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The map label for this gene is 158337643

Identifier: 158337643

GI number: 158337643

Start: 4550573

End: 4552216

Strand: Reverse

Name: 158337643

Synonym: AM1_4525

Alternate gene names: NA

Gene position: 4552216-4550573 (Counterclockwise)

Preceding gene: 158337644

Following gene: 158337642

Centisome position: 69.99

GC content: 52.31

Gene sequence:

>1644_bases
ATGGAGTTTAACTACAACTACAAGCGGAATAGCAGGGTATCGGGACAGGGCAATCAAGCCCAAATGTCCTTCTCCCCGGA
TTTGACCCGCGAACCGACCTATTTTCGGGGGCACTTGCGGCAAAATATTGCCTTTCGCGAAGCCATTAGTGCCCTTCATG
ATGTGGTGGTCTCTGACTTGCGATTTCAGCCCCAAGATAAAACCGCCTACAAAGCTTGGGCAGCGCAACGGGATGAGATT
GATTGGCAATTAGTAGCGGCTCAACGCCAAGAAGTCACCCACAAACTCCAAGCCCTCCAATCGGAACTCACAGACCTACA
CCACCGCAGTTCAAGTCGGTTAGCCCCCTTCTATCGGGCCAGACAACAATATTTTGACTACCTCTATCGCAGAGACTACG
ATGCCTGGTTTGTCCTCGACCCCGTCATTACGGTCCACCCAGATGAGGTGTTCTTTGAGTGTTTTAGTCAGGATGAGTCC
AGCTACGGTCGCTTAGGGGCCAGCTATAACGTCTTTGATCAGGTCAATGAGTTTGCCTGTGGCACCACCAATGTTGACTA
CTCCGCAGCACTATACGACGAATTTCAAAAAATCCGCAGCTATCGGCAAACCCTCTTAGAAGTTGATCCATCTGGCTTTG
AAGTCGAGACCACAGGCATGGCGGCCTACAAAGAGGTCAAAATCGATTTGCCCGACACTTGGGTGCGAGGCTTTTTGCAA
GTCAGTTCGGCCATGGCTCTACCCGCCATTCAGTTCGACCTGCATCCGATGGATATTTACAACCTTTGTTTTGCCCTCCG
CCGTCGTCGAGAAAAGCATGGCCCGCGCAGCCTCCGCTATCACCTTACCCCCGGAGAACCAATTCGCATGGTCCTTGAGC
CCTGGGACCAAGAGATCGTCTGTGCCCGCTCTATTTATCAGGGGAGTAAACCAGAAATGGTCAGGGTTTGGGGGCGACGA
CGATTGCTGACTTTAGAGCGTTTGATTCCTGTCGCCCGGAAGTTTACGGTGCATCTGTTGGGAACAGGACTGCCCTCGTT
TTATGTGGCTGATCTCAACGATATGTCCTTCACGTTAGGGCTATCGGGATGGACGGCCAATGACTGGTCACGGGCAGGCA
ATTTCGACCTAATGGCCCCCCGCGCCCAAGTGGATGATTGGACCAAGCGCCAGGTCTTTGAAGCATTGAAGCAAAATTGG
GTGGAGGCTCCTGCTACTCTGGCTAAACGCTTGGGGTTGGATCAATCGATAGTGTTAGGAGCACTCAGTGCCTATACCCA
AGCGGGACGAGCCATCTATGATCTCAACCAGCAGGTCTATCGGGTAAGAGAACTCGCCCGCGATCCACTCCCCATGGATA
AACTGCGCTTTAGCAATGAACGGGAAGCCCAAGCCACGCGATTCCTGGATCAAAATGCGGTGCGGGTCAGTCAGTCTTCG
GTGGATGGGAAGGGCACCCTGCTGTTACAGGGAACGGTTCAGCATCGGGATAAGACATTTCAGCCGATTGTGGCCATTGA
TCGAGATGAACGAATGGTTCACGGCGAATGTACGTGTAATTGGCATCAGCAAAATAAGCTTTTCAAAGGCCCCTGTGAGC
ATATTCTGGCTCTGCGCATGCAGCACAATCGGGCCACTTCTTAA

Upstream 100 bases:

>100_bases
CCCCAGATCTCAGTACCCTTGCAAGTCAAGCCAGTTGCTGTGCGAGAGCCTGCTGCCTTGTCCTAAATCATTGAGCCGTC
TATTAGCCGAGAGAGTTTGC

Downstream 100 bases:

>100_bases
AACCTGCATCTATTCCTTATTGACCGCAGCCACTCTGCCTGAATGTGGGTTTTGGAGCTGCATTCATGTTTTATCACTAC
TGCCTATTGCTGTTAGACAA

Product: SWIM zinc finger domain-containing protein

Products: NA

Alternate protein names: Zinc Finger SWIM Domain-Containing Protein; Zinc Finger SWIM Domain Protein; Swim Zinc Finger Domain Protein; Zinc Finger SWIM-Type

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MEFNYNYKRNSRVSGQGNQAQMSFSPDLTREPTYFRGHLRQNIAFREAISALHDVVVSDLRFQPQDKTAYKAWAAQRDEI
DWQLVAAQRQEVTHKLQALQSELTDLHHRSSSRLAPFYRARQQYFDYLYRRDYDAWFVLDPVITVHPDEVFFECFSQDES
SYGRLGASYNVFDQVNEFACGTTNVDYSAALYDEFQKIRSYRQTLLEVDPSGFEVETTGMAAYKEVKIDLPDTWVRGFLQ
VSSAMALPAIQFDLHPMDIYNLCFALRRRREKHGPRSLRYHLTPGEPIRMVLEPWDQEIVCARSIYQGSKPEMVRVWGRR
RLLTLERLIPVARKFTVHLLGTGLPSFYVADLNDMSFTLGLSGWTANDWSRAGNFDLMAPRAQVDDWTKRQVFEALKQNW
VEAPATLAKRLGLDQSIVLGALSAYTQAGRAIYDLNQQVYRVRELARDPLPMDKLRFSNEREAQATRFLDQNAVRVSQSS
VDGKGTLLLQGTVQHRDKTFQPIVAIDRDERMVHGECTCNWHQQNKLFKGPCEHILALRMQHNRATS

Sequences:

>Translated_547_residues
MEFNYNYKRNSRVSGQGNQAQMSFSPDLTREPTYFRGHLRQNIAFREAISALHDVVVSDLRFQPQDKTAYKAWAAQRDEI
DWQLVAAQRQEVTHKLQALQSELTDLHHRSSSRLAPFYRARQQYFDYLYRRDYDAWFVLDPVITVHPDEVFFECFSQDES
SYGRLGASYNVFDQVNEFACGTTNVDYSAALYDEFQKIRSYRQTLLEVDPSGFEVETTGMAAYKEVKIDLPDTWVRGFLQ
VSSAMALPAIQFDLHPMDIYNLCFALRRRREKHGPRSLRYHLTPGEPIRMVLEPWDQEIVCARSIYQGSKPEMVRVWGRR
RLLTLERLIPVARKFTVHLLGTGLPSFYVADLNDMSFTLGLSGWTANDWSRAGNFDLMAPRAQVDDWTKRQVFEALKQNW
VEAPATLAKRLGLDQSIVLGALSAYTQAGRAIYDLNQQVYRVRELARDPLPMDKLRFSNEREAQATRFLDQNAVRVSQSS
VDGKGTLLLQGTVQHRDKTFQPIVAIDRDERMVHGECTCNWHQQNKLFKGPCEHILALRMQHNRATS
>Mature_547_residues
MEFNYNYKRNSRVSGQGNQAQMSFSPDLTREPTYFRGHLRQNIAFREAISALHDVVVSDLRFQPQDKTAYKAWAAQRDEI
DWQLVAAQRQEVTHKLQALQSELTDLHHRSSSRLAPFYRARQQYFDYLYRRDYDAWFVLDPVITVHPDEVFFECFSQDES
SYGRLGASYNVFDQVNEFACGTTNVDYSAALYDEFQKIRSYRQTLLEVDPSGFEVETTGMAAYKEVKIDLPDTWVRGFLQ
VSSAMALPAIQFDLHPMDIYNLCFALRRRREKHGPRSLRYHLTPGEPIRMVLEPWDQEIVCARSIYQGSKPEMVRVWGRR
RLLTLERLIPVARKFTVHLLGTGLPSFYVADLNDMSFTLGLSGWTANDWSRAGNFDLMAPRAQVDDWTKRQVFEALKQNW
VEAPATLAKRLGLDQSIVLGALSAYTQAGRAIYDLNQQVYRVRELARDPLPMDKLRFSNEREAQATRFLDQNAVRVSQSS
VDGKGTLLLQGTVQHRDKTFQPIVAIDRDERMVHGECTCNWHQQNKLFKGPCEHILALRMQHNRATS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63319; Mature: 63319

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFNYNYKRNSRVSGQGNQAQMSFSPDLTREPTYFRGHLRQNIAFREAISALHDVVVSDL
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RFQPQDKTAYKAWAAQRDEIDWQLVAAQRQEVTHKLQALQSELTDLHHRSSSRLAPFYRA
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RQQYFDYLYRRDYDAWFVLDPVITVHPDEVFFECFSQDESSYGRLGASYNVFDQVNEFAC
HHHHHHHHHHCCCCCEEEECCEEEECCHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHCC
GTTNVDYSAALYDEFQKIRSYRQTLLEVDPSGFEVETTGMAAYKEVKIDLPDTWVRGFLQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCHHHHHHHHH
VSSAMALPAIQFDLHPMDIYNLCFALRRRREKHGPRSLRYHLTPGEPIRMVLEPWDQEIV
HHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCHHH
CARSIYQGSKPEMVRVWGRRRLLTLERLIPVARKFTVHLLGTGLPSFYVADLNDMSFTLG
HHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCCEEEEE
LSGWTANDWSRAGNFDLMAPRAQVDDWTKRQVFEALKQNWVEAPATLAKRLGLDQSIVLG
ECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH
ALSAYTQAGRAIYDLNQQVYRVRELARDPLPMDKLRFSNEREAQATRFLDQNAVRVSQSS
HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCEECCCC
VDGKGTLLLQGTVQHRDKTFQPIVAIDRDERMVHGECTCNWHQQNKLFKGPCEHILALRM
CCCCEEEEEEECHHHCCCCCCCEEEECCCCCEEECCEEECCHHCCCCCCCHHHHHHHHHH
QHNRATS
HHCCCCC
>Mature Secondary Structure
MEFNYNYKRNSRVSGQGNQAQMSFSPDLTREPTYFRGHLRQNIAFREAISALHDVVVSDL
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RFQPQDKTAYKAWAAQRDEIDWQLVAAQRQEVTHKLQALQSELTDLHHRSSSRLAPFYRA
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RQQYFDYLYRRDYDAWFVLDPVITVHPDEVFFECFSQDESSYGRLGASYNVFDQVNEFAC
HHHHHHHHHHCCCCCEEEECCEEEECCHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHCC
GTTNVDYSAALYDEFQKIRSYRQTLLEVDPSGFEVETTGMAAYKEVKIDLPDTWVRGFLQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCHHHHHHHHH
VSSAMALPAIQFDLHPMDIYNLCFALRRRREKHGPRSLRYHLTPGEPIRMVLEPWDQEIV
HHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCHHH
CARSIYQGSKPEMVRVWGRRRLLTLERLIPVARKFTVHLLGTGLPSFYVADLNDMSFTLG
HHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCCEEEEE
LSGWTANDWSRAGNFDLMAPRAQVDDWTKRQVFEALKQNWVEAPATLAKRLGLDQSIVLG
ECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH
ALSAYTQAGRAIYDLNQQVYRVRELARDPLPMDKLRFSNEREAQATRFLDQNAVRVSQSS
HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCEECCCC
VDGKGTLLLQGTVQHRDKTFQPIVAIDRDERMVHGECTCNWHQQNKLFKGPCEHILALRM
CCCCEEEEEEECHHHCCCCCCCEEEECCCCCEEECCEEECCHHCCCCCCCHHHHHHHHHH
QHNRATS
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA