [H]

Synonym: AM1_4576

Alternate gene names: 158337692

Gene position: 4614091-4612718 (Counterclockwise)

Preceding gene: 158337693

Following gene: 158337691

Centisome position: 70.95

GC content: 48.76

Gene sequence:

>1374_bases
GTGAAATCTCCATGGCCAGAAGACCCGGAACTCCCACAGCTTTCTGAGGTAGAAATTGATTATCCCGAAGGTGAAGGTCG
GCGACGCAAAGCGGCTTTGATGCTGGCCTTAATTTGGAGCTGTACGATTGCGTTGCATCTGTTTTCGGTTGGGTTTTGGG
CCGTTTGTGGTCTGACAACCGTTATTAGTATGCACTGGTTGCGAATGATTCGGGCGTCGGCACTGCCCACTGAAGAGCCA
TTAAACCTAGATAAACCTGAAACTGAATATCCCTTTGTATCCCTCTTAGTATCGGCAAAAAATGAAGAAGCAGTTCTAGG
ATCTTTGGTTAAAACCCTCTGCAAGCTAGACTATCCTGCCGAACGATATGAAGTTTGGATTGTAGATGACAATAGTACGG
ATAAGACCCCCGACGTACTGGCTCAATTGTCTGAAGAGTATGCGCAACTCCATGTGCTGCGCCGATCGGAAGAAGACGGT
GGTGGCAAATCCGGGGCCTTAAATCAGGTTTTGCCAATGACTCAAGGCGACATCATTGGGGTTTTTGATGCTGATGCTCA
GGTCTCTGCCGATTTACTCTGTCGAGTGTTACCCCTGTTTGATGATCCGCAAATGGGTGCCGTCCAGGTTCGTAAACAGA
TTGCGAACGCTGATACCAATTTTTGGACTCGAGGTCAGTCTGCTGAAATGGGTTTAGACCTGTATCTTCAACAGCAGCGG
ATTGCAGTGGGGGGGGTTGGCGAGCTGCGTGGTAATGGCCAATTTGTGCGTCGCCAGGCGTTGGCAAGTTGTGGGGGCTG
GAATGAAGCGACCATCACTGATGATTTGGATTTGACCTTCCGCTTACATCTAAATCATTGGGACATTGGCATATTGCCTG
TACCTGCGGTACGGGAAGAAGGAGTGACACGGGCTATAGCGCTTTGGCATCAACGGAATCGTTGGGCCGAAGGGGGGTAT
CAACGATATTTAGATTATTGGCCTTTAATTATTCGCAATCGTTTAGGACCCCGTAAAACCTTTGATTTAGTGGTGTTTTG
GTTTGCTCAATATGTTCTGCCCACTGCAGCTGTGCCTGACTTGGTGATGGCGACCGCTCGCAACCAGCTCCCACTACTAA
TGCCGATGACGAGTGTCACCATGTTGTTGTCGTTGGTTGGCATGTGGAATGGGTTAGACCGTATTCGTAAAGCTGAACAA
ATTGCCCCAACACCGCTGGTGATGTTCTTACAAACCGTAAGAGGGACGCTGTATACTTGCCATTGGTTTTTGGTGATGGC
TTGTGTCACGGCCAGGATGTCCATTCGACCCAAACGCTTGAAATGGGTAAAAACCCTGCGCCAAGATGACTATCAGATTT
ATGTGCCTGATTAG

Upstream 100 bases:

>100_bases
CCCAGCTTTTTCCAAGGTGTTGATAAATATTGGGTCTTGAACCAAGTCAGTTATGTCGGAGAATTCCTGGCCAGAAAACG
ATTCTTGCAGCATGTCTAAC

Downstream 100 bases:

>100_bases
GTAAAGTATACTGCGTACGACTTGCGGCTTAACATTGTAGTGGAGAGATTTGGCAGACTGGGAGTATCCCTCAACCGACT
CCCCTACTTGCATGATTAAA

Product: inner membrane glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MKSPWPEDPELPQLSEVEIDYPEGEGRRRKAALMLALIWSCTIALHLFSVGFWAVCGLTTVISMHWLRMIRASALPTEEP
LNLDKPETEYPFVSLLVSAKNEEAVLGSLVKTLCKLDYPAERYEVWIVDDNSTDKTPDVLAQLSEEYAQLHVLRRSEEDG
GGKSGALNQVLPMTQGDIIGVFDADAQVSADLLCRVLPLFDDPQMGAVQVRKQIANADTNFWTRGQSAEMGLDLYLQQQR
IAVGGVGELRGNGQFVRRQALASCGGWNEATITDDLDLTFRLHLNHWDIGILPVPAVREEGVTRAIALWHQRNRWAEGGY
QRYLDYWPLIIRNRLGPRKTFDLVVFWFAQYVLPTAAVPDLVMATARNQLPLLMPMTSVTMLLSLVGMWNGLDRIRKAEQ
IAPTPLVMFLQTVRGTLYTCHWFLVMACVTARMSIRPKRLKWVKTLRQDDYQIYVPD

Sequences:

>Translated_457_residues
MKSPWPEDPELPQLSEVEIDYPEGEGRRRKAALMLALIWSCTIALHLFSVGFWAVCGLTTVISMHWLRMIRASALPTEEP
LNLDKPETEYPFVSLLVSAKNEEAVLGSLVKTLCKLDYPAERYEVWIVDDNSTDKTPDVLAQLSEEYAQLHVLRRSEEDG
GGKSGALNQVLPMTQGDIIGVFDADAQVSADLLCRVLPLFDDPQMGAVQVRKQIANADTNFWTRGQSAEMGLDLYLQQQR
IAVGGVGELRGNGQFVRRQALASCGGWNEATITDDLDLTFRLHLNHWDIGILPVPAVREEGVTRAIALWHQRNRWAEGGY
QRYLDYWPLIIRNRLGPRKTFDLVVFWFAQYVLPTAAVPDLVMATARNQLPLLMPMTSVTMLLSLVGMWNGLDRIRKAEQ
IAPTPLVMFLQTVRGTLYTCHWFLVMACVTARMSIRPKRLKWVKTLRQDDYQIYVPD
>Mature_457_residues
MKSPWPEDPELPQLSEVEIDYPEGEGRRRKAALMLALIWSCTIALHLFSVGFWAVCGLTTVISMHWLRMIRASALPTEEP
LNLDKPETEYPFVSLLVSAKNEEAVLGSLVKTLCKLDYPAERYEVWIVDDNSTDKTPDVLAQLSEEYAQLHVLRRSEEDG
GGKSGALNQVLPMTQGDIIGVFDADAQVSADLLCRVLPLFDDPQMGAVQVRKQIANADTNFWTRGQSAEMGLDLYLQQQR
IAVGGVGELRGNGQFVRRQALASCGGWNEATITDDLDLTFRLHLNHWDIGILPVPAVREEGVTRAIALWHQRNRWAEGGY
QRYLDYWPLIIRNRLGPRKTFDLVVFWFAQYVLPTAAVPDLVMATARNQLPLLMPMTSVTMLLSLVGMWNGLDRIRKAEQ
IAPTPLVMFLQTVRGTLYTCHWFLVMACVTARMSIRPKRLKWVKTLRQDDYQIYVPD

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=284, Percent_Identity=28.5211267605634, Blast_Score=92, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 51756; Mature: 51756

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPWPEDPELPQLSEVEIDYPEGEGRRRKAALMLALIWSCTIALHLFSVGFWAVCGLTT
CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISMHWLRMIRASALPTEEPLNLDKPETEYPFVSLLVSAKNEEAVLGSLVKTLCKLDYPA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCC
ERYEVWIVDDNSTDKTPDVLAQLSEEYAQLHVLRRSEEDGGGKSGALNQVLPMTQGDIIG
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCEEE
VFDADAQVSADLLCRVLPLFDDPQMGAVQVRKQIANADTNFWTRGQSAEMGLDLYLQQQR
EECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCHHEEEEHHH
IAVGGVGELRGNGQFVRRQALASCGGWNEATITDDLDLTFRLHLNHWDIGILPVPAVREE
HEECCCHHCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCCCCCEECCCCHHHC
GVTRAIALWHQRNRWAEGGYQRYLDYWPLIIRNRLGPRKTFDLVVFWFAQYVLPTAAVPD
CHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHH
LVMATARNQLPLLMPMTSVTMLLSLVGMWNGLDRIRKAEQIAPTPLVMFLQTVRGTLYTC
HHHHHHCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HWFLVMACVTARMSIRPKRLKWVKTLRQDDYQIYVPD
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCC
>Mature Secondary Structure
MKSPWPEDPELPQLSEVEIDYPEGEGRRRKAALMLALIWSCTIALHLFSVGFWAVCGLTT
CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VISMHWLRMIRASALPTEEPLNLDKPETEYPFVSLLVSAKNEEAVLGSLVKTLCKLDYPA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCC
ERYEVWIVDDNSTDKTPDVLAQLSEEYAQLHVLRRSEEDGGGKSGALNQVLPMTQGDIIG
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCEEE
VFDADAQVSADLLCRVLPLFDDPQMGAVQVRKQIANADTNFWTRGQSAEMGLDLYLQQQR
EECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCHHEEEEHHH
IAVGGVGELRGNGQFVRRQALASCGGWNEATITDDLDLTFRLHLNHWDIGILPVPAVREE
HEECCCHHCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEECCCCCCEECCCCHHHC
GVTRAIALWHQRNRWAEGGYQRYLDYWPLIIRNRLGPRKTFDLVVFWFAQYVLPTAAVPD
CHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHH
LVMATARNQLPLLMPMTSVTMLLSLVGMWNGLDRIRKAEQIAPTPLVMFLQTVRGTLYTC
HHHHHHCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HWFLVMACVTARMSIRPKRLKWVKTLRQDDYQIYVPD
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]