| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is hppD [H]
Identifier: 158337667
GI number: 158337667
Start: 4586469
End: 4587536
Strand: Direct
Name: hppD [H]
Synonym: AM1_4550
Alternate gene names: 158337667
Gene position: 4586469-4587536 (Clockwise)
Preceding gene: 158337666
Following gene: 158337670
Centisome position: 70.52
GC content: 45.97
Gene sequence:
>1068_bases ATGGATTTTGATCATATTCATTTTTATGTTCATGATTCCAAGCAATGCCAGCGTTGGTTTACTAACGTTTTAGGATTTCA ATATCTTGGGAGCAATACTACGGCTGATCGGCAGATTGAAGTTGTCTCTTCTGGGGCGATTGTCTGTATATTTTCCAGCC CTCTAAACCGAACCAGCCCAGTTGCCCAGTATCTACAACAACACCCTCCTGGTGTCGTTGATTTGGCTTTCTTGGTCCCG GACGTTCAGGCTACGCTTACCTGCGCTGTCCAGTCAGGAGCAACCCTTTTACAACCTTTGACCGAAGAAAAAAACGACCA AGGAACGTTAACTTGGGGAAAAGTACGAGGGTGGGGAGCGTTAGAACATACCTTGGTAGAGCGAAGAGGGCAAACCTCCA CTCTGCCATCCAGCATTTTTCCCATCTCAATTCATGGGCATGATGCCCATCAGAGTCTATTTACCCAGATTGATCATGGG GTTTTGAATGTGGGTAAGCATCAGCTGCAAGCTGCTGTGAGTTGGTATCAGCGCATATTTGGATTTAAAACTCACCGATA TTTTGATATTCAAACGCGTCGTTCAGGTCTGCGCAGTGAAGTGTTGACCCATCCCCAAGGCCAAATCAAGTTTCCGATCA ATGAACCCACCTCAGCGAATTCCCAAATCCAAGAATTTCTAGAGGTCAATCGGGGGGCAGGTATTCAACATATCGCATTG GGAACTTCTAATATTGTTGAAACGGTTACTCAGCTTAAGCATCGAGGGCTATCCATCCTAGATATTCCACCCAGCTACTA TCAACGCTTACGACACCAGTTTGAGCAAGTCTATTCCCACCTCGATTGGCATGCCCTGGAAACACAACATATTCTGGCTG ATTTTGAGGAAGATGCTGGAGCCGGAATTCTATTGCAAACCTTCACAAAGCCTATCTTTCCACAACCCACTTTTTTCTTT GAAATTATTGAGCGCCAACGGCAGGCCCAAGGGTTCGGACAACGAAACTTTTTGGCCCTTTTTCAAGCCATGGAGCGGGA ACAACAGAAACGGGGAGTATTGCTATAG
Upstream 100 bases:
>100_bases GTAAACTTCTCAACATGTTGCTGTGCATCTCAGTCTAGAGGGGCCAGCAGCCTCCCAAATTACGTTTTCAACGTCAATTC AAGATCGGTATTTGTGATCT
Downstream 100 bases:
>100_bases GCTCATCTCAGTTTGCTGCATCCTGCAAAAAATATGCATGAAACATCACCTCTGCAATCCCTTCCGTCTGACTATTATGC CCGGTGGACATTGCTCGATA
Product: 4-hydroxyphenylpyruvate dioxygenase
Products: NA
Alternate protein names: 4HPPD; HPD; HPPDase [H]
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MDFDHIHFYVHDSKQCQRWFTNVLGFQYLGSNTTADRQIEVVSSGAIVCIFSSPLNRTSPVAQYLQQHPPGVVDLAFLVP DVQATLTCAVQSGATLLQPLTEEKNDQGTLTWGKVRGWGALEHTLVERRGQTSTLPSSIFPISIHGHDAHQSLFTQIDHG VLNVGKHQLQAAVSWYQRIFGFKTHRYFDIQTRRSGLRSEVLTHPQGQIKFPINEPTSANSQIQEFLEVNRGAGIQHIAL GTSNIVETVTQLKHRGLSILDIPPSYYQRLRHQFEQVYSHLDWHALETQHILADFEEDAGAGILLQTFTKPIFPQPTFFF EIIERQRQAQGFGQRNFLALFQAMEREQQKRGVLL
Sequences:
>Translated_355_residues MDFDHIHFYVHDSKQCQRWFTNVLGFQYLGSNTTADRQIEVVSSGAIVCIFSSPLNRTSPVAQYLQQHPPGVVDLAFLVP DVQATLTCAVQSGATLLQPLTEEKNDQGTLTWGKVRGWGALEHTLVERRGQTSTLPSSIFPISIHGHDAHQSLFTQIDHG VLNVGKHQLQAAVSWYQRIFGFKTHRYFDIQTRRSGLRSEVLTHPQGQIKFPINEPTSANSQIQEFLEVNRGAGIQHIAL GTSNIVETVTQLKHRGLSILDIPPSYYQRLRHQFEQVYSHLDWHALETQHILADFEEDAGAGILLQTFTKPIFPQPTFFF EIIERQRQAQGFGQRNFLALFQAMEREQQKRGVLL >Mature_355_residues MDFDHIHFYVHDSKQCQRWFTNVLGFQYLGSNTTADRQIEVVSSGAIVCIFSSPLNRTSPVAQYLQQHPPGVVDLAFLVP DVQATLTCAVQSGATLLQPLTEEKNDQGTLTWGKVRGWGALEHTLVERRGQTSTLPSSIFPISIHGHDAHQSLFTQIDHG VLNVGKHQLQAAVSWYQRIFGFKTHRYFDIQTRRSGLRSEVLTHPQGQIKFPINEPTSANSQIQEFLEVNRGAGIQHIAL GTSNIVETVTQLKHRGLSILDIPPSYYQRLRHQFEQVYSHLDWHALETQHILADFEEDAGAGILLQTFTKPIFPQPTFFF EIIERQRQAQGFGQRNFLALFQAMEREQQKRGVLL
Specific function: Unknown
COG id: COG3185
COG function: function code ER; 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
Gene ontology:
GO:0003868: 4-hydroxyphenylpyruvate dioxygenase
GO:0009072: 4-hydroxyphenylpyruvate dioxygenase
GO:0016701: 4-hydroxyphenylpyruvate dioxygenase
GO:0016702: 4-hydroxyphenylpyruvate dioxygenase
GO:0046872: 4-hydroxyphenylpyruvate dioxygenase
GO:0055114: 4-hydroxyphenylpyruvate dioxygenase
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4HPPD family [H]
Homologues:
Organism=Homo sapiens, GI4504477, Length=373, Percent_Identity=34.5844504021448, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI285002264, Length=350, Percent_Identity=35.4285714285714, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI14249394, Length=366, Percent_Identity=27.3224043715847, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17555220, Length=381, Percent_Identity=36.745406824147, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17550752, Length=369, Percent_Identity=28.7262872628726, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24667510, Length=372, Percent_Identity=38.7096774193548, Blast_Score=218, Evalue=4e-57, Organism=Drosophila melanogaster, GI21356105, Length=301, Percent_Identity=40.531561461794, Blast_Score=193, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005956 - InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.27 [H]
Molecular weight: Translated: 40322; Mature: 40322
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFDHIHFYVHDSKQCQRWFTNVLGFQYLGSNTTADRQIEVVSSGAIVCIFSSPLNRTSP CCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCCCCCHH VAQYLQQHPPGVVDLAFLVPDVQATLTCAVQSGATLLQPLTEEKNDQGTLTWGKVRGWGA HHHHHHHCCCCEEEHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCCCCCH LEHTLVERRGQTSTLPSSIFPISIHGHDAHQSLFTQIDHGVLNVGKHQLQAAVSWYQRIF HHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFKTHRYFDIQTRRSGLRSEVLTHPQGQIKFPINEPTSANSQIQEFLEVNRGAGIQHIAL CCCCCEEEEHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEC GTSNIVETVTQLKHRGLSILDIPPSYYQRLRHQFEQVYSHLDWHALETQHILADFEEDAG CCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC AGILLQTFTKPIFPQPTFFFEIIERQRQAQGFGQRNFLALFQAMEREQQKRGVLL CEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDFDHIHFYVHDSKQCQRWFTNVLGFQYLGSNTTADRQIEVVSSGAIVCIFSSPLNRTSP CCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCCCCCCHH VAQYLQQHPPGVVDLAFLVPDVQATLTCAVQSGATLLQPLTEEKNDQGTLTWGKVRGWGA HHHHHHHCCCCEEEHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCCCCCCH LEHTLVERRGQTSTLPSSIFPISIHGHDAHQSLFTQIDHGVLNVGKHQLQAAVSWYQRIF HHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFKTHRYFDIQTRRSGLRSEVLTHPQGQIKFPINEPTSANSQIQEFLEVNRGAGIQHIAL CCCCCEEEEHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEC GTSNIVETVTQLKHRGLSILDIPPSYYQRLRHQFEQVYSHLDWHALETQHILADFEEDAG CCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC AGILLQTFTKPIFPQPTFFFEIIERQRQAQGFGQRNFLALFQAMEREQQKRGVLL CEEEHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8071207; 11572948; 12692562 [H]